FFCP PHASE1:Mm9::chr1:123327705..123327729,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70829 | |EntrezGene=70829 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=E9QAD4 | |UniProt=E9QAD4 | ||
|association_with_transcript=18bp_to_ENSMUST00000112621_5end | |association_with_transcript=18bp_to_ENSMUST00000112621_5end | ||
|cluster_id=chr1:123327705..123327729,+ | |||
|description=CAGE_peak_2_at_Ccdc93_5end | |description=CAGE_peak_2_at_Ccdc93_5end | ||
|id=chr1:123327705..123327729,+ | |id=chr1:123327705..123327729,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.89e-10!32;CL:0002032!2.89e-10!32;CL:0000037!2.89e-10!32;CL:0000566!2.89e-10!32;CL:0000837!2.89e-10!32;CL:0002031!8.64e-09!25;CL:0002320!1.58e-08!46;CL:0000134!1.58e-08!46;CL:0000838!3.44e-07!12;CL:0000063!5.58e-07!66 | |ontology_enrichment_celltype=CL:0000988!2.89e-10!32;CL:0002032!2.89e-10!32;CL:0000037!2.89e-10!32;CL:0000566!2.89e-10!32;CL:0000837!2.89e-10!32;CL:0002031!8.64e-09!25;CL:0002320!1.58e-08!46;CL:0000134!1.58e-08!46;CL:0000838!3.44e-07!12;CL:0000063!5.58e-07!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.14e-12,32;CL:0002032,8.14e-12,32;CL:0000037,8.14e-12,32;CL:0000837,8.14e-12,32;CL:0002031,3.19e-10,25;CL:0002320,2.43e-09,46;CL:0000134,2.43e-09,46;CL:0000838,5.66e-08,12;CL:0000084,1.98e-07,11;CL:0000827,1.98e-07,11;CL:0000791,4.99e-07,9;CL:0000789,4.99e-07,9;CL:0002420,4.99e-07,9;CL:0002419,4.99e-07,9;CL:0000790,4.99e-07,9;CL:0000542,6.45e-07,13;CL:0000051,6.45e-07,13;CL:0000219,6.51e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.43e-14!48;UBERON:0002390!9.11e-13!45;UBERON:0003061!9.11e-13!45;UBERON:0002405!2.66e-10!70;UBERON:0004177!3.55e-09!29;UBERON:0002384!1.58e-08!46;UBERON:0002370!6.26e-08!23;UBERON:0000974!6.26e-08!23;UBERON:0004807!6.26e-08!23;UBERON:0005058!6.26e-08!23;UBERON:0003351!6.26e-08!23;UBERON:0009113!6.26e-08!23;UBERON:0003295!6.26e-08!23;UBERON:0009722!6.26e-08!23;UBERON:0005562!6.26e-08!23;UBERON:0007690!6.26e-08!23;UBERON:0003081!9.67e-08!88;UBERON:0003408!2.63e-07!24;UBERON:0000490!2.78e-07!66;UBERON:0006562!3.59e-07!24;UBERON:0001557!3.59e-07!24;UBERON:0001042!3.59e-07!24;UBERON:0008814!3.59e-07!24;UBERON:0009145!3.59e-07!24;UBERON:0004119!4.06e-07!130;UBERON:0000925!4.06e-07!130;UBERON:0006595!4.06e-07!130;UBERON:0001007!8.60e-07!128;UBERON:0001555!8.60e-07!128;UBERON:0007026!8.60e-07!128 | |ontology_enrichment_uberon=UBERON:0002193!6.43e-14!48;UBERON:0002390!9.11e-13!45;UBERON:0003061!9.11e-13!45;UBERON:0002405!2.66e-10!70;UBERON:0004177!3.55e-09!29;UBERON:0002384!1.58e-08!46;UBERON:0002370!6.26e-08!23;UBERON:0000974!6.26e-08!23;UBERON:0004807!6.26e-08!23;UBERON:0005058!6.26e-08!23;UBERON:0003351!6.26e-08!23;UBERON:0009113!6.26e-08!23;UBERON:0003295!6.26e-08!23;UBERON:0009722!6.26e-08!23;UBERON:0005562!6.26e-08!23;UBERON:0007690!6.26e-08!23;UBERON:0003081!9.67e-08!88;UBERON:0003408!2.63e-07!24;UBERON:0000490!2.78e-07!66;UBERON:0006562!3.59e-07!24;UBERON:0001557!3.59e-07!24;UBERON:0001042!3.59e-07!24;UBERON:0008814!3.59e-07!24;UBERON:0009145!3.59e-07!24;UBERON:0004119!4.06e-07!130;UBERON:0000925!4.06e-07!130;UBERON:0006595!4.06e-07!130;UBERON:0001007!8.60e-07!128;UBERON:0001555!8.60e-07!128;UBERON:0007026!8.60e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.42e-17,48;UBERON:0002405,5.42e-17,48;UBERON:0002390,1.18e-15,45;UBERON:0003061,1.18e-15,45;UBERON:0004177,1.32e-11,29;UBERON:0005057,1.32e-11,29;UBERON:0000077,4.88e-11,35;UBERON:0002370,3.14e-10,23;UBERON:0000974,3.14e-10,23;UBERON:0004807,3.14e-10,23;UBERON:0005058,3.14e-10,23;UBERON:0003351,3.14e-10,23;UBERON:0009113,3.14e-10,23;UBERON:0003295,3.14