FFCP PHASE1:Hg19::chr10:14050273..14050290,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55691 | |EntrezGene=55691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |HGNC=25491 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T378 | |UniProt=Q5T378 | ||
|association_with_transcript=-113bp_to_uc001imu.1_5end | |association_with_transcript=-113bp_to_uc001imu.1_5end | ||
|cluster_id=chr10:14050273..14050290,- | |||
|description=CAGE_peak_9_at_FRMD4A_5end | |description=CAGE_peak_9_at_FRMD4A_5end | ||
|id=chr10:14050273..14050290,- | |id=chr10:14050273..14050290,- | ||
|ontology_enrichment_celltype=CL:0000187!2.16e-16!54;CL:0000680!1.54e-15!57;CL:0000056!1.54e-15!57;CL:0000355!1.54e-15!57;CL:0000183!2.37e-15!59;CL:0000192!1.23e-14!42;CL:0000514!1.23e-14!42;CL:0000055!3.34e-14!180;CL:0000393!2.61e-13!60;CL:0000211!2.61e-13!60;CL:0000359!5.61e-13!32;CL:0000222!3.11e-10!119 | |ontology_enrichment_celltype=CL:0000187!2.16e-16!54;CL:0000680!1.54e-15!57;CL:0000056!1.54e-15!57;CL:0000355!1.54e-15!57;CL:0000183!2.37e-15!59;CL:0000192!1.23e-14!42;CL:0000514!1.23e-14!42;CL:0000055!3.34e-14!180;CL:0000393!2.61e-13!60;CL:0000211!2.61e-13!60;CL:0000359!5.61e-13!32;CL:0000222!3.11e-10!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.00e-11;32!CL:0002573;1.04e-09;2!CL:0002592;1.04e-09;3!CL:0002539;5.81e-08;10!CL:0000054;5.10e-07;2!CL:0000137;5.10e-07;2!CL:0000092;5.10e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.13e-11,32;CL:0002573,5.74e-10,2;CL:0002592,7.57e-10,3;CL:0002539,4.20e-08,10;CL:0000187,4.81e-08,55;CL:0000192,5.16e-08,43;CL:0000514,5.16e-08,43;CL:0000680,1.81e-07,58;CL:0000056,1.81e-07,58;CL:0000355,1.81e-07,58;CL:0000054,3.67e-07,2;CL:0000137,3.67e-07,2;CL:0000092,3.67e-07,2;CL:0000393,5.94e-07,61;CL:0000211,5.94e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.55e-09!14 | |ontology_enrichment_disease=DOID:2394!2.55e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.66e-21;14!DOID:120;8.63e-10;27!DOID:193;5.64e-09;29!DOID:201;1.54e-08;6!DOID:0060100;1.54e-08;6!DOID:200;5.10e-07;2!DOID:4305;5.10e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-20,14;DOID:120,1.12e-09,27;DOID:193,7.18e-09,29;DOID:201,1.96e-08,6;DOID:0060100,1.96e-08,6;DOID:200,3.67e-07,2;DOID:4305,3.67e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001134!1.45e-13!61;UBERON:0002036!1.45e-13!61;UBERON:0003082!1.45e-13!61;UBERON:0002385!2.70e-13!63;UBERON:0001015!2.70e-13!63;UBERON:0000383!2.70e-13!63;UBERON:0000914!9.42e-13!83;UBERON:0002329!9.42e-13!83;UBERON:0003077!9.42e-13!83;UBERON:0003059!9.42e-13!83;UBERON:0007282!9.42e-13!83;UBERON:0009618!9.42e-13!83;UBERON:0007285!9.42e-13!83;UBERON:0002049!2.10e-11!79;UBERON:0007798!2.10e-11!79;UBERON:0004290!3.27e-11!70;UBERON:0001637!5.13e-11!42;UBERON:0003509!5.13e-11!42;UBERON:0004572!5.13e-11!42;UBERON:0001981!8.80e-11!60;UBERON:0007500!8.80e-11!60;UBERON:0004537!8.80e-11!60;UBERON:0006965!8.80e-11!60;UBERON:0004573!1.63e-10!33;UBERON:0004571!1.63e-10!33;UBERON:0000486!4.75e-10!82;UBERON:0000055!4.77e-10!69;UBERON:0004872!4.99e-09!84;UBERON:0000477!3.42e-08!286;UBERON:0004535!6.70e-08!110;UBERON:0001009!9.84e-08!113 | |ontology_enrichment_uberon=UBERON:0001134!1.45e-13!61;UBERON:0002036!1.45e-13!61;UBERON:0003082!1.45e-13!61;UBERON:0002385!2.70e-13!63;UBERON:0001015!2.70e-13!63;UBERON:0000383!2.70e-13!63;UBERON:0000914!9.42e-13!83;UBERON:0002329!9.42e-13!83;UBERON:0003077!9.42e-13!83;UBERON:0003059!9.42e-13!83;UBERON:0007282!9.42e-13!83;UBERON:0009618!9.42e-13!83;UBERON:0007285!9.42e-13!83;UBERON:0002049!2.10e-11!79;UBERON:0007798!2.10e-11!79;UBERON:0004290!3.27e-11!70;UBERON:0001637!5.13e-11!42;UBERON:0003509!5.13e-11!42;UBERON:0004572!5.13e-11!42;UBERON:0001981!8.80e-11!60;UBERON:0007500!8.80e-11!60;UBERON:0004537!8.80e-11!60;UBERON:0006965!8.80e-11!60;UBERON:0004573!1.63e-10!33;UBERON:0004571!1.63e-10!33;UBERON:0000486!4.75e-10!82;UBERON:0000055!4.77e-10!69;UBERON:0004872!4.99e-09!84;UBERON:0000477!3.42e-08!286;UBERON:0004535!6.70e-08!110;UBERON:0001009!9.84e-08!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.31e-11;13!UBERON:0002118;3.03e-10;5!UBERON:0003498;1.04e-09;3!UBERON:0005985;1.04e-09;3!UBERON:0001621;1.04e-09;3!UBERON:0004573;1.35e-08;33!UBERON:0004571;1.35e-08;33!UBERON:0002119;2.44e-08;4!UBERON:0004237;5.81e-08;10!UBERON:0004695;5.81e-08;10!UBERON:0002111;5.81e-08;10!UBERON:0004178;5.81e-08;10!UBERON:0001637;7.18e-07;42!UBERON:0003509;7.18e-07;42!UBERON:0004572;7.18e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.50e-11,13;UBERON:0002118,1.49e-10,5;UBERON:0001637,6.39e-10,42;UBERON:0003509,6.39e-10,42;UBERON:0004572,6.39e-10,42;UBERON:0001621,7.57e-10,3;UBERON:0004573,9.76e-10,33;UBERON:0004571,9.76e-10,33;UBERON:0007500,1.16e-08,59;UBERON:0001981,1.16e-08,59;UBERON:0004537,1.16e-08,59;UBERON:0006965,1.16e-08,59;UBERON:0002119,2.57e-08,4;UBERON:0004237,4.20e-08,10;UBERON:0004695,4.20e-08,10;UBERON:0002111,4.20e-08,10;UBERON:0004178,4.20e-08,10;UBERON:0004872,5.93e-08,83;UBERON:0000055,4.55e-07,68;UBERON:0001134,8.59e-07,62;UBERON:0002036,8.59e-07,62;UBERON:0003082,8.59e-07,62;UBERON:0000991,9.97e-07,21;UBERON:0009196,9.97e-07,21;UBERON:0009117,9.97e-07,21;UBERON:0005564,9.97e-07,21 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,2.41077811209591,2.19093027116212,1.46379839637152,0.123121058076788,0,0,0,0,0.125542639594803,1.45185470921107,1.55991119954897,1.25937250101887,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.512365278902701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0.66944122552934,0.402829317109147,0,0,0,0,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,1.49091585508596,0.506522046658319,3.70745706277013,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0.908144565869588,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0.250237039743928,0.277064115484183,0.877955241761676,1.22595118319608,1.20190447125277,0,0.358779271377724,0.213557388818567,0,0.600182192168805,0.103052529238439,0.772921620136887,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0,0.448524337381443,0,0.22001485746285,0.904902010304444,0,0,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0,0.199945982364114,0,0,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.66376689224646,1.07057393278297,0.315404830067869,0.234282829985426,0,0,0,0,0,0.695068915744663,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.410635780069046,1.03850885836724,0.116210378459959,0,0,0,0.574072240823034,0.364182336013434,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,1.15513299888823,0,0,0,0.290012154876366,0.154048617114644,0,1.65403886981437,0.751941714077915,0,0.93749290157711,0.445160178233687,0,0,0,0,0,0.94443704049192,0,0.924100740528266,1.59691809095107,0,0.74129687641568,0.572499546967965,0.372158369359667,0.316379424718726,0.38126038784765,0.511795582622668,0,0,3.92474320099615,0.539617372749944,0.54907405947211,0.471249609382746,1.01091240786658,1.58510321173008,1.68503382495592,0.48763373908959,2.43713489631284,0,0.272999822815972,0.565621727814851,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,1.01455188481352,0.6196469961995,0.563391205064483,0,0.0982490410131212,1.07001315444375,0,0,2.96365403663912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0.994147647766298,0.281338832821026,1.33570446027487,0,0,0.398495976502139,1.38141957765574,0,0,0,1.55519793830904,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.868124974666461,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.568679216656392,0.150323419414493