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FFCP PHASE1:Mm9::chr7:107756350..107756368,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19346
|EntrezGene=19346
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P35279
|UniProt=P35279
|association_with_transcript=146bp_to_ENSMUST00000098252_5end
|association_with_transcript=146bp_to_ENSMUST00000098252_5end
|cluster_id=chr7:107756350..107756368,+
|description=CAGE_peak_3_at_Rab6a_5end
|description=CAGE_peak_3_at_Rab6a_5end
|id=chr7:107756350..107756368,+
|id=chr7:107756350..107756368,+
|ontology_enrichment_celltype=CL:0002319!1.05e-15!43;CL:0000221!1.52e-15!44;CL:0000133!1.52e-15!44;CL:0000540!2.81e-15!33;CL:0000047!2.81e-15!33;CL:0000031!2.81e-15!33;CL:0000404!2.81e-15!33;CL:0000393!1.61e-13!39;CL:0000211!1.61e-13!39;CL:0000117!1.95e-13!23;CL:0000337!1.95e-13!23;CL:0000055!2.42e-13!50;CL:0002321!6.98e-08!70;CL:0000220!6.98e-08!70
|ontology_enrichment_celltype=CL:0002319!1.05e-15!43;CL:0000221!1.52e-15!44;CL:0000133!1.52e-15!44;CL:0000540!2.81e-15!33;CL:0000047!2.81e-15!33;CL:0000031!2.81e-15!33;CL:0000404!2.81e-15!33;CL:0000393!1.61e-13!39;CL:0000211!1.61e-13!39;CL:0000117!1.95e-13!23;CL:0000337!1.95e-13!23;CL:0000055!2.42e-13!50;CL:0002321!6.98e-08!70;CL:0000220!6.98e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000540,1.02e-16,33;CL:0000047,1.02e-16,33;CL:0000031,1.02e-16,33;CL:0000404,1.02e-16,33;CL:0002319,1.68e-16,43;CL:0000221,2.48e-16,44;CL:0000133,2.48e-16,44;CL:0000117,1.10e-14,23;CL:0000337,1.10e-14,23;CL:0000393,2.34e-14,39;CL:0000211,2.34e-14,39;CL:0002321,1.31e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.86e-31!75;UBERON:0001016!4.86e-31!75;UBERON:0001017!1.07e-30!73;UBERON:0005743!1.07e-30!73;UBERON:0004121!1.81e-28!102;UBERON:0000924!1.81e-28!102;UBERON:0006601!1.81e-28!102;UBERON:0002346!9.39e-24!71;UBERON:0003075!9.39e-24!71;UBERON:0007284!9.39e-24!71;UBERON:0000033!1.47e-22!63;UBERON:0001049!2.10e-22!52;UBERON:0005068!2.10e-22!52;UBERON:0006241!2.10e-22!52;UBERON:0007135!2.10e-22!52;UBERON:0000955!8.57e-21!50;UBERON:0006238!8.57e-21!50;UBERON:0002616!2.75e-20!49;UBERON:0002020!1.07e-18!34;UBERON:0003056!3.36e-18!49;UBERON:0003080!1.74e-16!40;UBERON:0002780!6.62e-16!39;UBERON:0001890!6.62e-16!39;UBERON:0006240!6.62e-16!39;UBERON:0002791!1.98e-15!29;UBERON:0003528!1.98e-15!29;UBERON:0001893!1.98e-15!29;UBERON:0000956!3.61e-11!21;UBERON:0001869!3.61e-11!21;UBERON:0000203!3.61e-11!21;UBERON:0007811!1.81e-09!86;UBERON:0002619!3.64e-09!17;UBERON:0000153!5.11e-09!94;UBERON:0002021!5.70e-08!10;UBERON:0000411!5.70e-08!10;UBERON:0001950!5.70e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.05e-33,75;UBERON:0001017,1.72e-32,73;UBERON:0004121,2.57e-30,95;UBERON:0000924,2.57e-30,95;UBERON:0006601,2.57e-30,95;UBERON:0002346,1.52e-26,64;UBERON:0003075,1.52e-26,64;UBERON:0007284,1.52e-26,64;UBERON:0000073,9.20e-25,54;UBERON:0001049,2.31e-23,52;UBERON:0005068,2.31e-23,52;UBERON:0006241,2.31e-23,52;UBERON:0007135,2.31e-23,52;UBERON:0010371,4.41e-22,73;UBERON:0002020,4.00e-20,34;UBERON:0000955,1.39e-19,47;UBERON:0006238,1.39e-19,47;UBERON:0003056,3.31e-19,49;UBERON:0002616,4.81e-19,46;UBERON:0003080,2.75e-17,40;UBERON:0002780,1.19e-16,39;UBERON:0001890,1.19e-16,39;UBERON:0006240,1.19e-16,39;UBERON:0003528,1.61e-16,29;UBERON:0002791,1.61e-16,29;UBERON:0001893,1.61e-16,29;UBERON:0010314,1.67e-16,92;UBERON:0000956,7.98e-12,21;UBERON:0001869,7.98e-12,21;UBERON:0000203,7.98e-12,21;UBERON:0002619,1.29e-09,17;UBERON:0002021,1.20e-08,10;UBERON:0000411,1.20e-08,10;UBERON:0001950,1.20e-08,10
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|phase1_expression=4.48416771893423,2.09385244583617,0.909998478779072,3.32710632437513,1.00179145989269,1.00727563147134,0.233612640595526,0.774739940649458,2.111830832275,2.80877431586392,0.513653904676515,0.398860794976682,0.342401459862411,0.174840804837995,0,0.607425802169478,0,0.157731082679119,0,0,3.48677489619386,0.198581902401771,0.261199789138935,0.319984845586813,0.68822784320151,1.14846392823004,1.7230479846363,0.861884930743556,1.33016393619462,1.00812051903972,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0,1.25559489221072,0.7813353445238,1.57057123192139,2.35292595212406,2.04913645487534