FFCP PHASE1:Hg19::chr10:72648303..72648373,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5092 | |EntrezGene=5092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8646 | |HGNC=8646 | ||
|TSSclassifier=strong | |||
|UniProt=P61457 | |UniProt=P61457 | ||
|association_with_transcript=167bp_to_ENST00000299299,NM_000281,uc001jrn.1_5end | |association_with_transcript=167bp_to_ENST00000299299,NM_000281,uc001jrn.1_5end | ||
|cluster_id=chr10:72648303..72648373,- | |||
|description=CAGE_peak_1_at_PCBD1_5end | |description=CAGE_peak_1_at_PCBD1_5end | ||
|id=chr10:72648303..72648373,- | |id=chr10:72648303..72648373,- | ||
|ontology_enrichment_celltype=CL:0000066!7.15e-39!254;CL:0000220!2.49e-17!246;CL:0002321!3.70e-17!248;CL:0000213!1.55e-16!57;CL:0000215!1.55e-16!57;CL:0002078!3.20e-15!44;CL:0000222!1.62e-14!119;CL:0000115!3.38e-13!35;CL:1000497!2.54e-10!18;CL:0002518!2.54e-10!18;CL:1000449!1.43e-09!16;CL:0000076!2.36e-09!62;CL:0002139!2.57e-09!24;CL:0000223!1.86e-08!59;CL:0000071!9.81e-08!18;CL:0002546!9.81e-08!18;CL:0002681!1.08e-07!13;CL:0002584!1.08e-07!13;CL:1000507!1.52e-07!12;CL:1000494!1.52e-07!12 | |ontology_enrichment_celltype=CL:0000066!7.15e-39!254;CL:0000220!2.49e-17!246;CL:0002321!3.70e-17!248;CL:0000213!1.55e-16!57;CL:0000215!1.55e-16!57;CL:0002078!3.20e-15!44;CL:0000222!1.62e-14!119;CL:0000115!3.38e-13!35;CL:1000497!2.54e-10!18;CL:0002518!2.54e-10!18;CL:1000449!1.43e-09!16;CL:0000076!2.36e-09!62;CL:0002139!2.57e-09!24;CL:0000223!1.86e-08!59;CL:0000071!9.81e-08!18;CL:0002546!9.81e-08!18;CL:0002681!1.08e-07!13;CL:0002584!1.08e-07!13;CL:1000507!1.52e-07!12;CL:1000494!1.52e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.14e-11;36!CL:1000497;2.79e-11;17!CL:0002518;2.79e-11;17!CL:0002078;8.89e-11;45!CL:1000449;1.46e-10;15!CL:0000213;6.57e-10;58!CL:0000215;6.57e-10;58!CL:0002139;2.66e-09;24!CL:0002681;1.16e-08;12!CL:0002584;1.16e-08;12!CL:1000507;5.67e-08;10!CL:1000494;5.67e-08;10!CL:0000071;1.01e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.01e-39,253;CL:0002321,2.42e-17,250;CL:0000213,4.24e-17,58;CL:0000215,4.24e-17,58;CL:0002078,8.48e-16,45;CL:0000222,1.20e-14,121;CL:0000115,8.92e-14,36;CL:1000497,2.69e-11,17;CL:0002518,2.69e-11,17;CL:1000449,1.41e-10,15;CL:0000076,1.05e-09,63;CL:0002139,2.57e-09,24;CL:0002681,1.12e-08,12;CL:0002584,1.12e-08,12;CL:0000223,4.06e-08,58;CL:1000507,5.67e-08,10;CL:1000494,5.67e-08,10;CL:0000071,9.81e-08,18;CL:0002546,9.81e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.01e-07;18 | |||
|ontology_enrichment_disease=DOID:305!2.77e-13!106;DOID:0050687!5.43e-10!143;DOID:299!8.07e-10!25 | |ontology_enrichment_disease=DOID:305!2.77e-13!106;DOID:0050687!5.43e-10!143;DOID:299!8.07e-10!25 | ||
|ontology_enrichment_disease_v019=DOID:299;8.12e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.77e-13,106;DOID:0050687,5.43e-10,143;DOID:299,8.07e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.44e-22!238;UBERON:0009142!1.44e-22!238;UBERON:0000481!2.96e-22!347;UBERON:0002100!3.74e-19!216;UBERON:0000119!2.33e-17!312;UBERON:0000483!2.74e-17!309;UBERON:0005177!3.88e-17!107;UBERON:0003914!1.41e-16!118;UBERON:0009569!1.98e-16!113;UBERON:0000477!4.46e-15!286;UBERON:0004921!3.71e-14!129;UBERON:0004185!3.71e-14!129;UBERON:0004119!5.16e-14!169;UBERON:0000925!5.16e-14!169;UBERON:0006595!5.16e-14!169;UBERON:0001008!5.93e-14!45;UBERON:0001007!7.96e-14!155;UBERON:0001555!7.96e-14!155;UBERON:0007026!7.96e-14!155;UBERON:0006554!1.73e-13!44;UBERON:0005256!2.51e-13!143;UBERON:0005172!2.99e-13!55;UBERON:0005173!2.99e-13!55;UBERON:0004111!4.57e-13!241;UBERON:0000490!7.14e-13!138;UBERON:0000077!3.29e-12!130;UBERON:0000475!6.54e-12!365;UBERON:0003064!1.07e-11!37;UBERON:0000466!1.27e-11!126;UBERON:0002417!1.32e-11!61;UBERON:0000916!1.32e-11!61;UBERON:0000468!8.20e-11!659;UBERON:0002113!1.90e-10!27;UBERON:0003918!1.90e-10!27;UBERON:0005095!1.90e-10!27;UBERON:0007687!1.90e-10!27;UBERON:0001041!2.93e-10!98;UBERON:0005911!3.64e-10!82;UBERON:0000058!5.69e-10!26;UBERON:0000923!9.63e-10!604;UBERON:0005291!9.63e-10!604;UBERON:0006598!9.63e-10!604;UBERON:0002532!9.63e-10!604;UBERON:0000922!9.86e-10!612;UBERON:0000926!1.11e-09!448;UBERON:0004120!1.11e-09!448;UBERON:0006603!1.11e-09!448;UBERON:0002050!1.27e-09!605;UBERON:0005423!1.27e-09!605;UBERON:0004211!1.43e-09!16;UBERON:0001285!1.43e-09!16;UBERON:0007684!1.43e-09!16;UBERON:0003220!1.43e-09!16;UBERON:0004208!1.43e-09!16;UBERON:0000467!1.80e-09!625;UBERON:0000080!1.82e-09!18;UBERON:0002120!1.82e-09!18;UBERON:0004875!1.82e-09!18;UBERON:0005721!1.82e-09!18;UBERON:0005754!1.82e-09!18;UBERON:0007297!1.82e-09!18;UBERON:0001048!2.04e-09!168;UBERON:0006555!2.15e-09!17;UBERON:0005103!2.15e-09!17;UBERON:0000083!2.15e-09!17;UBERON:0009201!2.15e-09!17;UBERON:0004819!2.15e-09!17;UBERON:0006553!2.15e-09!17;UBERON:0003074!2.15e-09!17;UBERON:0003060!2.15e-09!17;UBERON:0000480!2.44e-09!626;UBERON:0000025!2.72e-09!194;UBERON:0004876!5.49e-09!20;UBERON:0002049!7.57e-09!79;UBERON:0007798!7.57e-09!79;UBERON:0000489!1.39e-08!32;UBERON:0006914!2.39e-08!25;UBERON:0001851!2.51e-08!16;UBERON:0000487!3.78e-08!22;UBERON:0000055!4.70e-08!69;UBERON:0003103!5.44e-08!69;UBERON:0001986!9.81e-08!18;UBERON:0004638!9.81e-08!18;UBERON:0004852!9.81e-08!18;UBERON:0003887!1.06e-07!21;UBERON:0001225!1.08e-07!13;UBERON:0008987!1.08e-07!13;UBERON:0009773!1.52e-07!12;UBERON:0001231!1.52e-07!12;UBERON:0004810!1.52e-07!12;UBERON:0000464!1.70e-07!104;UBERON:0000063!4.16e-07!97;UBERON:0000353!4.73e-07!17;UBERON:0003929!5.17e-07!54;UBERON:0005157!8.86e-07!51 | |ontology_enrichment_uberon=UBERON:0003104!1.44e-22!238;UBERON:0009142!1.44e-22!238;UBERON:0000481!2.96e-22!347;UBERON:0002100!3.74e-19!216;UBERON:0000119!2.33e-17!312;UBERON:0000483!2.74e-17!309;UBERON:0005177!3.88e-17!107;UBERON:0003914!1.41e-16!118;UBERON:0009569!1.98e-16!113;UBERON:0000477!4.46e-15!286;UBERON:0004921!3.71e-14!129;UBERON:0004185!3.71e-14!129;UBERON:0004119!5.16e-14!169;UBERON:0000925!5.16e-14!169;UBERON:0006595!5.16e-14!169;UBERON:0001008!5.93e-14!45;UBERON:0001007!7.96e-14!155;UBERON:0001555!7.96e-14!155;UBERON:0007026!7.96e-14!155;UBERON:0006554!1.73e-13!44;UBERON:0005256!2.51e-13!143;UBERON:0005172!2.99e-13!55;UBERON:0005173!2.99e-13!55;UBERON:0004111!4.57e-13!241;UBERON:0000490!7.14e-13!138;UBERON:0000077!3.29e-12!130;UBERON:0000475!6.54e-12!365;UBERON:0003064!1.07e-11!37;UBERON:0000466!1.27e-11!126;UBERON:0002417!1.32e-11!61;UBERON:0000916!1.32e-11!61;UBERON:0000468!8.20e-11!659;UBERON:0002113!1.90e-10!27;UBERON:0003918!1.90e-10!27;UBERON:0005095!1.90e-10!27;UBERON:0007687!1.90e-10!27;UBERON:0001041!2.93e-10!98;UBERON:0005911!3.64e-10!82;UBERON:0000058!5.69e-10!26;UBERON:0000923!9.63e-10!604;UBERON:0005291!9.63e-10!604;UBERON:0006598!9.63e-10!604;UBERON:0002532!9.63e-10!604;UBERON:0000922!9.86e-10!612;UBERON:0000926!1.11e-09!448;UBERON:0004120!1.11e-09!448;UBERON:0006603!1.11e-09!448;UBERON:0002050!1.27e-09!605;UBERON:0005423!1.27e-09!605;UBERON:0004211!1.43e-09!16;UBERON:0001285!1.43e-09!16;UBERON:0007684!1.43e-09!16;UBERON:0003220!1.43e-09!16;UBERON:0004208!1.43e-09!16;UBERON:0000467!1.80e-09!625;UBERON:0000080!1.82e-09!18;UBERON:0002120!1.82e-09!18;UBERON:0004875!1.82e-09!18;UBERON:0005721!1.82e-09!18;UBERON:0005754!1.82e-09!18;UBERON:0007297!1.82e-09!18;UBERON:0001048!2.04e-09!168;UBERON:0006555!2.15e-09!17;UBERON:0005103!2.15e-09!17;UBERON:0000083!2.15e-09!17;UBERON:0009201!2.15e-09!17;UBERON:0004819!2.15e-09!17;UBERON:0006553!2.15e-09!17;UBERON:0003074!2.15e-09!17;UBERON:0003060!2.15e-09!17;UBERON:0000480!2.44e-09!626;UBERON:0000025!2.72e-09!194;UBERON:0004876!5.49e-09!20;UBERON:0002049!7.57e-09!79;UBERON:0007798!7.57e-09!79;UBERON:0000489!1.39e-08!32;UBERON:0006914!2.39e-08!25;UBERON:0001851!2.51e-08!16;UBERON:0000487!3.78e-08!22;UBERON:0000055!4.70e-08!69;UBERON:0003103!5.44e-08!69;UBERON:0001986!9.81e-08!18;UBERON:0004638!9.81e-08!18;UBERON:0004852!9.81e-08!18;UBERON:0003887!1.06e-07!21;UBERON:0001225!1.08e-07!13;UBERON:0008987!1.08e-07!13;UBERON:0009773!1.52e-07!12;UBERON:0001231!1.52e-07!12;UBERON:0004810!1.52e-07!12;UBERON:0000464!1.70e-07!104;UBERON:0000063!4.16e-07!97;UBERON:0000353!4.73e-07!17;UBERON:0003929!5.17e-07!54;UBERON:0005157!8.86e-07!51 | ||
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023,57.8510696398163,21.9267079434801,47.8902214204205,31.4654655900717,34.8081461267949,67.1730913707852,78.3372490693424,35.7659201152013,177.375303516704,98.8450824911852,96.779578794148,72.7476729840156,59.3927120002767,85.0855464966631,53.2744487808567,61.7156793242766,23.8675829268993,17.3370353940911,19.8138695274231,30.1191833562385,16.6070564487064,46.4146676733554,38.3815537247799,55.8564802544508,73.1021752597271,43.0723814746088,77.2757731931096,95.7174087344553,94