e-10,23;UBERON:0009722,3.14e-10,23;UBERON:0005562,3.14e-10,23;UBERON:0007690,3.14e-10,23;UBERON:0006562,2.23e-09,24;UBERON:0003408,2.23e-09,24;UBERON:0001557,2.23e-09,24;UBERON:0001042,2.23e-09,24;UBERON:0008814,2.23e-09,24;UBERON:0009145,2.23e-09,24;UBERON:0002384,2.43e-09,46;UBERON:0003081,1.81e-08,87;UBERON:0000490,4.70e-08,66;UBERON:0000072,6.78e-08,27;UBERON:0004119,2.91e-07,118;UBERON:0000925,2.91e-07,118;UBERON:0006595,2.91e-07,118;UBERON:0001007,6.58e-07,116;UBERON:0001555,6.58e-07,116;UBERON:0007026,6.58e-07,116;UBERON:0004923,7.11e-07,24 | |||
|phase1_expression=0.640595388419176,2.79180326111489,6.82498859084304,2.72217790176147,2.50447864973174,2.35030980676646,4.20502753071946,12.2667157269497,9.29205566201001,5.61754863172784,4.62288514208863,2.15384829287408,13.5248576645653,10.7527094975367,2.6648780945253,2.63217847606774,2.09868563438444,6.94016763788123,9.46089591879598,9.76096199135469,1.02051948181284,2.97872853602656,1.56719873483361,1.59992422793407,3.67054849707472,3.44539178469012,0.430761996159075,2.37018355954478,1.71021077510736,2.01624103807945,1.99557459589774,0.635030673459631,1.84519436275371,15.8481681015439,1.73310971850765,0.664938581433969,1.02084678131185,5.4409111995798,4.6880120671428,5.23523743973798,4.1176204162171,5.46436387966757,8.25367600152961,1.25896817975577,1.4192770370732,1.46837401729345,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.699932108126813,0,4.53013036355888,10.8804321301702,13.779845764841,2.31533492432352,2.86533439938757,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,1.69422266034566,0,1.7997994345628,0.988866362566974,2.8419204597844,0.299600110518405,0.384218305321555,0.311068836925433,0.270011876663381,0.210324961351382,0.571301968807607,0.220868540951614,0.61245399607477,0.191690942036473,0.919218786610021,0,0.766124028511126,0.46081959976873,0.131886287730194,0.274462930807229,1.04182674111352,0.558365998002762,0,0.61119299110724,0.294628585473668,0.427115042397309,0.372798891650601,1.4387976733305,1.5870027622425,5.2175607966302,0.860423876981386,4.0798280022465,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,1.53387290320252,0.779358013808606,1.41335829804136,0.422530259330042,0,0,0,1.29894624606728,0.506719730950197,0.505524445014783,1.1418387971906,9.32176381129818,1.1875371125186,1.04091196059682,1.21786191324856,0.230615497256059,1.05505848386836,1.05829836422134,0.753999547978053,3.70792451601561,0.289198713839823,2.65383165584962,1.13236794963186,1.32504911076236,0.969750506270444,5.59175283654366,0.292780797011547,0.209446706813455,3.57639877292028,2.03685711660064,3.59941638596045,1.90605340609597,1.19832511523858,0,0.376963056338593,0.173824320192276,1.53429274398198,0.41557608911912,0.486723789203273,1.01839363850316,1.99051152976149,0,0.841767423545896,0.910843100738926,0.459804208866946,0.720248519221397,0.452114453507145,0.816437989815934,0.640568601424249,0.468508622798644,0.258703370739016,1.07783996466421,0.945530400839096,0.703804496655795,1.53437012699302,0.278047249225598,0.696504333044333,0.411564272815887,0.59710280045548,3.51106593656617,5.1469581422943,2.27330799516474,0.621377317606506,0.469052119962192,0.540186184383045,0.946978942340841,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.934122738937356,0.658239399653922,0.820837320395476,1.21603214318784,1.16959989940266,1.75640092232841,0.671032093801859,0.630869845692382,0.617427674275707,1.65209391491899,2.64450566663544,0.639864751605702,0.696710015581316,1.15980715189884,2.21851877085677,3.11329261382818,2.66315876557583,0.474529061544512,1.97638745668813,2.01068167