FFCP PHASE1:Hg19::chr10:61469446..61469466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220963 | |EntrezGene=220963 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23520 | |HGNC=23520 | ||
|TSSclassifier=strong | |||
|UniProt=E5RID1 | |UniProt=E5RID1 | ||
|association_with_transcript=-166bp_to_ENST00000490066_5end | |association_with_transcript=-166bp_to_ENST00000490066_5end | ||
|cluster_id=chr10:61469446..61469466,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_3_at_SLC16A9_5end | |description=CAGE_peak_3_at_SLC16A9_5end | ||
|id=chr10:61469446..61469466,- | |id=chr10:61469446..61469466,- | ||
|ontology_enrichment_celltype=CL:0002319!7.11e-08!25 | |ontology_enrichment_celltype=CL:0002319!7.11e-08!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.95e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.77e-22!94;UBERON:0001016!6.77e-22!94;UBERON:0001017!1.95e-21!82;UBERON:0005743!3.86e-21!86;UBERON:0007023!1.47e-17!115;UBERON:0001049!2.03e-16!57;UBERON:0005068!2.03e-16!57;UBERON:0006241!2.03e-16!57;UBERON:0007135!2.03e-16!57;UBERON:0003075!7.36e-15!86;UBERON:0007284!7.36e-15!86;UBERON:0000955!2.60e-14!69;UBERON:0006238!2.60e-14!69;UBERON:0002616!6.02e-14!59;UBERON:0002346!2.78e-13!90;UBERON:0002780!6.75e-12!41;UBERON:0001890!6.75e-12!41;UBERON:0006240!6.75e-12!41;UBERON:0001893!7.66e-12!34;UBERON:0004121!1.31e-11!169;UBERON:0003080!2.47e-11!42;UBERON:0002791!2.94e-11!33;UBERON:0002020!4.03e-11!34;UBERON:0003528!4.03e-11!34;UBERON:0000153!7.24e-11!129;UBERON:0007811!7.24e-11!129;UBERON:0000924!1.01e-10!173;UBERON:0006601!1.01e-10!173;UBERON:0001869!1.66e-10!32;UBERON:0000033!2.08e-10!123;UBERON:0003056!1.95e-09!61;UBERON:0000477!3.75e-08!286;UBERON:0000025!9.40e-08!194;UBERON:0000956!1.25e-07!25;UBERON:0000203!1.25e-07!25;UBERON:0004111!2.59e-07!241;UBERON:0000922!8.69e-07!612 | |ontology_enrichment_uberon=UBERON:0000073!6.77e-22!94;UBERON:0001016!6.77e-22!94;UBERON:0001017!1.95e-21!82;UBERON:0005743!3.86e-21!86;UBERON:0007023!1.47e-17!115;UBERON:0001049!2.03e-16!57;UBERON:0005068!2.03e-16!57;UBERON:0006241!2.03e-16!57;UBERON:0007135!2.03e-16!57;UBERON:0003075!7.36e-15!86;UBERON:0007284!7.36e-15!86;UBERON:0000955!2.60e-14!69;UBERON:0006238!2.60e-14!69;UBERON:0002616!6.02e-14!59;UBERON:0002346!2.78e-13!90;UBERON:0002780!6.75e-12!41;UBERON:0001890!6.75e-12!41;UBERON:0006240!6.75e-12!41;UBERON:0001893!7.66e-12!34;UBERON:0004121!1.31e-11!169;UBERON:0003080!2.47e-11!42;UBERON:0002791!2.94e-11!33;UBERON:0002020!4.03e-11!34;UBERON:0003528!4.03e-11!34;UBERON:0000153!7.24e-11!129;UBERON:0007811!7.24e-11!129;UBERON:0000924!1.01e-10!173;UBERON:0006601!1.01e-10!173;UBERON:0001869!1.66e-10!32;UBERON:0000033!2.08e-10!123;UBERON:0003056!1.95e-09!61;UBERON:0000477!3.75e-08!286;UBERON:0000025!9.40e-08!194;UBERON:0000956!1.25e-07!25;UBERON:0000203!1.25e-07!25;UBERON:0004111!2.59e-07!241;UBERON:0000922!8.69e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.28e-08;53!UBERON:0002616;5.28e-08;53!UBERON:0001893;8.01e-08;34!UBERON:0002780;1.10e-07;41!UBERON:0001890;1.10e-07;41!UBERON:0000956;5.18e-07;25!UBERON:0000203;5.18e-07;25!UBERON:0000349;8.