FFCP PHASE1:Hg19::chr10:135088743..135088755,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135088743..135088755,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:135088743..135088755,+ | |description=CAGE_peak_at_chr10:135088743..135088755,+ | ||
|id=chr10:135088743..135088755,+ | |id=chr10:135088743..135088755,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.69e-71!140;CL:0002057!1.25e-64!42;CL:0000860!1.81e-59!45;CL:0000037!1.95e-55!172;CL:0000566!1.95e-55!172;CL:0000766!2.36e-55!76;CL:0002032!1.36e-51!165;CL:0000837!1.36e-51!165;CL:0000988!3.26e-51!182;CL:0002031!1.00e-50!124;CL:0002087!3.89e-49!119;CL:0000557!1.30e-43!71;CL:0002009!3.76e-41!65;CL:0000763!6.51e-41!112;CL:0000049!6.51e-41!112;CL:0000839!8.74e-40!70;CL:0002194!4.42e-38!63;CL:0000576!4.42e-38!63;CL:0000040!4.42e-38!63;CL:0000559!4.42e-38!63;CL:0000094!6.68e-18!8;CL:0002393!6.25e-17!9;CL:0002397!6.25e-17!9;CL:0000134!1.08e-15!358;CL:0002320!5.30e-15!365;CL:0000219!1.38e-12!390;CL:0000081!1.70e-12!11;CL:0000838!4.37e-10!52;CL:0000034!5.26e-10!444;CL:0000542!8.50e-10!53;CL:0000051!8.50e-10!53;CL:0000048!9.53e-10!430;CL:0000723!2.38e-09!436;CL:0000791!1.73e-08!18;CL:0000789!1.73e-08!18;CL:0002420!1.73e-08!18;CL:0002419!1.73e-08!18;CL:0000790!1.73e-08!18;CL:0000767!1.00e-07!3;CL:0000775!1.16e-07!3;CL:0000623!9.46e-07!3;CL:0000825!9.46e-07!3 | |ontology_enrichment_celltype=CL:0000738!5.69e-71!140;CL:0002057!1.25e-64!42;CL:0000860!1.81e-59!45;CL:0000037!1.95e-55!172;CL:0000566!1.95e-55!172;CL:0000766!2.36e-55!76;CL:0002032!1.36e-51!165;CL:0000837!1.36e-51!165;CL:0000988!3.26e-51!182;CL:0002031!1.00e-50!124;CL:0002087!3.89e-49!119;CL:0000557!1.30e-43!71;CL:0002009!3.76e-41!65;CL:0000763!6.51e-41!112;CL:0000049!6.51e-41!112;CL:0000839!8.74e-40!70;CL:0002194!4.42e-38!63;CL:0000576!4.42e-38!63;CL:0000040!4.42e-38!63;CL:0000559!4.42e-38!63;CL:0000094!6.68e-18!8;CL:0002393!6.25e-17!9;CL:0002397!6.25e-17!9;CL:0000134!1.08e-15!358;CL:0002320!5.30e-15!365;CL:0000219!1.38e-12!390;CL:0000081!1.70e-12!11;CL:0000838!4.37e-10!52;CL:0000034!5.26e-10!444;CL:0000542!8.50e-10!53;CL:0000051!8.50e-10!53;CL:0000048!9.53e-10!430;CL:0000723!2.38e-09!436;CL:0000791!1.73e-08!18;CL:0000789!1.73e-08!18;CL:0002420!1.73e-08!18;CL:0002419!1.73e-08!18;CL:0000790!1.73e-08!18;CL:0000767!1.00e-07!3;CL:0000775!1.16e-07!3;CL:0000623!9.46e-07!3;CL:0000825!9.46e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.72e-42;33!CL:0002057;6.72e-42;33!CL:0000094;3.45e-32;8!CL:0000473;1.32e-30;39!CL:0000234;1.32e-30;39!CL:0000766;2.13e-29;69!CL:0000576;4.07e-28;48!CL:0000081;5.09e-23;11!CL:0000767;3.72e-13;3!CL:0000775;6.51e-13;3!CL:0000763;1.61e-12;100!CL:0002087;1.58e-11;104!CL:0002393;5.46e-11;6!CL:0002397;5.46e-11;6!CL:0000738;2.91e-10;136!CL:0000771;1.29e-09;2!CL:0000097;1.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.50e-61,72;CL:0000860,4.55e-51,42;CL:0002057,4.55e-51,42;CL:0000738,9.44e-48,136;CL:0000473,6.93e-44,48;CL:0000234,6.93e-44,48;CL:0000763,1.04e-40,108;CL:0000049,1.04e-40,108;CL:0000557,1.31e-40,67;CL:0000839,3.38e-38,66;CL:0000037,7.56e-37,168;CL:0002009,1.59e-35,61;CL:0002032,6.02e-35,161;CL:0000837,6.02e-35,161;CL:0000988,1.74e-34,177;CL:0002194,7.78e-34,59;CL:0000576,7.78e-34,59;CL:0000040,7.78e-34,59;CL:0000559,7.78e-34,59;CL:0000094,3.09e-32,8;CL:0002031,2.26e-30,120;CL:0002087,1.13e-27,115;CL:0000081,4.70e-23,11;CL:0000767,4.05e-13,3;CL:0000775,5.35e-13,3;CL:0000134,2.38e-12,354;CL:0002320,6.42e-12,361;CL:0000219,2.10e-10,386;CL:0000771,1.30e-09,2;CL:0000034,2.03e-09,441;CL:0000048,1.48e-08,427;CL:0000723,2.67e-08,433;CL:0000097,1.20e-07,5;CL:0002028,1.20e-07,5;CL:0002393,2.18e-07,9;CL:0002397,2.18e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.58e-35;42!CL:0000049;1.71e-09;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.35e-43!102;UBERON:0003061!1.35e-43!102;UBERON:0002193!2.75e-38!112;UBERON:0002371!3.16e-37!80;UBERON:0001474!1.03e-33!86;UBERON:0004765!8.91e-27!101;UBERON:0001434!8.91e-27!101;UBERON:0002405!4.06e-23!115;UBERON:0002384!4.60e-14!375;UBERON:0003081!2.82e-13!216;UBERON:0002204!2.30e-11!167;UBERON:0000178!2.08e-09!15;UBERON:0000179!2.08e-09!15;UBERON:0000463!2.08e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.64e-11;15!UBERON:0000179;3.64e-11;15!UBERON:0000463;3.64e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-41,98;UBERON:0003061,1.04e-41,98;UBERON:0002193,4.29e-37,108;UBERON:0002371,5.20e-35,76;UBERON:0001474,5.92e-32,82;UBERON:0004765,1.65e-28,90;UBERON:0002405,2.28e-27,93;UBERON:0001434,5.67e-25,100;UBERON:0003081,7.45e-16,203