FFCP PHASE1:Hg19::chr14:23790822..23790881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8106 | |EntrezGene=8106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8565 | |HGNC=8565 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4T2 | |UniProt=G3V4T2 | ||
|association_with_transcript=70bp_to_ENST00000556821_5end | |association_with_transcript=70bp_to_ENST00000556821_5end | ||
|cluster_id=chr14:23790822..23790881,+ | |||
|description=CAGE_peak_4_at_PABPN1_5end | |description=CAGE_peak_4_at_PABPN1_5end | ||
|id=chr14:23790822..23790881,+ | |id=chr14:23790822..23790881,+ | ||
|ontology_enrichment_celltype=CL:0002321!1.35e-08!248;CL:0000220!3.65e-08!246 | |ontology_enrichment_celltype=CL:0002321!1.35e-08!248;CL:0000220!3.65e-08!246 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.41e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.01e-08!239;DOID:162!9.99e-08!235;DOID:0050687!5.06e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.77e-12!169;UBERON:0000924!1.30e-11!173;UBERON:0006601!1.30e-11!173;UBERON:0000119!4.61e-11!312;UBERON:0000073!5.17e-11!94;UBERON:0001016!5.17e-11!94;UBERON:0000483!8.59e-11!309;UBERON:0003075!1.04e-10!86;UBERON:0007284!1.04e-10!86;UBERON:0002346!2.03e-10!90;UBERON:0000475!6.32e-10!365;UBERON:0000481!1.03e-08!347;UBERON:0005743!1.59e-08!86;UBERON:0001017!2.17e-08!82;UBERON:0003056!2.18e-08!61;UBERON:0000033!4.36e-08!123;UBERON:0001049!7.30e-08!57;UBERON:0005068!7.30e-08!57;UBERON:0006241!7.30e-08!57;UBERON:0007135!7.30e-08!57;UBERON:0000922!1.19e-07!612;UBERON:0000955!1.21e-07!69;UBERON:0006238!1.21e-07!69;UBERON:0000153!2.18e-07!129;UBERON:0007811!2.18e-07!129;UBERON:0000923!5.43e-07!604;UBERON:0005291!5.43e-07!604;UBERON:0006598!5.43e-07!604;UBERON:0002532!5.43e-07!604;UBERON:0002616!5.49e-07!59;UBERON:0002050!9.24e-07!605;UBERON:0005423!9.24e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.14e-12,104;UBERON:0004121,1.31e-12,171;UBERON:0000924,1.31e-12,171;UBERON:0006601,1.31e-12,171;UBERON:0001016,2.90e-12,89;UBERON:0003075,1.04e-11,82;UBERON:0007284,1.04e-11,82;UBERON:0002346,1.70e-11,86;UBERON:0000119,1.18e-09,309;UBERON:0001017,1.90e-09,81;UBERON:0000483,2.19e-09,306;UBERON:0003056,2.82e-09,61;UBERON:0010314,4.90e-09,132;UBERON:0001049,1.09e-08,56;UBERON:0005068,1.09e-08,56;UBERON:0006241,1.09e-08,56;UBERON:0007135,1.09e-08,56;UBERON:0000955,2.43e-08,68;UBERON:0006238,2.43e-08,68;UBERON:0000073,4.13e-08,53;UBERON:0002616,4.13e-08,53;UBERON:0000922,1.42e-07,592;UBERON:0003528,6.21e-07,34;UBERON:0002020,6.21e-07,34 | |||
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| ||
|short_description=p4@PABPN1 | |short_description=p4@PABPN1 | ||
}} | }} |
Latest revision as of 09:33, 19 September 2015
Short description: | p4@PABPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PABPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_ENST00000556821_5end |
EntrezGene: | PABPN1 |
HGNC: | 8565 |
UniProt: | G3V4T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.41e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 1.14e-12 | 104 |
ectoderm-derived structure | 1.31e-12 | 171 |
ectoderm | 1.31e-12 | 171 |
presumptive ectoderm | 1.31e-12 | 171 |
nervous system | 2.90e-12 | 89 |
neural plate | 1.04e-11 | 82 |
presumptive neural plate | 1.04e-11 | 82 |
neurectoderm | 1.70e-11 | 86 |
cell layer | 1.18e-09 | 309 |
central nervous system | 1.90e-09 | 81 |
epithelium | 2.19e-09 | 306 |
pre-chordal neural plate | 2.82e-09 | 61 |
structure with developmental contribution from neural crest | 4.90e-09 | 132 |
neural tube | 1.09e-08 | 56 |
neural rod | 1.09e-08 | 56 |
future spinal cord | 1.09e-08 | 56 |
neural keel | 1.09e-08 | 56 |
brain | 2.43e-08 | 68 |
future brain | 2.43e-08 | 68 |
regional part of nervous system | 4.13e-08 | 53 |
regional part of brain | 4.13e-08 | 53 |
embryo | 1.42e-07 | 592 |
brain grey matter | 6.21e-07 | 34 |
gray matter | 6.21e-07 | 34 |