FFCP PHASE1:Hg19::chr15:39889119..39889166,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39889119..39889166,+ | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39889119..39889166,+ | |description=CAGE_peak_at_chr15:39889119..39889166,+ | ||
|id=chr15:39889119..39889166,+ | |id=chr15:39889119..39889166,+ | ||
|ontology_enrichment_celltype=CL:0000222!1.63e-16!119;CL:0000055!5.58e-16!180;CL:0002371!7.70e-15!591;CL:0000057!4.81e-13!75;CL:0000115!3.51e-12!35;CL:0000220!3.73e-12!246;CL:0000144!3.75e-12!625;CL:0000548!4.12e-12!679;CL:0000004!4.12e-12!679;CL:0000255!4.12e-12!679;CL:0000012!1.07e-11!682;CL:0002321!1.33e-11!248;CL:0002139!2.91e-11!24;CL:0002078!2.23e-10!44;CL:0000192!4.46e-09!42;CL:0000514!4.46e-09!42;CL:0000213!1.35e-08!57;CL:0000215!1.35e-08!57;CL:0000071!1.55e-08!18;CL:0002546!1.55e-08!18;CL:0000680!1.73e-08!57;CL:0000056!1.73e-08!57;CL:0000355!1.73e-08!57;CL:0000359!3.06e-08!32;CL:0000187!7.63e-08!54;CL:0000183!1.49e-07!59 | |ontology_enrichment_celltype=CL:0000222!1.63e-16!119;CL:0000055!5.58e-16!180;CL:0002371!7.70e-15!591;CL:0000057!4.81e-13!75;CL:0000115!3.51e-12!35;CL:0000220!3.73e-12!246;CL:0000144!3.75e-12!625;CL:0000548!4.12e-12!679;CL:0000004!4.12e-12!679;CL:0000255!4.12e-12!679;CL:0000012!1.07e-11!682;CL:0002321!1.33e-11!248;CL:0002139!2.91e-11!24;CL:0002078!2.23e-10!44;CL:0000192!4.46e-09!42;CL:0000514!4.46e-09!42;CL:0000213!1.35e-08!57;CL:0000215!1.35e-08!57;CL:0000071!1.55e-08!18;CL:0002546!1.55e-08!18;CL:0000680!1.73e-08!57;CL:0000056!1.73e-08!57;CL:0000355!1.73e-08!57;CL:0000359!3.06e-08!32;CL:0000187!7.63e-08!54;CL:0000183!1.49e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.51e-13;24!CL:0000115;1.14e-12;36!CL:0000071;5.56e-10;18!CL:0000359;5.34e-09;32!CL:0002078;1.81e-07;45!CL:0000192;2.78e-07;43!CL:0000349;4.28e-07;19!CL:1000413;7.08e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.31e-16,121;CL:0000115,5.39e-15,36;CL:0002139,1.57e-13,24;CL:0000057,2.51e-13,76;CL:0002078,2.54e-11,45;CL:0000192,2.39e-10,43;CL:0000514,2.39e-10,43;CL:0000071,3.62e-10,18;CL:0002546,3.62e-10,18;CL:0000359,9.02e-10,32;CL:0002321,4.39e-09,250;CL:0000213,1.17e-08,58;CL:0000215,1.17e-08,58;CL:0000680,4.08e-08,58;CL:0000056,4.08e-08,58;CL:0000355,4.08e-08,58;CL:0000187,2.24e-07,55;CL:0000723,3.40e-07,433;CL:0000349,5.70e-07,19;CL:0000048,5.91e-07,427;CL:1000413,7.01e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;5.56e-10;18!CL:0000514;2.78e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!9.54e-19!79;UBERON:0007798!9.54e-19!79;UBERON:0000055!3.60e-18!69;UBERON:0004872!1.13e-17!84;UBERON:0001981!9.72e-17!60;UBERON:0007500!9.72e-17!60;UBERON:0004537!9.72e-17!60;UBERON:0006965!9.72e-17!60;UBERON:0001009!9.53e-15!113;UBERON:0003914!1.77e-14!118;UBERON:0004535!2.27e-14!110;UBERON:0000467!6.43e-13!625;UBERON:0000480!7.16e-13!626;UBERON:0000468!1.45e-12!659;UBERON:0000490!1.54e-12!138;UBERON:0001637!1.83e-12!42;UBERON:0003509!1.83e-12!42;UBERON:0004572!1.83e-12!42;UBERON:0000926!5.10e-11!448;UBERON:0004120!5.10e-11!448;UBERON:0006603!5.10e-11!448;UBERON:0002100!2.09e-10!216;UBERON:0005256!7.95e-10!143;UBERON:0004573!2.62e-09!33;UBERON:0004571!2.62e-09!33;UBERON:0000914!5.78e-09!83;UBERON:0002329!5.78e-09!83;UBERON:0003077!5.78e-09!83;UBERON:0003059!5.78e-09!83;UBERON:0007282!5.78e-09!83;UBERON:0009618!5.78e-09!83;UBERON:0007285!5.78e-09!83;UBERON:0000486!9.15e-09!82;UBERON:0001986!1.55e-08!18;UBERON:0004638!1.55e-08!18;UBERON:0004852!1.55e-08!18;UBERON:0000487!5.77e-08!22;UBERON:0003081!9.02e-08