FFCP PHASE1:Hg19::chr13:56628548..56628553,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:56628548..56628553,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr13:56628548..56628553,- | |description=CAGE_peak_at_chr13:56628548..56628553,- | ||
|id=chr13:56628548..56628553,- | |id=chr13:56628548..56628553,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!5.68e-99!2;UBERON:0002757!5.68e-99!2;UBERON:0010134!5.68e-99!2;UBERON:0002784!5.68e-99!2;UBERON:0005408!5.68e-99!2;UBERON:0001899!5.68e-99!2;UBERON:0003296!3.11e-50!4;UBERON:0010133!3.11e-50!4;UBERON:0002022!6.58e-50!1;UBERON:0001894!2.74e-29!7;UBERON:0006222!2.74e-29!7;UBERON:0001876!7.14e-26!2;UBERON:0002780!1.19e-19!41;UBERON:0001890!1.19e-19!41;UBERON:0006240!1.19e-19!41;UBERON:0003080!3.24e-19!42;UBERON:0001049!1.72e-14!57;UBERON:0005068!1.72e-14!57;UBERON:0006241!1.72e-14!57;UBERON:0007135!1.72e-14!57;UBERON:0002616!4.87e-14!59;UBERON:0003056!1.29e-13!61;UBERON:0000955!5.31e-12!69;UBERON:0006238!5.31e-12!69;UBERON:0000349!3.26e-11!5;UBERON:0001950!1.86e-10!20;UBERON:0001017!2.82e-10!82;UBERON:0003075!5.98e-10!86;UBERON:0007284!5.98e-10!86;UBERON:0005743!7.60e-10!86;UBERON:0002619!1.22e-09!22;UBERON:0002346!1.51e-09!90;UBERON:0000073!5.24e-09!94;UBERON:0001016!5.24e-09!94;UBERON:0000956!1.20e-08!25;UBERON:0000203!1.20e-08!25;UBERON:0007023!1.02e-07!115;UBERON:0001871!1.69e-07!7;UBERON:0000033!3.69e-07!123;UBERON:0001869!5.04e-07!32;UBERON:0000153!7.27e-07!129;UBERON:0007811!7.27e-07!129;UBERON:0002791!7.59e-07!33;UBERON:0002420!8.37e-07!9;UBERON:0007245!8.37e-07!9;UBERON:0010009!8.37e-07!9;UBERON:0010011!8.37e-07!9;UBERON:0000454!8.37e-07!9;UBERON:0002368!9.98e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.29e-195;2!UBERON:0002757;3.29e-195;2!UBERON:0010134;3.29e-195;2!UBERON:0005408;3.29e-195;2!UBERON:0001899;3.29e-195;2!UBERON:0003296;1.55e-98;4!UBERON:0010133;1.55e-98;4!UBERON:0002784;1.55e-98;4!UBERON:0001894;4.76e-57;7!UBERON:0000949;1.70e-11;43!UBERON:0002368;1.71e-11;33!UBERON:0002780;1.47e-07;41!UBERON:0001890;1.47e-07;41!UBERON:0002530;7.93e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.29e-195,2;UBERON:0002757,3.29e-195,2;UBERON:0010134,3.29e-195,2;UBERON:0005408,3.29e-195,2;UBERON:0001899,3.29e-195,2;UBERON:0003296,1.55e-98,4;UBERON:0010133,1.55e-98,4;UBERON:0002784,1.55e-98,4;UBERON:0001894,4.76e-57,7;UBERON:0006222,4.76e-57,7;UBERON:0002368,1.42e-12,35;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000949,4.55e-10,45;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0002530,5.66e-08,59;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p@chr13:56628548..56628553,- | |short_description=p@chr13:56628548..56628553,- | ||
}} | }} |
Latest revision as of 16:52, 24 July 2015
Short description: | p@chr13:56628548..56628553, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:56628548..56628553, - |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 3.29e-195 | 2 |
regional part of epithalamus | 3.29e-195 | 2 |
secretory circumventricular organ | 3.29e-195 | 2 |
circumventricular organ | 3.29e-195 | 2 |
epithalamus | 3.29e-195 | 2 |
gland of diencephalon | 1.55e-98 | 4 |
neuroendocrine gland | 1.55e-98 | 4 |
regional part of diencephalon | 1.55e-98 | 4 |
diencephalon | 4.76e-57 | 7 |
future diencephalon | 4.76e-57 | 7 |
endocrine gland | 1.42e-12 | 35 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
endocrine system | 4.55e-10 | 45 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
gland | 5.66e-08 | 59 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |