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FFCP PHASE1:Mm9::chr9:45714452..45714520,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=235315
|EntrezGene=235315
|HGNC=
|HGNC=
|MCL_coexpression_id=321
|TSSclassifier=NA
|UniProt=E0CZF4,Q8BFU3
|UniProt=E0CZF4,Q8BFU3
|association_with_transcript=0bp_to_ENSMUST00000160811,ENSMUST00000161187,ENSMUST00000162369_5end
|association_with_transcript=0bp_to_ENSMUST00000160811,ENSMUST00000161187,ENSMUST00000162369_5end
|cluster_id=chr9:45714452..45714520,-
|description=CAGE_peak_1_at_Rnf214_5end
|description=CAGE_peak_1_at_Rnf214_5end
|id=chr9:45714452..45714520,-
|id=chr9:45714452..45714520,-
|ontology_enrichment_celltype=CL:0000540!3.60e-14!33;CL:0000047!3.60e-14!33;CL:0000031!3.60e-14!33;CL:0000404!3.60e-14!33;CL:0000117!1.68e-13!23;CL:0000337!1.68e-13!23;CL:0000393!5.32e-10!39;CL:0000211!5.32e-10!39;CL:0002319!1.00e-07!43;CL:0000221!1.79e-07!44;CL:0000133!1.79e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000540,3.60e-14,33;CL:0000047,3.60e-14,33;CL:0000031,3.60e-14,33;CL:0000404,3.60e-14,33;CL:0000117,1.68e-13,23;CL:0000337,1.68e-13,23;CL:0000393,5.32e-10,39;CL:0000211,5.32e-10,39;CL:0002319,1.00e-07,43;CL:0000221,1.79e-07,44;CL:0000133,1.79e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.33e-21!71;UBERON:0003075!2.33e-21!71;UBERON:0007284!2.33e-21!71;UBERON:0001017!3.01e-20!73;UBERON:0005743!3.01e-20!73;UBERON:0000033!5.42e-20!63;UBERON:0004121!2.07e-19!102;UBERON:0000924!2.07e-19!102;UBERON:0006601!2.07e-19!102;UBERON:0000073!5.54e-19!75;UBERON:0001016!5.54e-19!75;UBERON:0003056!4.16e-18!49;UBERON:0001049!5.24e-18!52;UBERON:0005068!5.24e-18!52;UBERON:0006241!5.24e-18!52;UBERON:0007135!5.24e-18!52;UBERON:0000955!1.68e-17!50;UBERON:0006238!1.68e-17!50;UBERON:0002616!4.97e-17!49;UBERON:0003080!4.20e-14!40;UBERON:0002780!1.71e-13!39;UBERON:0001890!1.71e-13!39;UBERON:0006240!1.71e-13!39;UBERON:0002020!4.37e-13!34;UBERON:0000468!1.20e-11!333;UBERON:0000153!2.97e-11!94;UBERON:0002791!4.10e-11!29;UBERON:0003528!4.10e-11!29;UBERON:0001893!4.10e-11!29;UBERON:0000025!3.95e-10!114;UBERON:0007811!6.68e-10!86;UBERON:0000922!2.80e-09!328;UBERON:0004111!6.07e-09!122;UBERON:0000956!4.52e-07!21;UBERON:0001869!4.52e-07!21;UBERON:0000203!4.52e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.27e-23,64;UBERON:0003075,3.27e-23,64;UBERON:0007284,3.27e-23,64;UBERON:0010314,1.99e-21,92;UBERON:0004121,2.09e-20,95;UBERON:0000924,2.09e-20,95;UBERON:0006601,2.09e-20,95;UBERON:0001017,3.01e-20,73;UBERON:0010371,5.40e-20,73;UBERON:0000073,3.52e-19,54;UBERON:0001016,5.54e-19,75;UBERON:0003056,4.16e-18,49;UBERON:0001049,5.24e-18,52;UBERON:0005068,5.24e-18,52;UBERON:0006241,5.24e-18,52;UBERON:0007135,5.24e-18,52;UBERON:0000955,7.26e-16,47;UBERON:0006238,7.26e-16,47;UBERON:0002616,2.10e-15,46;UBERON:0003080,4.20e-14,40;UBERON:0002780,1.71e-13,39;UBERON:0001890,1.71e-13,39;UBERON:0006240,1.71e-13,39;UBERON:0002020,4.37e-13,34;UBERON:0003528,4.10e-11,29;UBERON:0002791,4.10e-11,29;UBERON:0001893,4.10e-11,29;UBERON:0000025,3.95e-10,114;UBERON:0000922,3.81e-09,320;UBERON:0004111,6.07e-09,122;UBERON:0000956,4.52e-07,21;UBERON:0001869,4.52e-07,21;UBERON:0000203,4.52e-07,21
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|phase1_expression=7.36684696682052,3.48975407639361,3.18499467572675,5.74682001482977,3.00537437967808,5.70789524500425,3.50418960893289,4.9066862907799,0.422366166455,0.468129052643987,3.4243593645101,3.5099749957948,3.76641605848653,3.58423649917889,5.3297561890506,4.656931149966,6.99561878128147,7.25562980323947,8.08975158273859,4.66828616977833,8.41928572495591,4.56738375524072,3.13439746966722,3.67982572424835,2.98232065387321,2.29692785646008,3.4460959692726,3.44753972297422,5.13063232532209,6.5527833737582,2.43903561720835,3.17515336729816,3.07532