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.78e-15,81;UBERON:0001016,4.61e-14,89;UBERON:0007023,1.05e-12,114;UBERON:0003075,1.52e-11,82;UBERON:0007284,1.52e-11,82;UBERON:0001049,1.73e-11,56;UBERON:0005068,1.73e-11,56;UBERON:0006241,1.73e-11,56;UBERON:0007135,1.73e-11,56;UBERON:0000073,5.41e-11,53;UBERON:0002616,5.41e-11,53;UBERON:0002346,1.10e-10,86;UBERON:0003056,8.79e-10,61;UBERON:0002780,1.34e-09,41;UBERON:0001890,1.34e-09,41;UBERON:0003080,1.34e-09,41;UBERON:0006240,1.34e-09,41;UBERON:0010314,2.30e-09,132;UBERON:0001893,2.94e-09,34;UBERON:0010371,2.12e-08,104;UBERON:0000955,3.34e-08,68;UBERON:0006238,3.34e-08,68;UBERON:0004121,4.70e-08,171;UBERON:0000924,4.70e-08,171;UBERON:0006601,4.70e-08,171;UBERON:0002791,3.17e-07,32;UBERON:0001869,3.66e-07,32;UBERON:0000956,5.04e-07,25;UBERON:0000203,5.04e-07,25;UBERON:0000349,5.77e-07,5 | |||
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|short_description=p3@SLC16A9 | |short_description=p3@SLC16A9 | ||
}} | }} |
Latest revision as of 15:48, 18 September 2015
Short description: | p3@SLC16A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC16A9_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -166bp_to_ENST00000490066_5end |
EntrezGene: | SLC16A9 |
HGNC: | 23520 |
UniProt: | E5RID1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.95e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.78e-15 | 81 |
nervous system | 4.61e-14 | 89 |
adult organism | 1.05e-12 | 114 |
neural plate | 1.52e-11 | 82 |
presumptive neural plate | 1.52e-11 | 82 |
neural tube | 1.73e-11 | 56 |
neural rod | 1.73e-11 | 56 |
future spinal cord | 1.73e-11 | 56 |
neural keel | 1.73e-11 | 56 |
regional part of nervous system | 5.41e-11 | 53 |
regional part of brain | 5.41e-11 | 53 |
neurectoderm | 1.10e-10 | 86 |
pre-chordal neural plate | 8.79e-10 | 61 |
regional part of forebrain | 1.34e-09 | 41 |
forebrain | 1.34e-09 | 41 |
anterior neural tube | 1.34e-09 | 41 |
future forebrain | 1.34e-09 | 41 |
structure with developmental contribution from neural crest | 2.30e-09 | 132 |
telencephalon | 2.94e-09 | 34 |
ecto-epithelium | 2.12e-08 | 104 |
brain | 3.34e-08 | 68 |
future brain | 3.34e-08 | 68 |
ectoderm-derived structure | 4.70e-08 | 171 |
ectoderm | 4.70e-08 | 171 |
presumptive ectoderm | 4.70e-08 | 171 |
regional part of telencephalon | 3.17e-07 | 32 |
cerebral hemisphere | 3.66e-07 | 32 |
cerebral cortex | 5.04e-07 | 25 |
pallium | 5.04e-07 | 25 |
limbic system | 5.77e-07 | 5 |