,1.45653105909346,0.755380907853464,0.608261587317087,2.56965453026354,4.69434806608824,0.872100625521786,1.75748946187577,0.777719596297134,1.81982348112971,2.87505128729943,0,1.45072428402269,2.01656279485478,1.54355661621568,1.71920063963254,1.03134418455488,12.3413041124355,22.7466121086974,13.3104594736298,3.38844532069132,2.66788438833342,1.3498495759221,0.988866362566974,1.4209602298922,3.59520132622086,5.37905627450176,5.59923906465779,6.88530285491622,6.94072372459561,34.2781181284564,22.5285911770646,5.51208596467293,6.03826467414889,3.67687514644008,12.1127469099328,23.6221575457597,20.1224558565679,16.2220133908138,15.4614117688072,14.0646610050325,19.821992929098,7.31591393041184,11.7654650788144,23.8649154233671,23.0642122894547,16.0303523409758,1.81742863999642,3.17400552448499,0.579728977403356,0,2.03991400112325,0,1.94932925234301,1.79210754838934,0.561777680527007,1.02258193546835,0,1.06001872353102,1.40843419776681,0,2.54805239706646,0,0.865964164044856,0.506719730950197,0.505524445014783,1.7127581957859,0.258937883647172,0.29688427812965,1.73485326766136,1.82679286987285,2.53677046981664,2.26083960828934,1.88141931417128,0.376999773989026,2.22475470960936,0.578397427679647,0.884610551949874,1.13236794963186,0.441683036920787,0,0,5.27005434620785,4.39838084308256,1.27728527604296,0.479260498023681,0,0.889491589511453,16.7765516133401,16.4700217014706,8.67015029578764,25.2045264278801,26.0829766476937,20.3632283668369,15.2506787283692,1.01839363850316,0.373220911830279,0.758168275301024,2.10441855886474,1.30120442962704,3.44853156650209,2.88099407688559,2.86339153887859,2.99360596265843,3.07472928683639,2.99845518591132,4.9153640440413,1.72454394346274,1.70195472151037,2.63926686245923,1.31517439456545,1.94633074457919,0.696504333044333,0.823128545631774,0.59710280045548,0,0.51469581422943,0.568326998791185,1.65700618028402,0.469052119962192,1.08037236876609,0.710234206755631,0.393528463494808,0.925602677324269,0.232533944750408,0.536546802799238,0.583826711835847,0.493679549740441,0.32833492815819,0.891756905004413,0.438599962275997,0.219550115291051,0,19.9775451135921,11.216602749342,4.62586296177317,0.793351699990633,0.853153002140936,2.09013004674395,0.515469845288373,1.00841762311671,1.11189021922435,1.33157938278791,0.474529061544512,0.988193728344065,1.25667604400135,0.596869416123452,1.16978452271472,1.79763881730844,1.51296634912286,1.39398891278057,0.758671603812327,0.913988100877831,1.1270773567308,0.814605311381257,0.387904974335251,0.98190147846446,0.379419222745544,0.147610147979602,0.627994911365499,0.370191491765402,0.296452627087149,0.667380422864376,0.393117990226406,0.674586337154561,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,1.43768206527355,1.48856379067401,0.936113019343682,0.505157755894224,0.896987067609561,0.964887042726734,0.923765950833023,0.757965647081939,0.814824882210129,0.169745085775188,0,0,0.714130922658041,0.975668239288994,0.788175720530955,0.221464689648775,0.478364305972461,0.327726629431476,0.518054945597687,0.144649058581512,0,0.54390568381871,2.45882136509518,0.827810238914197,18.4633178485961,14.5342491374332,0.655739781506702,0,2.52406575533005,3.51394869866975,3.87762115919038,2.86762557543062,1.11399337041197,3.39691836946599,2.83367491172426,3.79932615284705,3.16230222357219,5.78378369559253,0.851640511249612,0.35613120733451,0.977321756121456,0.329940245945071,0,0.971122544619926,0.604647113929502,0.188605079755898,1.18120757152309,0,0.516856586336442,1.09060118843252,0,0,0,0,1.02131881726136,2.16073312837572,1.03486947026204,2.57204442037911,2.48276327099183,3.0322698992352,3.1264313914403,0.913394847343798,1.64270195644597,1.48282449604674,1.10264199027481,0.49465875882444,0.645857706783622,0.603129249281559,0.477489376012546,0.656563598980245,0.291480836629851,19.284231409093,0.683483523191411,0.412773735926445,0.185194527369712,0,0.136694227721025,0.686334519619568,0.679913719975421,0.839708713941948,0.552799895217695,1.90934123603023,1.42351197111511,0.609958401380546,1.08005340821801,0.418176592028937,0.655087691238533,0.134864346384821,0.991841468704031,0.26175594198403,0.777689839750757,1.24267862617385,9.01908701894705,1.49516546043979,1.