393792285,0,3.46621943701529,2.99222361645286,4.08338712524738,6.69650609179052,4.6880120671428,8.89990364755457,12.3528612486513,8.87959130445979,5.34061388334269,5.03587271902309,5.5757312170733,5.13930906052708,9.38869613217647,6.32272953503295,3.95435128922049,7.38833616482277,5.73944328663986,4.31257693094915,3.02008690903925,1.45072428402269,3.6970317905671,6.94600477297057,7.44986943840768,5.15672092277442,27.3127222160457,22.7466121086974,20.9164363157039,4.40497891689872,5.33576877666684,4.94944844504769,1.97773272513395,2.8419204597844,2.69640099466564,4.61061966385865,27.1666784248211,27.1361936046698,26.0802952075714,15.996455126613,11.0434270475807,29.5202826108039,29.0411777185256,22.9804696652505,16.5173821499083,23.7498448838449,20.8904885228491,31.5208227675163,37.0524956589759,31.2548022334056,12.2840519560608,18.0084035210138,20.4749652020926,19.1508580557884,19.6472919502762,24.4183274031144,4.01348824665875,7.3304413303582,8.69593466105033,2.58127163094416,2.719885334831,5.39703191637817,4.54843492213368,2.24013443548668,6.74133216632409,4.60161870960756,1.29893002301434,2.47337702157238,7.74638808771743,1.28326477414318,10.1922095882658,7.11066703153331,4.76280290224671,6.58735650235256,5.05524445014783,5.02409070763864,11.3932668804756,8.90652834388949,9.1947223186052,8.22056791442781,7.37969591219387,9.19408107370998,12.5819916635204,7.91699525376955,7.91023896749996,12.7247434089522,3.5384422077995,8.25010934731787,6.62524555381181,9.69750506270444,3.72783522436244,19.6163133997737,20.9446706813455,9.19645398750929,2.99537811264801,3.59941638596045,3.04968544975355,24.2660835835813,17.8425235099264,28.2722292253945,16.8609590586508,17.6443665557928,18.2853479212413,23.5249831448249,13.850153483643,7.71323217782577,5.55990068554084,14.5204880561667,17.9566211288531,14.4838325793088,17.2859644613135,20.1944455899858,21.9757892258789,19.0889443224426,18.5529414628263,12.6764651662118,17.0298714416945,21.3689870589636,16.8913079197391,9.20622076195814,12.7901734643775,9.75106066262066,9.26019613835746,15.5246728118425,2.1066395619397,2.83082697826187,4.26245249093389,12.2204205795946,14.0715635988658,13.8647787324981,12.0739815148457,12.7896750635812,13.884040159864,12.3242990717716,12.8771232671817,12.0268302638185,13.9875872426458,13.6258995185649,9.97146357414026,8.33339928324394,10.9775057645525,9.79706856950714,21.2392848049769,27.7842453424068,9.58214470653014,3.96675849995316,18.5560777965654,16.953277045812,9.27845721519072,10.8909103296605,8.2279876222602,4.94586627892654,5.21981967698963,7.5761519173045,8.04272668160862,9.54991065797524,7.40863531052657,3.59527763461689,6.70027954611552,6.77080329064848,11.9490777600441,12.5673363870702,10.1436962105772,10.997171703647,11.4431967428899,13.3258057791605,12.3943612763544,6.9376769550413,5.18095801876537,7.89741849099523,7.11486305009157,7.34118465150814,6.2898878436225,3.59779379815766,6.49152388443209,6.51178331331525,5.34714288740982,6.61701116136864,4.21551589615092,5.76578967694971,27.3159592401974,7.81495990103857,5.92871578917665,8.08252409430758,5.38192240565737,5.78932225636041,13.3022296919955,10.6115190591471,14.5038829033403,14.428332290891,15.0201758904641,12.3954630506944,9.04565835366852,10.3420833364633,14.029527825451,13.5093460685753,13.5536553358864,11.9620219742489,8.28887912956299,8.38964539772767,1.50791283939272,7.07077388964322,4.42587845717133,8.82997588175144,20.7110261084252,20.1604100938589,4.91804836130026,6.81671503451807,17.0374438484779,11.7131623288992,15.0796378412959,13.1432838873904,15.5959071857676,15.286132662597,14.9779959619711,9.64444331107329,9.88219444866309,17.0300297703558,11.7810270722863,12.4645922567079,14.0082785044075,12.0428189769951,2.65490276679926,7.76898035695941,9.37203026590