FFCP PHASE1:Mm9::chr3:126300020..126300031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108058 | |EntrezGene=108058 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PYZ8 | |UniProt=E9PYZ8 | ||
|association_with_transcript=67bp_to_ENSMUST00000131869,uc008rgp.1_5end | |association_with_transcript=67bp_to_ENSMUST00000131869,uc008rgp.1_5end | ||
|cluster_id=chr3:126300020..126300031,+ | |||
|description=CAGE_peak_4_at_Camk2d_5end | |description=CAGE_peak_4_at_Camk2d_5end | ||
|id=chr3:126300020..126300031,+ | |id=chr3:126300020..126300031,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.90e-10!75;UBERON:0001016!3.90e-10!75;UBERON:0004121!4.60e-10!102;UBERON:0000924!4.60e-10!102;UBERON:0006601!4.60e-10!102;UBERON:0001017!3.56e-09!73;UBERON:0005743!3.56e-09!73;UBERON:0002346!2.38e-08!71;UBERON:0003075!2.38e-08!71;UBERON:0007284!2.38e-08!71;UBERON:0004535!1.48e-07!23;UBERON:0001009!1.48e-07!23;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12;UBERON:0001049!2.30e-07!52;UBERON:0005068!2.30e-07!52;UBERON:0006241!2.30e-07!52;UBERON:0007135!2.30e-07!52 | |ontology_enrichment_uberon=UBERON:0000073!3.90e-10!75;UBERON:0001016!3.90e-10!75;UBERON:0004121!4.60e-10!102;UBERON:0000924!4.60e-10!102;UBERON:0006601!4.60e-10!102;UBERON:0001017!3.56e-09!73;UBERON:0005743!3.56e-09!73;UBERON:0002346!2.38e-08!71;UBERON:0003075!2.38e-08!71;UBERON:0007284!2.38e-08!71;UBERON:0004535!1.48e-07!23;UBERON:0001009!1.48e-07!23;UBERON:0003076!2.13e-07!12;UBERON:0003057!2.13e-07!12;UBERON:0001049!2.30e-07!52;UBERON:0005068!2.30e-07!52;UBERON:0006241!2.30e-07!52;UBERON:0007135!2.30e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.71e-15,92;UBERON:0001016,8.37e-11,75;UBERON:0004121,3.57e-10,95;UBERON:0000924,3.57e-10,95;UBERON:0006601,3.57e-10,95;UBERON:0001017,1.12e-09,73;UBERON:0004535,2.44e-09,23;UBERON:0001009,2.44e-09,23;UBERON:0002346,6.79e-09,64;UBERON:0003075,6.79e-09,64;UBERON:0007284,6.79e-09,64;UBERON:0007100,2.08e-08,18;UBERON:0000948,2.08e-08,18;UBERON:0005498,2.08e-08,18;UBERON:0004140,2.08e-08,18;UBERON:0009881,2.08e-08,18;UBERON:0004141,2.08e-08,18;UBERON:0003084,2.08e-08,18;UBERON:0007005,2.08e-08,18;UBERON:0004139,2.08e-08,18;UBERON:0004291,2.08e-08,18;UBERON:0003076,3.17e-08,12;UBERON:0003057,3.17e-08,12;UBERON:0000073,8.91e-08,54;UBERON:0001049,1.23e-07,52;UBERON:0005068,1.23e-07,52;UBERON:0006241,1.23e-07,52;UBERON:0007135,1.23e-07,52;UBERON:0010371,6.55e-07,73 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,1.81478526784098,3.50627010962443,1.17515490338323,1.86890112476421,1.54947988129892,4.78681655315667,4.21316147379588,3.08192342805909,1.59544317990673,0.513602189793617,0.874204024189974,0.666219523631325,0.202475267389826,0,2.20823515750766,2.4680598049033,2.12194825899015,1.10556277196391,0.992909512008853,0.261199789138935,0.799962113967033,0.45881856213434,1.72269589234506,1.29228598847722,0.861884930743556,1.71021077510736,0.756090389279792,0.886922042621219,0,0,0,0.577703239502549,0.831173226792462,2.04169356262369,0.418531630736908,1.5626706890476,0,0,0,0,3.65100772129174,2.63580021170738,2.0190142737785,2.34717403304412,0.872100625521786,5.93152693383074,5.24960727500565,0.419959264876088,1.43752564364972,2.68452169692378,0.725362142011344,1.00828139742739,2.05807548828758,0,2.06268836910977,0.606949382578793,0.528990979272033,1.26766280701236,1.35537812827653,0,0.449949858640699,0.988866362566974,0,1.49800055