,0,0,1.323967823502,0.313932918407225,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0,0.264768380074501,0.677942222341597,1.23337732182076,1.39100228192093,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0.866851769704557,0.600420288709789,0.136905378891993,0,0.859530882839914,0,0,0,0,0,0,0.223171457441873,0.134366944973453,2.16179930125442,0,0,0,0,0.0984274815147488,3.38693328263138,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0.262272940674991,0.211200673038813,0,0,0,0,0.25426853765475,0,0,0,0,0,1.19271615249795,1.35974509824151,0,0,0.517131825446202,0,0,0,0,0.943225830597996,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.610131324509816,0.1251909307065,0,0.332787154610557,0.124192805882767,0,0,0,0.285465333544967,0.470531639396343,0,0,0.447764408660622,0.701139929541673,0.554805861502613,0.757612021100357,0.754703705257725,0,0,0,1.24349760466224,2.06997209985487,2.23015474029183,2.69881867298163,2.17368139626763,0.414706207840855,1.06336685823198,1.04349012362347,1.20206087197775,0,1.22061219961398,1.63663793282303,0.966695013382396,2.78420255927096,1.59238355479446,0,0.343395705182793,0.336749488765919,1.26184898228651,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,1.13503190713367,0.920529751259204,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,1.59002175326709,0,0,0.352675943690684,0,0.256916900385838,0,0.319267718114302,0.2051163642407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| ||
|short_description=p9@FRMD4A | |short_description=p9@FRMD4A | ||
}} | }} |
Latest revision as of 07:03, 17 September 2015
Short description: | p9@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FRMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -113bp_to_uc001imu.1_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | Q5T378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.13e-11 | 32 |
Schwann cell | 5.74e-10 | 2 |
smooth muscle cell of the coronary artery | 7.57e-10 | 3 |
aortic smooth muscle cell | 4.20e-08 | 10 |
muscle cell | 4.81e-08 | 55 |
smooth muscle cell | 5.16e-08 | 43 |
smooth muscle myoblast | 5.16e-08 | 43 |
muscle precursor cell | 1.81e-07 | 58 |
myoblast | 1.81e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.81e-07 | 58 |
bone matrix secreting cell | 3.67e-07 | 2 |
osteocyte | 3.67e-07 | 2 |
osteoclast | 3.67e-07 | 2 |
electrically responsive cell | 5.94e-07 | 61 |
electrically active cell | 5.94e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.50e-11 | 13 |
right ovary | 1.49e-10 | 5 |
artery | 6.39e-10 | 42 |
arterial blood vessel | 6.39e-10 | 42 |
arterial system | 6.39e-10 | 42 |
coronary artery | 7.57e-10 | 3 |
systemic artery | 9.76e-10 | 33 |
systemic arterial system | 9.76e-10 | 33 |
epithelial tube open at both ends | 1.16e-08 | 59 |
blood vessel | 1.16e-08 | 59 |
blood vasculature | 1.16e-08 | 59 |
vascular cord | 1.16e-08 | 59 |
left ovary | 2.57e-08 | 4 |
blood vessel smooth muscle | 4.20e-08 | 10 |
arterial system smooth muscle | 4.20e-08 | 10 |
artery smooth muscle tissue | 4.20e-08 | 10 |
aorta smooth muscle tissue | 4.20e-08 | 10 |
splanchnic layer of lateral plate mesoderm | 5.93e-08 | 83 |
vessel | 4.55e-07 | 68 |
skeletal muscle tissue | 8.59e-07 | 62 |
striated muscle tissue | 8.59e-07 | 62 |
myotome | 8.59e-07 | 62 |
gonad | 9.97e-07 | 21 |
indifferent external genitalia | 9.97e-07 | 21 |
indifferent gonad | 9.97e-07 | 21 |
gonad primordium | 9.97e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.33e-20 | 14 |
female reproductive organ cancer | 1.12e-09 | 27 |
reproductive organ cancer | 7.18e-09 | 29 |
connective tissue cancer | 1.96e-08 | 6 |
musculoskeletal system cancer | 1.96e-08 | 6 |
giant cell tumor | 3.67e-07 | 2 |
bone giant cell tumor | 3.67e-07 | 2 |