728,7.16699303072413,6.496641643377,9.53048958626175,7.75284879504663,8.72480950746013,8.91243445961803,6.0046984007805,11.5960469432499,5.15677716240934,13.9580238359053,16.3855595568492,11.3835641728824,13.7175702420219,15.4286003268778,12.8425548673491,13.4930196893739,8.82948352432338,6.57080782578389,6.99045833850607,5.29268155331909,9.39851641766436,9.84933002845024,9.77069383836125,9.43041517624778,6.89391778929257,6.99554007911642,17.6154036909984,4.44264290074417,11.3512777379772,8.51894825900674,5.65105371014073,7.38148829693536,6.86334519619568,4.24946074984638,4.19854356970974,4.00779924032829,5.72802370809068,14.7096237015228,12.1991680276109,9.93649135560572,9.61806161666556,9.17122767733946,9.30563990055263,8.76126630688561,4.18809507174447,7.90651337079936,6.21339313086926,5.6369293868419,14.8021380583539,10.2584264083401,14.1949367491155,12.9159823477731,15.20605129417,15.9605844558225,16.5359568751817,13.7365741197681,5.55643477899814,6.91272015018877,6.00421129193539,10.1362607645082,7.70332178736204,6.62596197186755,9.84646826171148,5.36439657909415,6.61074972359829,5.46451250545936,9.08698049533329,8.61136915201498,8.57022573663144,7.69917257844044,7.60073548958603,7.48012173962041,10.8830584135301,5.32766288097755,3.49884040776955,3.02192309455341,9.46629010757733,5.44279178808428,9.34073283763052,5.57357785605571,9.02829787263654,16.942555278512,13.8097570952153,13.7494923225455,12.8889886757766,16.4419804744954,11.3309084608455,10.8003600037089,12.158672487054,14.0474146785103,20.7104124700728,22.314279730598,17.5570944296454,16.0489589408886,11.4260157022098,10.2710449687711,11.7659845408009,12.8903102124937,11.1258930909003,10.9112531261217,8.59170519996911,14.7017993936339,10.9403278003924,11.7988299412052,12.6129550237592,11.3147873842558,11.9073422820768,17.4985332176732,13.5036454324594,8.65380391686944,9.86232764900462,11.3146853287187,9.40621772644489,10.9680647375768,13.2265239135419,10.822578747763,11.6768158890514,12.073246209603,13.41655528333,11.2717414492065,15.7119836064167,10.914421667424,13.2981051207011,7.7753898202241,10.3807683594597,8.68079749415136,10.2422336954558,9.82512755470715,12.0327790267047,12.6250299165437,8.82365676478062,7.18790290423307
|short_description=p1@Rnf214
|short_description=p1@Rnf214
}}
}}

Latest revision as of 17:53, 26 September 2015

Short description:p1@Rnf214
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf214_5end
Coexpression cluster:MCL_coexpression_mm9:321
Association with transcript: 0bp_to_ENSMUST00000160811, ENSMUST00000161187, ENSMUST00000162369_5end
EntrezGene:Rnf214
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf214

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.09
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B95.13
Ileum epithelium, pool2.CNhs13232.10253-104C16.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.32
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.02
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C327.31
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.17
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D926.08
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.52
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D431.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.42
Mouse Schwann, donor1.CNhs12507.11728-123D94.01
Mouse Schwann, donor2.CNhs12573.11746-123F97.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D78.91
adrenal gland, embryo E14.CNhs11038.406-44C59.19
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F59.19
adrenal gland, neonate N00.CNhs11191.1311-23C112.58
adrenal gland, neonate N25.CNhs11223.1377-27I37.92
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H112.72
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F58.25