;UBERON:0002204,3.25e-12,167;UBERON:0002384,2.48e-11,371;UBERON:0000178,3.02e-11,15;UBERON:0000179,3.02e-11,15;UBERON:0000463,3.02e-11,15;UBERON:0000926,2.39e-07,315;UBERON:0004120,2.39e-07,315;UBERON:0006603,2.39e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,14.5544782434094,4.22212337906934,4.33485145285013,0,0,0,0,0,0,8.30993112797816,4.8130667392834,5.4252717678963,0,0,0,1.01778767145695,0.377875943688809,0.970336244751265,0.697287110717054,1.23350366406548,3.09706370895104,1.1507695692886,1.2808035326455,1.18241114944293,6.55016793399575,3.87290810150296,6.77132432971709,2.07066573496865,0.818718450173537,0.674170453335254,3.67300670845083,2.24650318953266,3.83602275479425,0,0.199463657621632,1.70489900213078,1.45104619314292,0,0,1.00499466102697,2.08593167368081,0.65156653411535,0.605399502633369,1.47311054395026,0.949387162322653,0.633765858935825,1.70083439972035,0.838634582033504,2.02191536063691,2.4028302854641,2.73233497385036,0.570025487482497,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,2.64342657158052,4.48406850385229,0,0.393419540227666,1.17903228824749,1.43921049299656,0.334372990781356,0.32592226663359,0,0,0,0,0,0,0.512365278902701,0.650296737799391,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0.236777252044017,0.821127996921047,0.604820229674197,1.87208137048455,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6273001846552,27.1446184903828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,5.80518723514162,1.58531948758658,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.50939302401662,1.15508732651774,0,0,0,0,0,5.99205619157746,2.99161459204025,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,1.52234282769651,1.52927441428475,0,0,1.23408681925858,1.29694662238543,0.540031437238115,3.17250070517708,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.899895566206002,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,14.5544782434094,4.22212337906934,4.33485145285013,0,0,0,0,0,0,8.30993112797816,4.8130667392834,5.4252717678963,0,0,0,1.01778767145695,0.377875943688809,0.970336244751265,0.697287110717054,1.23350366406548,3.09706370895104,1.1507695692886,1.2808035326455,1.18241114944293,6.55016793399575,3.87290810150296,6.77132432971709,2.07066573496865,0.818718450173537,0.674170453335254,3.67300670845083,2.24650318953266,3.83602275479425,0,0.199463657621632,1.70489900213078,1.45104619314292,0,0,1.00499466102697,2.08593167368081,0.65156653411535,0.605399502633369,1.47311054395026,0.949387162322653,0.633765858935825,1.70083439972035,0.838634582033504,2.02191536063691,2.4028302854641,2.73233497385036,0.570025487482497,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,1.17447437874188,0.764546456250458,2.64342657158052,4.48406850385229,0,0.393419540227666,1.17903228824749,1.43921049299656,0.334372990781356,0.32592226663359,0,0,0,0,0,0,0.512365278902701,0.650296737799391,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.301150238155546,0,0,0.236777252044017,0.821127996921047,0.604820229674197,1.87208137048455,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6273001846552,27.1446184903828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,5.80518723514162,1.58531948758658,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.50939302401662,1.15508732651774,0,0,0,0,0,5.99205619157746,2.99161459204025,5.8018171881045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,1.52234282769651,1.52927441428475,0,0,1.23408681925858,1.29694662238543,0.540031437238115,3.17250070517708,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0.899895566206002,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:135088743..135088755,+ | |short_description=p@chr10:135088743..135088755,+ | ||
}} | }} |
Latest revision as of 11:51, 23 July 2015
Short description: | p@chr10:135088743..135088755, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135088743..135088755, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-41 | 98 |
blood island | 1.04e-41 | 98 |
hemolymphoid system | 4.29e-37 | 108 |
bone marrow | 5.20e-35 | 76 |
bone element | 5.92e-32 | 82 |
skeletal element | 1.65e-28 | 90 |
immune system | 2.28e-27 | 93 |
skeletal system | 5.67e-25 | 100 |
lateral plate mesoderm | 7.45e-16 | 203 |
musculoskeletal system | 3.25e-12 | 167 |
connective tissue | 2.48e-11 | 371 |
blood | 3.02e-11 | 15 |
haemolymphatic fluid | 3.02e-11 | 15 |
organism substance | 3.02e-11 | 15 |
mesoderm | 2.39e-07 | 315 |
mesoderm-derived structure | 2.39e-07 | 315 |
presumptive mesoderm | 2.39e-07 | 315 |