259202,1.53687322128622,0,0.270011876663381,0.420649922702764,5.42736870367227,5.74258206474195,0.367472397644862,0.287536413054709,0.919218786610021,0,3.83062014255563,3.99376986466233,0.659431438650969,0.640413505216868,0.52091337055676,6.14202597803038,6.19038871034848,4.12555268997387,7.95497180778903,6.54909731675874,5.59198337475902,6.51245262665383,4.6854367266207,1.44932244350839,0.860423876981386,0,0,0,0.448026887097336,0.983110940922263,0.852151612890289,1.03914401841148,0.70667914902068,0.985903938436763,0,7.64415719119937,14.2213340630666,1.08245520505607,0.506719730950197,0.505524445014783,0.5709193985953,3.36619248741323,1.1875371125186,0.520455980298408,0.304465478312141,1.15307748628029,1.05505848386836,1.29347577849275,1.25666591329675,0.741584903203122,0.578397427679647,0,1.7794353494215,0.883366073841574,1.45462575940567,1.86391761218122,5.27005434620785,3.14170060220183,1.78819938646014,0.958520996047362,0,0.254140454146129,6.5907881338122,2.28750301409313,1.50785222535437,3.12883776346098,3.58001640262463,3.74018480207208,2.27137768294861,0.203678727700633,1.11966273549084,0.505445516867349,3.57751155007006,0.650602214813519,0.229902104433473,0.540186389416048,1.20563854268572,1.02054748726992,1.40925092313335,2.62364828767241,3.62184719034622,0,0.378212160335639,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0.257347907114715,0,2.48550927042602,1.40715635988658,2.16074473753218,2.3674473558521,2.55793501271625,2.31400669331067,3.0229412817553,1.3413670069981,3.50296027101508,2.46839774870221,3.2833492815819,3.32382119138008,2.92399974850665,3.07370161407471,2.68412837520744,1.26173969138476,0.308713837137853,0.991256348951394,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0.80673409849337,0.667134131534611,1.52180500890047,0.949058123089023,1.31759163779209,1.00534083520108,1.59165177632921,0.779856348476481,2.69645822596266,1.72910439899755,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.911765658574141,0.69560190836683,0.590440591918409,0.31399745568275,0.987177311374404,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,1.10851914099963,0.757965647081939,0.651859905768103,0.509235257325564,0.938760993154008,0.837531287209079,0.476087281772027,2.73187107000918,0.945810864637146,1.32878813789265,0.159454768657487,0.655453258862952,0.690739927463582,0.867894351489069,1.50791283939272,1.08781136763742,0,0.827810238914197,4.97706828962155,3.39913891117389,0.983609672260053,2.01976741763498,1.26203287766503,1.17131623288992,1.93881057959519,1.19484398976276,3.56477878531831,1.69845918473299,0.809621403349789,1.16902343164525,2.76701444562566,1.92792789853084,1.13552068166615,0.35613120733451,0.81443479676788,0.824850614862677,0,0,0,0,0.295301892880773,0.307435147943927,0.775284879504663,0,0.712994756769443,0,0,0,0,0.900305470156551,0.646793418913773,0.428674070063185,0.532020700926821,0.713475270408282,0.822745103010605,1.8267896946876,0.938686832254841,0.21183207086382,0.441056796109924,1.15420377059036,1.29171541356724,0.603129249281559,0.358117032009409,0.328281799490123,0.874442509889552,3.70850604021019,0.854354403989263,0,0.555583582109135,0.188368457004691,0.683471138605126,0.228778173206523,1.5298058699447,1.53946597556024,0.829199842826543,1.90934123603023,0.316335993581135,1.01659733563424,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,1.57041565878138,1.57053565190418,0.388844919875379,2.4853572523477,0,0,0.496375471371293,0.388902376688095,0.645799117388655,0.168956125490778,1.05621514781179,0.781226309063701,0.629156066554265,0,0.288030006257865,0,0.405450430580328,0.308132871494482,0.649604114888975,0.537080087002444,1.39076948346885,1.20195449519969,0.886137163047463,0.605798699688886,0.914481679859998,0.403304740547362,0.194915761479505,0.577271049841977,0.350630706544707,1.5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|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,1.81478526784098,3.50627010962443,1.17515490338323,1.86890112476421,1.54947988129892,4.78681655315667,4.21316147379588,3.08192342805909,1.59544317990673,0.513602189793617,0.874204024189974,0.666219523631325,0.202475267389826,0,2.20823515750766,2.4680598049033,2.12194825899015,1.10556277196391,0.992909512008853,0.261199789138935,0.799962113967033,0.45881856213434,1.72269589234506,1.29228598847722,0.861884930743556,1.71021077510736,0.756090389279792,0.886922042621219,0,0,0,0.577703239502549,0.831173226792462,2.04169356262369,0.418531630736908,1.5626706890476,0,0,0,0,3.65100772129174,2.63580021170738,2.0190142737785,2.34717403304412,0.872100625521786,5.93152693383074,5.24960727500565,0.419959264876088,1.43752564364972,2.68452169692378,0.725362142011344,1.00828139742739,2.05807548828758,0,2.06268836910977,0.606949382578793,0.528990979272033,1.26766280701236,1.35537812827653,0,0.449949858640699,0.988866362566974,0,1.49800055259202,1.53687322128622,0,0.270011876663381,0.420649922702764,5.42736870367227,5.74258206474195,0.367472397644862,0.287536413054709,0.919218786610021,0,3.83062014255563,3.99376986466233,0.659431438650969,0.640413505216868,0.52091337055676,6.14202597803038,6.19038871034848,4.12555268997387,7.95497180778903,6.54909731675874,5.59198337475902,6.51245262665383,4.6854367266207,1.44932244350839,0.860423876981386,0,0,0,0.448026887097336,0.983110940922263,0.852151612890289,1.03914401841148,0.70667914902068,0.985903938436763,0,7.64415719119937,14.2213340630666,1.08245520505607,0.506719730950197,0.505524445014783,0.5709193985953,3.36619248741323,1.1875371125186,0.520455980298408,0.304465478312141,1.15307748628029,1.05505848386836,1.29347577849275,1.25666591329675,0.741584903203122,0.578397427679647,0,1.7794353494215,0.883366073841574,1.45462575940567,1.86391761218122,5.27005434620785,3.14170060220183,1.78819938646014,0.958520996047362,0,0.254140454146129,6.5907881338122,2.28750301409313,1.50785222535437,3.12883776346098,3.58001640262463,3.74018480207208,2.27137768294861,0.203678727700633,1.11966273549084,0.505445516867349,3.57751155007006,0.650602214813519,0.229902104433473,0.540186389416048,1.20563854268572,1.02054748726992,1.40925092313335,2.62364828767241,3.62184719034622,0,0.378212160335639,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0.257347907114715,0,2.48550927042602,1.40715635988658,2.16074473753218,2.3674473558521,2.55793501271625,2.31400669331067,3.0229412817553,1.3413670069981,3.50296027101508,2.46839774870221,3.2833492815819,3.32382119138008,2.92399974850665,3.07370161407471,2.68412837520744,1.26173969138476,0.308713837137853,0.991256348951394,0.264450566663544,0.213288250535234,0.232236671860439,0.38660238396628,0.80673409849337,0.667134131534611,1.52180500890047,0.949058123089023,1.31759163779209,1.00534083520108,1.59165177632921,0.779856348476481,2.69645822596266,1.72910439899755,