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C39.70
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I220.94
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A424.27
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F128.27
cortex, adult.CNhs10473.12-14D516.86
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F218.29
diencephalon, neonate N30.CNhs11201.1388-42B223.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.71
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C617.96
eyeball, embryo E14.CNhs10521.399-16E214.48
eyeball, embryo E15.CNhs10593.426-16C917.29
eyeball, embryo E17.CNhs11023.1261-18D420.19
eyeball, neonate N00.CNhs11207.633-15C621.98
eyeball, neonate N01.CNhs11140.1532-43E719.09
eyeball, neonate N02.CNhs11205.1551-44G818.55
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E217.03
forelimb, embryo E12.CNhs10600.359-14H221.37
forelimb, embryo E13.CNhs10589.384-1E216.89
forelimb, embryo E14.CNhs10577.413-26A89.21
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B59.26
gonad, embryo E13.CNhs11044.1564-45I615.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E912.22
heart, embryo E12.CNhs11015.353-12F514.07
heart, embryo E13.CNhs11013.376-3I913.86
heart, embryo E14.CNhs10597.403-26D412.07
heart, embryo E15.CNhs11017.431-16C812.79
heart, embryo E16.CNhs11021.457-17C613.88
heart, embryo E17.CNhs11025.479-18E512.32
heart, embryo E18.CNhs11030.1283-20G312.88
heart, neonate N00.CNhs11213.639-21E312.03
heart, neonate N03.CNhs11221.1349-25I213.99
heart, neonate N10.CNhs11118.749-24G113.63
heart, neonate N16.CNhs11209.782-15G19.97
heart, neonate N20.CNhs11127.821-26I68.33
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D29.80
hippocampus, adult.CNhs10478.13-16E821.24
hippocampus, neonate N00.CNhs11228.627-43G127.78
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I518.56
intestine, embryo E13.CNhs11010.381-16D516.95
intestine, embryo E15.CNhs10602.976-16D89.28
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E97.58
intestine, neonate N06.CNhs11102.688-20B88.04
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E36.70
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I911.95
kidney, embryo E15.CNhs10997.434-16F812.57
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I211.00
kidney, embryo E18.CNhs11001.1288-20C711.44
kidney, neonate N00.CNhs11214.646-21G713.33
kidney, neonate N10.CNhs11206.758-6D512.39
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F35.18
kidney, neonate N30.CNhs11203.1385-42H17.90
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H66.29
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B113.30
lung, embryo E12.CNhs10522.354-16G210.61
lung, embryo E14.CNhs10604.404-26F814.50
lung, embryo E15.CNhs11020.432-17C514.43
lung, embryo E16.CNhs10998.458-17B615.02
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I69.05
lung, neonate N00.CNhs11224.640-42C610.34
lung, neonate N06.CNhs11212.683-20E514.03
lung, neonate N07.CNhs11111.715-19A313.51
lung, neonate N10.CNhs11219.750-23E613.55
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H28.83
medulla oblongata, adult.CNhs10477.17-12C220.71
medulla oblongata, neonate N30.CNhs11200.1396-42A320.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.14
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.29
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I711.78
ovary, embryo E18.CNhs11040.505-44H712.46
ovary, neonate N00.CNhs11217.1299-22I414.01
oviduct, adult pregnant day01.CNhs10500.988-6G612.04
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F29.37
pancreas, embryo E16.CNhs11003.460-26E57.17
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G813.96
pituitary gland, embryo E12.CNhs11018.346-16E616.39
pituitary gland, embryo E13.CNhs11009.370-44C711.38