040216,1.59165177632921,1.55971269695296,0.898819408654221,1.72910439899755,2.19055400579804,0.379335801906163,0.799739588268102,0,0.814605311381257,0.775809948670503,1.33258057791605,0.948548056863859,1.91893192373483,0.470996183524124,1.23397163921801,2.37162101669719,0.500535317148282,1.37591296579242,1.79889689907883,0.811440485554012,0.72353147925725,1.2731292589071,0.863088412352432,1.78348749452539,0,4.31304619582064,1.11642284300551,0.936113019343682,0.757736633841335,0.179397413521912,0.964887042726734,0.923765950833023,0.568474235311454,0.814824882210129,0.848725428875941,0.938760993154008,1.34005005953453,0.952174563544055,1.17080188714679,1.26108115284953,1.32878813789265,0.797273843287435,1.47476983244164,2.24490476425664,1.73578870297814,10.5553898757491,4.89515115436839,2.45882136509518,4.41498794087572,0.963303539926752,0.35163505977661,1.63934945376675,0.757412781613119,0.631016438832513,0.780877488593277,0.430846795465598,0.477937595905104,1.78238939265915,1.13230612315533,2.02405350837447,0.876767573733936,1.58115111178609,0.321321316421807,0.567760340833074,0.712262414669021,1.14020871547503,1.64970122972535,0,0.971122544619926,0.302323556964751,0.377210159511796,1.47650946440386,0.922305443831782,2.32585463851399,1.09060118843252,0.712994756769443,1.58018378967908,1.05418608574999,2.06271086496374,0.340439605753788,0.720244376125241,0.905510786479282,0.214337035031592,0.354680467284547,1.42695054081656,0.987294123612726,0.913394847343798,2.58138878870081,1.27099242518292,0.661585194164886,1.15420377059036,0.968786560175433,0.784068024066026,1.07435109602823,0.328281799490123,2.62332752966866,0.927126510052548,1.87957968877638,2.27025554759545,1.11116716421827,1.88368457004691,2.32380187125743,2.97411625168479,1.69978429993855,2.09927178485487,0.967399816630967,0.954670618015114,0.790839983952838,1.01659733563424,0.540026704109006,0.209088296014469,0.436725127492355,0.674321731924103,0.743881101528023,1.04702376793612,1.16653475962614,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.844780627453891,1.64300134104056,0.911430693907651,1.46803082195995,1.93267296660805,0.864090018773596,15.1685337901526,1.01362607645082,2.46506297195585,3.76770386635606,6.80301443536429,13.510332125126,13.3416948967165,14.9166422446323,19.5874912899406,15.622395364275,21.6776298044207,20.076323432389,16.067377553935,19.9859502730483,0.453460767230423,1.55390167361845,3.6782681209885,0.671538465456314,0.386379188064381,0.750729901804728,1.46521299413812,1.50057865355346,1.50471631210609,0,0.920650473014354,0,1.3748254587495,0.685082519770642,0,1.35004500046361,0,0.906284817968409,0.51776031175182,0.415149390336707,0.399024873401031,0.341467211508268,1.70174701947806,0.209613162627982,0.551530525350042,2.22246727801615,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,1.13175804831646,0.749132059759059,0.960377286073039,1.20614484806788,1.42888107384922,1.85414921511769,1.54327376370964,0,1.61918812147837,1.02860775715625,0.532427418478012,1.43061713968393,1.0174249164263,0.470546902076653,1.18460451048347,0.914639864363863,0.789209134313529,0.679020569229309,2.80571135828869,0.949080144993393,0.985044823755635,0,1.08455788830176,1.15743966588685,1.74867404556562,0.935726433781634,1.07435527024149,1.53030665655075,0.441182838239031,1.15933917810211 | |phase1_expression=0.640595388419176,2.79180326111489,6.82498859084304,2.72217790176147,2.50447864973174,2.35030980676646,4.20502753071946,12.2667157269497,9.29205566201001,5.61754863172784,4.62288514208863,2.15384829287408,13.5248576645653,10.7527094975367,2.6648780945253,2.63217847606774,2.09868563438444,6.94016763788123,9.46089591879598,9.76096199135469,1.02051948181284,2.97872853602656,1.56719873483361,1.59992422793407,3.67054849707472,3.44539178469012,0.430761996159075,2.37018355954478,1.71021077510736,2.01624103807945,1.99557459589774,0.635030673459631,1.84519436275371,15.8481681015439,1.73310971850765,0.664938581433969,1.02084678131185,5.4409111995798,4.6880120671428,5.23523743973798,4.1176204162171,5.46436387966757,8.25367600152961,1.25896817975577,1.4192770370732,1.46837401729345,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.699932108126813,0,4.53013036355888,10.8804321301702,13.779845764841,2.31533492432352,2.86533439938757,1.03134418455488,0.404632921719196,0.528990979272033,1.26766280701236,1.69422266034566,0,1.7997994345628,0.988866362566974,2.8419204597844,0.299600110518405,0.384218305321555,0.311068836925433,0.270011876663381,0.210324961351382,0.571301968807607,0.220868540951614,0.61245399607477,0.191690942036473,0.919218786610021,0,0.766124028511126,0.46081959976873,0.131886287730194,0.274462930807229,1.04182674111352,0.558365998002762,0,0.61119299110724,0.294628585473668,0.427115042397309,0.372798891650601,1.4387976733305,1.5870027622425,5.2175607966302,0.860423876981386,4.0798280022465,0.539703191637817,0.649776417447669,0.448026887097336,0.702222100658759,1.53387290320252,0.779358013808606,1.41335829804136,0.422530259330042,0,0,0,1.29894624606728,0.506719730950197,0.505524445014783,1.1418387971906,9.32176381129818,1.1875371125186,1.04091196059682,1.21786191324856,0.230615497256059,1.05505848386836,1.05829836422134,0.753999547978053,3.70792451601561,0.289198713839823,2.65383165584962,1.13236794963186,1.32504911076236,0.969750506270444,5.59175283654366,0.292780797011547,0.209446706813455,3.57639877292028,2.03685711660064,3.59941638596045,1.90605340609597,1.19832511523858,0,0.376963056338593,0.173824320192276,1.53429274398198,0.41557608911912,0.486723789203273,1.01839363850316,1.99051152976149,0,0.841767423545896,0.910843100738926,0.459804208866946,0.720248519221397,0.452114453507145,0.816437989815934,0.640568601424249,0.468508622798644,0.258703370739016,1.07783996466421,0.945530400839096,0.703804496655795,1.53437012699302,0.278047249225598,0.696504333044333,0.411564272815887,0.59710280045548,3.51106593656617,5.1469581422943,2.27330799516474,0.621377317606506,0.469052119962192,0.540186184383045,0.946978942340841,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.934122738937356,0.658239399653922,0.820837320395476,1.21603214318784,1.16959989940266,1.75640092232841,0.671032093801859,0.630869845692382,0.617427674275707,1.65209391491899,2.64450566663544,0.639864751605702,0.696710015581316,1.15980715189884,2.21851877085677,3.11329261382818,2.66315876557583,0.474529061544512,1.97638745668813,2.01068167040216,1.59165177632921,1.55971269695296,0.898819408654221,1.72910439899755,2.19055400579804,0.379335801906163,0.799739588268102,0,0.814605311381257,0.775809948670503,1.33258057791605,0.948548056863859,1.91893192373483,0.470996183524124,1.23397163921801,2.37162101669719,0.500535317148282,1.37591296579242,1.79889689907883,0.811440485554012,0.72353147925725,1.2731292589071,0.863088412352432,1.78348749452539,0,4.31304619582064,1.11642284300551,0.936113019343682,0.757736633841335,0.179397413521912,0.964887042726734,0.923765950833023,0.568474235311454,0.814824882210129,0.848725428875941,0.938760993154008,1.34005005953453,0.952174563544055,1.17080188714679,1.26108115284953,1.32878813789265,0.797273843287435,1.47476983244164,2.24490476425664,1.73578870297814,10.5553898757491,4.89515115436839,2.45882136509