!216;UBERON:0003102!1.00e-07!95;UBERON:0001134!3.14e-07!61;UBERON:0002036!3.14e-07!61;UBERON:0003082!3.14e-07!61;UBERON:0004290!3.15e-07!70;UBERON:0002385!4.20e-07!63;UBERON:0001015!4.20e-07!63;UBERON:0000383!4.20e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.55e-11;42!UBERON:0003509;3.55e-11;42!UBERON:0004572;3.55e-11;42!UBERON:0007500;1.58e-10;56!UBERON:0001981;1.58e-10;56!UBERON:0004537;1.58e-10;56!UBERON:0004638;5.56e-10;18!UBERON:0001986;5.56e-10;18!UBERON:0004852;5.56e-10;18!UBERON:0000055;5.89e-10;65!UBERON:0004573;1.16e-09;33!UBERON:0004571;1.16e-09;33!UBERON:0000487;1.30e-09;22!UBERON:0006914;1.43e-07;25!UBERON:0002049;1.49e-07;75!UBERON:0007798;1.49e-07;75!UBERON:0003915;7.08e-07;9!UBERON:0004700;7.08e-07;9!UBERON:0001917;7.08e-07;9!UBERON:0000947;7.92e-07;21!UBERON:0010191;7.92e-07;21!UBERON:0003914;8.22e-07;74 | |||
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|phase1_expression=32.5204298894296,22.4805550085532,18.0421637242843,21.0153926541574,10.2801051718276,26.1701557230111,5.06599756336621,1.26343974685366,0,5.89761447603621,2.09340350391728,11.5773927228991,7.64924236862515,0.37129905888014,1.32558950291166,11.4295274896802,10.2458069764076,15.3365118981348,10.7345215733912,0.123121058076788,0.408001382488506,0.313454721478088,0.572471974262113,0.547497700291537,0.87879847716362,0,0,0,1.96682138424452,1.15148819429164,2.94150634300544,0.919421224478927,4.819294700452,1.10926203050036,0,0,0.293600439334847,3.32397245119126,4.8130667392834,0.434021741431704,0,0.32389366601898,1.54545340580512,2.32637182047304,0.377875943688809,0.242584061187816,13.0160260667183,1.23350366406548,0,12.9461576544968,1.0246428261164,1.41889337933151,14.479318590938,0,0,6.21199720490596,0.818718450173537,1.34834090667051,11.3251040177234,3.85114832491312,5.75403413219137,4.28806690242731,0.797854630486527,1.27867425159808,15.6712988859435,3.40431134814684,3.73693349397345,13.3161792586074,1.5644487552606,1.73751075764093,13.3187890579341,1.84138817993782,2.21523671208619,0,0,0,0.112328631146495,2.70318407114711,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,5.24236503558474,1.44575660953827,6.51739283826656,1.59331170856906,1.5905718941022,5.83961844363163,0.378139268656271,1.10864698731282,0.790513071238134,0.130979075497713,2.18577172975525,0.370784442784429,0,0,0,0.238490624305342,0,0,8.14925870203491,5.16140757063675,19.4398680900253,7.91431118693613,6.71199097935849,8.52865930014209,8.35979866147242,6.71883573840255,4.26919515224052,7.36385348082274,4.43112248820062,15.2054421143703,6.58967555380058,9.92690316933846,15.3926970097534,6.42958043645374,3.59246996201872,6.41885438754937,1.53316637465883,1.89853131913626,3.48083313467774,0,0,6.10531672999548,75.5397366576884,7.72446121153937,9.00382429529888,3.15520282823695,0.709336764396714,2.24271040056923,12.8098794875646,11.5933747756065,2.17847724779836,1.0776853765575,2.28846664358842,1.05950199351452,0.576175924479999,0.70296429550139,0,1.71141546463335,0.149448680551801,0,0.647491777472526,0.280901613404497,2.24569588380383,0.368502951935304,1.13658359293342,13.0680314301026,32.8865015940481,0,0.718618141816238,0.673344455816265,0.250237039743928,1.10825646193673,13.608306247306,23.5995602765245,24.0380894250555,3.28953331164061,14.5305604907978,20.5015093265825,15.0471649823289,5.40163972951924,5.87399416659102,9.53269998168828,11.353128236227,22.2784758558471,5.65134629934952,3.02920529092937,12.4267363167104,4.0411514204703,11.3603069605317,3.92933183087797,9.15627198476633,3.28543450377605,12.8190676677692,7.4569194801141,0,0,0,0,0,0.36497735907583,9.38697193978896,16.0810234548221,5.52539685409922,10.6804623447355,7.94067429836544,0.709840800239063,0.842923450390509,0.241011029883482,1.10293972732394,0.435758888184812,1.18635309555548,0.674156540800822,0.784885860501384,1.53898862778556,2.95262181849859,4.20725321410337,1.2347220339942,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0,1.20097467208968,3.62175941848464,1.1240175325762,1.50793458617446,1.29623823221941,0,0,0,0,1.6437217193015,7.65142173133691,22.6862901162539,10.6542325251375,0,0,0,0,0,1.87467667973554,13.102605999511,4.39502801451398,4.65704318054811,3.77824120068151,1.91691339582606,0,0,0,0,0,0.253991577168676,0,0,1.71072446022705,0.925447434329912,0,0,0,0,0.07333828582095,3.10252117818667,0,0,8.77595784730073,6.24044621468197,0.771622122786426,0,1.0656887160644,0.857867961948885,0,4.11620168390384,0.977208552881205,0.710783897485092,1.58390374586686,0,0.871533458600294,0.099972991182057,0,0,0,5.27174682081482,0,5.70547620162874,1.59259437334337,2.67119219315498,5.37182889719687,0.112085143993527,0,0.215627574859517,0,0,0,0,0.335032530668698,0,0.749007023947182,0,0.414415513436035,0.36807447515742,0.500170521059677,1.08506009479894,32.0275126757443,43.3582442777103,34.2214240623638,47.4422730720488,7.82459859292069,6.82222512167955,2.0694614258501,1.32845119707087,2.58116835958384,5.12613325361689,0,2.05886054286514,1.03384013061444,0.647142602455851,0.74709290462411,3.03127571446259,8.32177197552485,1.20956117331872,26.5475354366091,66.1421104871549,29.4693099154727,14.3515847166385,29.1673131968021,35.0661548093064,7.42090332224955,3.85524234506639,3.01854933032316,1.06765302817952,0.519254429183621,1.39452454151951,0,9.02279116364782,0.460404944679482,3.09999010044438,0.910455840033585,2.09799063935079,0,0.0770153371044148,0,0,0.211103257785751,3.4120015221269,4.25234263191289,14.2504504627412,16.9649977959318,0.270946437543853,0.501689773854853,0.509752546090077,0,0.671624264166535,0,0,0,0.328014645699706,0.650756789328606,0.9273691048295,0.27470839445503,0.082509499920588,1.72279661398852,3.90036147621913,1.6068392984416,0.48335359146061,0.308097234229289,0,0.689182862422653,1.07420244868274,0.43505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| ||
|short_description=p@chr15:39889119..39889166,+ | |short_description=p@chr15:39889119..39889166,+ | ||
}} | }} |
Latest revision as of 01:23, 25 July 2015
Short description: | p@chr15:39889119..39889166, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39889119..39889166, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.31e-16 | 121 |
endothelial cell | 5.39e-15 | 36 |
endothelial cell of vascular tree | 1.57e-13 | 24 |
fibroblast | 2.51e-13 | 76 |
meso-epithelial cell | 2.54e-11 | 45 |
smooth muscle cell | 2.39e-10 | 43 |
smooth muscle myoblast | 2.39e-10 | 43 |
blood vessel endothelial cell | 3.62e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.62e-10 | 18 |
vascular associated smooth muscle cell | 9.02e-10 | 32 |
embryonic cell | 4.39e-09 | 250 |
lining cell | 1.17e-08 | 58 |
barrier cell | 1.17e-08 | 58 |
muscle precursor cell | 4.08e-08 | 58 |
myoblast | 4.08e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.08e-08 | 58 |
muscle cell | 2.24e-07 | 55 |
somatic stem cell | 3.40e-07 | 433 |
extraembryonic cell | 5.70e-07 | 19 |
multi fate stem cell | 5.91e-07 | 427 |
endothelial cell of artery | 7.01e-07 | 9 |