pituitary gland, embryo E14.CNhs11037.398-44A513.72
pituitary gland, embryo E15.CNhs10592.427-16B915.43
pituitary gland, embryo E16.CNhs11036.449-43F612.84
pituitary gland, embryo E17.CNhs11039.1265-44F513.49
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G49.85
skin, neonate N03.CNhs11215.662-22H39.77
skin, neonate N06.CNhs11097.693-20I59.43
skin, neonate N10.CNhs11108.762-6C46.89
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C917.62
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F28.52
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H17.38
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E314.71
stomach, embryo E15.CNhs10603.1252-16G812.20
stomach, embryo E16.CNhs11022.459-17D49.94
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B89.31
stomach, neonate N07.CNhs11210.718-18A98.76
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I17.91
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F514.80
testis, embryo E15.CNhs11034.443-27C510.26
testis, embryo E16.CNhs11033.470-26G514.19
testis, embryo E17.CNhs11029.486-18I512.92
testis, embryo E18.CNhs11027.503-18G515.21
testis, neonate N00.CNhs11189.1300-22B715.96
testis, neonate N07.CNhs11222.726-26I416.54
testis, neonate N10.CNhs11204.763-44D913.74
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I410.14
thymus, embryo E15.CNhs11005.430-45I27.70
thymus, embryo E16.CNhs11002.456-26C56.63
thymus, embryo E17.CNhs10581.478-18C19.85
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F86.61
thymus, neonate N03.CNhs11137.2104-43C75.46
thymus, neonate N06.CNhs11197.681-26C49.09
thymus, neonate N07.CNhs11211.713-19D38.61
thymus, neonate N10.CNhs11194.748-24E48.57
thymus, neonate N20.CNhs11186.820-7A27.70
thymus, neonate N25.CNhs11125.1362-25G77.60
thymus, neonate N30.CNhs11132.1393-42G27.48
tongue, adult.CNhs10499.32-1B410.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I822.31
whole body, embryo E12.CNhs10587.857-27C917.56
whole body, embryo E13.CNhs10512.372-23H216.05
whole body, embryo E14.5.CNhs10578.420-27D211.43
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F211.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.50
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.38
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B39.83
whole body, neonate N00.CNhs10525.657-19C212.03
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D18.82
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.60e-1433
neuronal stem cell3.60e-1433
neuroblast3.60e-1433
electrically signaling cell3.60e-1433
CNS neuron (sensu Vertebrata)1.68e-1323
neuroblast (sensu Vertebrata)1.68e-1323
electrically responsive cell5.32e-1039
electrically active cell5.32e-1039
neural cell1.00e-0743
ectodermal cell1.79e-0744
neurectodermal cell1.79e-0744

Uber anatomy
Ontology termp-valuen
neurectoderm3.27e-2364
neural plate3.27e-2364
presumptive neural plate3.27e-2364
structure with developmental contribution from neural crest1.99e-2192
ectoderm-derived structure2.09e-2095
ectoderm2.09e-2095
presumptive ectoderm2.09e-2095
central nervous system3.01e-2073
ecto-epithelium5.40e-2073
regional part of nervous system3.52e-1954
nervous system5.54e-1975
pre-chordal neural plate4.16e-1849
neural tube5.24e-1852
neural rod5.24e-1852
future spinal cord5.24e-1852
neural keel5.24e-1852
brain7.26e-1647
future brain7.26e-1647
regional part of brain2.10e-1546
anterior neural tube4.20e-1440
regional part of forebrain1.71e-1339
forebrain1.71e-1339
future forebrain1.71e-1339
gray matter4.37e-1334
brain grey matter4.10e-1129
regional part of telencephalon4.10e-1129
telencephalon4.10e-1129
tube3.95e-10114
embryo3.81e-09320
anatomical conduit6.07e-09122
cerebral cortex4.52e-0721
cerebral hemisphere4.52e-0721
pallium4.52e-0721
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