518,4.41498794087572,0.963303539926752,0.35163505977661,1.63934945376675,0.757412781613119,0.631016438832513,0.780877488593277,0.430846795465598,0.477937595905104,1.78238939265915,1.13230612315533,2.02405350837447,0.876767573733936,1.58115111178609,0.321321316421807,0.567760340833074,0.712262414669021,1.14020871547503,1.64970122972535,0,0.971122544619926,0.302323556964751,0.377210159511796,1.47650946440386,0.922305443831782,2.32585463851399,1.09060118843252,0.712994756769443,1.58018378967908,1.05418608574999,2.06271086496374,0.340439605753788,0.720244376125241,0.905510786479282,0.214337035031592,0.354680467284547,1.42695054081656,0.987294123612726,0.913394847343798,2.58138878870081,1.27099242518292,0.661585194164886,1.15420377059036,0.968786560175433,0.784068024066026,1.07435109602823,0.328281799490123,2.62332752966866,0.927126510052548,1.87957968877638,2.27025554759545,1.11116716421827,1.88368457004691,2.32380187125743,2.97411625168479,1.69978429993855,2.09927178485487,0.967399816630967,0.954670618015114,0.790839983952838,1.01659733563424,0.540026704109006,0.209088296014469,0.436725127492355,0.674321731924103,0.743881101528023,1.04702376793612,1.16653475962614,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.844780627453891,1.64300134104056,0.911430693907651,1.46803082195995,1.93267296660805,0.864090018773596,15.1685337901526,1.01362607645082,2.46506297195585,3.76770386635606,6.80301443536429,13.510332125126,13.3416948967165,14.9166422446323,19.5874912899406,15.622395364275,21.6776298044207,20.076323432389,16.067377553935,19.9859502730483,0.453460767230423,1.55390167361845,3.6782681209885,0.671538465456314,0.386379188064381,0.750729901804728,1.46521299413812,1.50057865355346,1.50471631210609,0,0.920650473014354,0,1.3748254587495,0.685082519770642,0,1.35004500046361,0,0.906284817968409,0.51776031175182,0.415149390336707,0.399024873401031,0.341467211508268,1.70174701947806,0.209613162627982,0.551530525350042,2.22246727801615,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,1.13175804831646,0.749132059759059,0.960377286073039,1.20614484806788,1.42888107384922,1.85414921511769,1.54327376370964,0,1.61918812147837,1.02860775715625,0.532427418478012,1.43061713968393,1.0174249164263,0.470546902076653,1.18460451048347,0.914639864363863,0.789209134313529,0.679020569229309,2.80571135828869,0.949080144993393,0.985044823755635,0,1.08455788830176,1.15743966588685,1.74867404556562,0.935726433781634,1.07435527024149,1.53030665655075,0.441182838239031,1.15933917810211 | ||
|short_description=p2@Ccdc93 | |short_description=p2@Ccdc93 | ||
}} | }} |
Latest revision as of 06:39, 26 September 2015
Short description: | p2@Ccdc93 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccdc93_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 18bp_to_ENSMUST00000112621_5end |
EntrezGene: | Ccdc93 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.14e-12 | 32 |
hematopoietic oligopotent progenitor cell | 8.14e-12 | 32 |
hematopoietic stem cell | 8.14e-12 | 32 |
hematopoietic multipotent progenitor cell | 8.14e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 3.19e-10 | 25 |
connective tissue cell | 2.43e-09 | 46 |
mesenchymal cell | 2.43e-09 | 46 |
lymphoid lineage restricted progenitor cell | 5.66e-08 | 12 |
T cell | 1.98e-07 | 11 |
pro-T cell | 1.98e-07 | 11 |
mature alpha-beta T cell | 4.99e-07 | 9 |
alpha-beta T cell | 4.99e-07 | 9 |
immature T cell | 4.99e-07 | 9 |
mature T cell | 4.99e-07 | 9 |
immature alpha-beta T cell | 4.99e-07 | 9 |
lymphocyte | 6.45e-07 | 13 |
common lymphoid progenitor | 6.45e-07 | 13 |
motile cell | 6.51e-07 | 54 |