15820943319968,1.55560950675238,1.29159823477731,1.35164900392623,1.05621514781179,1.43224823328345,1.67774951081137,4.83168241652012,4.03242008761012,0,0.608175645870493,0.308132871494482,0.129920822977795,0.716106782669926,0.596044064343795,0,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.292373642219257,0.288635524920988,0,1.36038230169127,1.33191572024439,0.717710852875806,1.00730769818447,0.965947970160952,0,0,0.857473516316263,0.501572104035363,36.7088697701093,28.540164663445,30.9363577257274,30.4180132748327,24.6629707117431,17.3740596399631,23.6257875081132,26.568950990229,22.203978040226,26.4057758993428,3.32119512269365,1.59609949360412,2.21953687480374,1.70174701947806,3.77303692730368,5.51530525350042,3.55594764482584,3.09052585858341,2.88827288632634,4.29585259998456,4.81610669791456,3.58390048633545,2.34103768674706,2.75308155340938,3.15895079255873,3.33405583898152,3.1288768005111,1.92909220463705,3.29668720642645,4.56316652416632,3.77156177623957,1.95223386775271,3.57654284920981,3.34296758254356,4.23492211868988,2.79228206042532,2.92684756596436,2.10455769150274,3.12349461845482,2.24456908663095,2.84724043498018,2.46261205938909,2.04615521584845,2.94379998253335,2.3148793317737,5.49583271463481,3.50897412668113,2.57845264857958,3.44318997723918,2.20591419119516,2.08681052058379
|short_description=p3@Rab6a
|short_description=p3@Rab6a
}}
}}

Latest revision as of 14:53, 25 September 2015

Short description:p3@Rab6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rab6a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 146bp_to_ENSMUST00000098252_5end
EntrezGene:Rab6a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rab6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C312.34
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.60
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F134.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.06
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.03
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A416.78
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F18.67
cortex, adult.CNhs10473.12-14D525.20
cortex, neonate N30.CNhs11107.1392-42F226.08
diencephalon, adult.CNhs10482.20-12F220.36
diencephalon, neonate N30.CNhs11201.1388-42B215.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.98
hippocampus, neonate N00.CNhs11228.627-43G111.22
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C218.46
medulla oblongata, neonate N30.CNhs11200.1396-42A314.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C919.28
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A424.66
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A623.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I83.32
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.02e-1633
neuronal stem cell1.02e-1633
neuroblast1.02e-1633
electrically signaling cell1.02e-1633
neural cell1.68e-1643
ectodermal cell2.48e-1644
neurectodermal cell2.48e-1644
CNS neuron (sensu Vertebrata)1.10e-1423
neuroblast (sensu Vertebrata)1.10e-1423
electrically responsive cell2.34e-1439
electrically active cell2.34e-1439
embryonic cell1.31e-0870

Uber anatomy
Ontology termp-valuen
nervous system7.05e-3375
central nervous system1.72e-3273
ectoderm-derived structure2.57e-3095
ectoderm2.57e-3095
presumptive ectoderm2.57e-3095
neurectoderm1.52e-2664
neural plate1.52e-2664
presumptive neural plate1.52e-2664
regional part of nervous system9.20e-2554
neural tube2.31e-2352
neural rod2.31e-2352
future spinal cord2.31e-2352
neural keel2.31e-2352
ecto-epithelium4.41e-2273
gray matter4.00e-2034
brain1.39e-1947
future brain1.39e-1947
pre-chordal neural plate3.31e-1949
regional part of brain4.81e-1946
anterior neural tube2.75e-1740
regional part of forebrain1.19e-1639
forebrain1.19e-1639
future forebrain1.19e-1639
brain grey matter1.61e-1629
regional part of telencephalon1.61e-1629
telencephalon1.61e-1629
structure with developmental contribution from neural crest1.67e-1692
cerebral cortex7.98e-1221
cerebral hemisphere7.98e-1221
pallium7.98e-1221
regional part of cerebral cortex1.29e-0917
occipital lobe1.20e-0810
visual cortex1.20e-0810
neocortex1.20e-0810
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