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.911765658574141,0.69560190836683,0.590440591918409,0.31399745568275,0.987177311374404,0.296452627087149,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,1.10851914099963,0.757965647081939,0.651859905768103,0.509235257325564,0.938760993154008,0.837531287209079,0.476087281772027,2.73187107000918,0.945810864637146,1.32878813789265,0.159454768657487,0.655453258862952,0.690739927463582,0.867894351489069,1.50791283939272,1.08781136763742,0,0.827810238914197,4.97706828962155,3.39913891117389,0.983609672260053,2.01976741763498,1.26203287766503,1.17131623288992,1.93881057959519,1.19484398976276,3.56477878531831,1.69845918473299,0.809621403349789,1.16902343164525,2.76701444562566,1.92792789853084,1.13552068166615,0.35613120733451,0.81443479676788,0.824850614862677,0,0,0,0,0.295301892880773,0.307435147943927,0.775284879504663,0,0.712994756769443,0,0,0,0,0.900305470156551,0.646793418913773,0.428674070063185,0.532020700926821,0.713475270408282,0.822745103010605,1.8267896946876,0.938686832254841,0.21183207086382,0.441056796109924,1.15420377059036,1.29171541356724,0.603129249281559,0.358117032009409,0.328281799490123,0.874442509889552,3.70850604021019,0.854354403989263,0,0.555583582109135,0.188368457004691,0.683471138605126,0.228778173206523,1.5298058699447,1.53946597556024,0.829199842826543,1.90934123603023,0.316335993581135,1.01659733563424,0.432021363287205,0.418176592028937,0.218362563746178,0.404593039154462,1.57041565878138,1.57053565190418,0.388844919875379,2.4853572523477,0,0,0.496375471371293,0.388902376688095,0.645799117388655,0.168956125490778,1.05621514781179,0.781226309063701,0.629156066554265,0,0.288030006257865,0,0.405450430580328,0.308132871494482,0.649604114888975,0.537080087002444,1.39076948346885,1.20195449519969,0.886137163047463,0.605798699688886,0.914481679859998,0.403304740547362,0.194915761479505,0.577271049841977,0.350630706544707,1.5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| ||
|short_description=p4@Camk2d | |short_description=p4@Camk2d | ||
}} | }} |
Latest revision as of 13:46, 1 October 2015
Short description: | p4@Camk2d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Camk2d_5end |
Coexpression cluster: | NA |
Association with transcript: | 67bp_to_ENSMUST00000131869, uc008rgp.1_5end |
EntrezGene: | Camk2d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.71e-15 | 92 |
nervous system | 8.37e-11 | 75 |
ectoderm-derived structure | 3.57e-10 | 95 |
ectoderm | 3.57e-10 | 95 |
presumptive ectoderm | 3.57e-10 | 95 |
central nervous system | 1.12e-09 | 73 |
cardiovascular system | 2.44e-09 | 23 |
circulatory system | 2.44e-09 | 23 |
neurectoderm | 6.79e-09 | 64 |
neural plate | 6.79e-09 | 64 |
presumptive neural plate | 6.79e-09 | 64 |
primary circulatory organ | 2.08e-08 | 18 |
heart | 2.08e-08 | 18 |
primitive heart tube | 2.08e-08 | 18 |
primary heart field | 2.08e-08 | 18 |
anterior lateral plate mesoderm | 2.08e-08 | 18 |
heart tube | 2.08e-08 | 18 |
heart primordium | 2.08e-08 | 18 |
cardiac mesoderm | 2.08e-08 | 18 |
cardiogenic plate | 2.08e-08 | 18 |
heart rudiment | 2.08e-08 | 18 |
posterior neural tube | 3.17e-08 | 12 |
chordal neural plate | 3.17e-08 | 12 |
regional part of nervous system | 8.91e-08 | 54 |
neural tube | 1.23e-07 | 52 |
neural rod | 1.23e-07 | 52 |
future spinal cord | 1.23e-07 | 52 |
neural keel | 1.23e-07 | 52 |
ecto-epithelium | 6.55e-07 | 73 |