.4015264979121,83.3075058835406,34.2284889365283,138.63017993767,119.435304377751,130.958798967673,119.236869078053,166.539298722955,29.3816462268272,24.6521203840884,32.5526140606666,31.5076170991438,24.6195591509049,24.5109799437219,21.597493588944,25.5354645004123,34.7487464083901,81.5106290866216,113.559024218145,84.3994323092119,52.0609659040674,144.864170180939,31.474092360389,95.7691737340312,90.7065999400641,76.5348298340797,75.4769446437661,89.8790350849319,66.6238214623195,75.4300206843671,28.6502897415193,26.2397553549549,18.1299346432201,278.302691754679,159.008266694666,34.518549348534,38.8763849123509,145.937072715333,191.004871047818,62.7909985898045,58.9516144123747,53.4368381397882,31.7546253959649,27.2704052019163,31.6660755790329,31.2787216307389,75.6184746683569,47.8817697583357,61.5754609294558,95.0830629058433,80.5687513763702,24.8099090390756,26.9678045433339,28.4183412703755,22.3629586319128,38.8251680378983,52.3472676795862,47.1768845132547,21.8715713933687,32.7562093889959,27.6901373538618,70.1092142700552,48.7068302039157,12.6081294891418,38.0599747361529,37.3941295755559,29.9595165211411,40.342840123594,42.5149753961852,53.3886732957922,88.3322664012125,37.6565000170465,18.3415896687681,30.4581608978646,37.1161467491427,33.7352334122703,28.723647022108,47.6912139016984,54.4975514843889,37.5656444504448,53.9424816300014,53.3127297036314,21.9710195930517,23.6403256963327,53.5978679642017,35.730599510644,43.3924518681491,24.0016658797892,21.9773251316987,29.9707045001668,25.2369796457302,77.6257916541432,59.6147624022293,50.1109040573206,35.3661243799145,69.9197872457979,54.3315484004358,59.4574952390538,135.255033856506,76.0915652038114,80.9236288432135,81.409724150326,77.7135227004134,240.354544435494,135.40869395863,64.7221706657824,26.4073613049806,22.4089355165297,36.4049662458615,29.6053363603078,24.8983485123274,44.2391235756695,87.271906947113,33.7978698994832,49.5049625780814,32.3764161762333,59.0216591709509,60.5708576328556,40.5650572386389,26.7493221814178,37.9846282771845,37.954333611632,50.3251013938868,81.1427611766663,40.9055397189201,42.7275589404383,38.0482796275137,11.1728983594649,36.8885046757966,5.914630875094,36.8262544211316,40.9104094681193,53.8992040141632,37.3814090061394,9.91876034279095,31.1286025161445,33.4339673712431,19.661592305294,39.0738476422831,44.8902294856546,7.13847101295772,54.1775406125661,112.661085797092,10.8222873127791,76.5935166576742,0,73.1781521623707,76.781661736882,61.8228899030895,22.9943778322013,224.294521223898,11.785801251664,50.76929442813,90.6357808510488,33.2284916322502,15.6215619722769,27.2826571381563,37.5421596347928,15.3152946525101,65.2426742560047,49.6211178389294,67.8863003228136,44.9723745291375,34.8206193320886,63.8939072215765,33.3831082330147,46.8984114183673,35.8357575457061,35.6073021547358,20.2355851136154,51.8609062613226,34.9911155354357,116.302739429825,135.146153298864,91.5229462636993,31.4231179832004,123.319751858067,54.7895232305697,108.827505974185,81.2177869407985,59.1825785782715,39.3453893214489,46.8452944233545,34.9455127328185,28.8616091302891,37.2989095493466,38.7530943003266,22.1203091780509,69.2666047700647,49.5811083061069,52.406243926882,65.624992779594,119.593785379994,71.6576750884579,65.9321867894429,127.291481385888,134.956571220959,169.465915725355,31.0765841850189,69.5027202416792,74.2281236056447,33.5140585210806,78.3697202598054,59.8841833235718,72.6601754650944,51.6163594918047,61.3468083439495,41.6657448244019,54.7936522566407,85.8939072780552,33.8628453380296,57.3647072904139,61.2759022464227,25.7164091920578,45.1510528497171,41.8429170307566,28.0379739234898,31.3906286052711,25.9765288533516,46.8724021287917,41.6030676951182,19.7621128160787,41.2440624782325,44.5505196830375,40.8269062230041,32.6814249585309,66.7373708077171,44.8063920358128,13.0905207102113,83.5862408014333,33.8515466531744,50.839319149456,55.376199951845,52.4852327313928,20.9789898170295,44.2177768529915,22.13157605401,23.5151316633693,16.4491870167372,17.8002352897586,33.2668485178071,24.3847358442122,25.7042526232222,29.8921358040877,44.992370181107,38.5664378971259,11.3030592213011,17.5671441457278,66.3820626477231,108.582052022549,44.6678987597665,49.6394185205072,33.8810968074428,37.1783332640523,58.3818751896385,35.2619977938774,14.6525883499754,65.7440450606727,13.5150597600858,140.037490084169,46.9281884806909,54.030718328827,29.2965248387332,111.181381288981,47.0980677003001,56.7406231376722 | ||
|short_description=p1@PCBD1 | |short_description=p1@PCBD1 | ||
}} | }} |
Latest revision as of 03:05, 19 September 2015
Short description: | p1@PCBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCBD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 167bp_to_ENST00000299299, NM_000281, uc001jrn.1_5end |
EntrezGene: | PCBD1 |
HGNC: | 8646 |
UniProt: | P61457 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.01e-39 | 253 |
embryonic cell | 2.42e-17 | 250 |
lining cell | 4.24e-17 | 58 |
barrier cell | 4.24e-17 | 58 |
meso-epithelial cell | 8.48e-16 | 45 |
mesodermal cell | 1.20e-14 | 121 |
endothelial cell | 8.92e-14 | 36 |
kidney cell | 2.69e-11 | 17 |
kidney epithelial cell | 2.69e-11 | 17 |
epithelial cell of nephron | 1.41e-10 | 15 |
squamous epithelial cell | 1.05e-09 | 63 |
endothelial cell of vascular tree | 2.57e-09 | 24 |
kidney cortical cell | 1.12e-08 | 12 |
renal cortical epithelial cell | 1.12e-08 | 12 |
endodermal cell | 4.06e-08 | 58 |
kidney tubule cell | 5.67e-08 | 10 |
nephron tubule epithelial cell | 5.67e-08 | 10 |
blood vessel endothelial cell | 9.81e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.81e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.77e-13 | 106 |
cell type cancer | 5.43e-10 | 143 |
adenocarcinoma | 8.07e-10 | 25 |