FFCP PHASE1:Hg19::chr10:111967345..111967422,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:111967345..111967422,+
|short_description=p1@MXI1
|description=CAGE_peak_1_at_MXI1_5end
|association_with_transcript=0bp_to_ENST00000332674,NM_130439,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4601 | |EntrezGene=4601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7534 | |HGNC=7534 | ||
|TSSclassifier=strong | |||
|UniProt=P50539 | |UniProt=P50539 | ||
|association_with_transcript=0bp_to_ENST00000332674,NM_130439,uc001kyy.2_5end | |||
|cluster_id=chr10:111967345..111967422,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_MXI1_5end | |||
|id=chr10:111967345..111967422,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.67e-25!115;UBERON:0001049!1.11e-17!57;UBERON:0005068!1.11e-17!57;UBERON:0006241!1.11e-17!57;UBERON:0007135!1.11e-17!57;UBERON:0001017!2.75e-16!82;UBERON:0000073!6.13e-16!94;UBERON:0001016!6.13e-16!94;UBERON:0005743!1.37e-15!86;UBERON:0002616!1.24e-14!59;UBERON:0002780!2.65e-14!41;UBERON:0001890!2.65e-14!41;UBERON:0006240!2.65e-14!41;UBERON:0003080!4.41e-14!42;UBERON:0000955!7.53e-14!69;UBERON:0006238!7.53e-14!69;UBERON:0002346!2.77e-13!90;UBERON:0002020!1.62e-12!34;UBERON:0003528!1.62e-12!34;UBERON:0003075!1.69e-12!86;UBERON:0007284!1.69e-12!86;UBERON:0001893!2.60e-12!34;UBERON:0002791!4.39e-12!33;UBERON:0001869!1.25e-11!32;UBERON:0002619!1.01e-10!22;UBERON:0001950!7.40e-10!20;UBERON:0003056!2.84e-09!61;UBERON:0000956!5.58e-09!25;UBERON:0000203!5.58e-09!25;UBERON:0000178!2.34e-07!15;UBERON:0000179!2.34e-07!15;UBERON:0000463!2.34e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.01e-10;22!UBERON:0002780;1.25e-10;41!UBERON:0001890;1.25e-10;41!UBERON:0003528;1.30e-10;34!UBERON:0002020;1.30e-10;34!UBERON:0001893;1.45e-10;34!UBERON:0002791;1.62e-10;32!UBERON:0001869;1.71e-10;32!UBERON:0000073;4.00e-10;53!UBERON:0002616;4.00e-10;53!UBERON:0001950;7.43e-10;20!UBERON:0000956;5.73e-09;25!UBERON:0000203;5.73e-09;25!UBERON:0001017;7.10e-08;75!UBERON:0001016;8.65e-08;83!UBERON:0000178;2.60e-07;15!UBERON:0000179;2.60e-07;15!UBERON:0000463;2.60e-07;15!UBERON:0000955;3.66e-07;68!UBERON:0007023;6.54e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.17e-24,114;UBERON:0001049,6.94e-18,56;UBERON:0005068,6.94e-18,56;UBERON:0006241,6.94e-18,56;UBERON:0007135,6.94e-18,56;UBERON:0001016,1.11e-16,89;UBERON:0000073,1.18e-16,53;UBERON:0002616,1.18e-16,53;UBERON:0001017,2.12e-16,81;UBERON:0002780,2.65e-14,41;UBERON:0001890,2.65e-14,41;UBERON:0003080,2.65e-14,41;UBERON:0006240,2.65e-14,41;UBERON:0002346,5.36e-14,86;UBERON:0000955,5.80e-14,68;UBERON:0006238,5.80e-14,68;UBERON:0003075,3.34e-13,82;UBERON:0007284,3.34e-13,82;UBERON:0003528,1.62e-12,34;UBERON:0002020,1.62e-12,34;UBERON:0001893,2.60e-12,34;UBERON:0002791,1.12e-11,32;UBERON:0001869,1.25e-11,32;UBERON:0002619,1.01e-10,22;UBERON:0001950,7.39e-10,20;UBERON:0003056,1.44e-09,61;UBERON:0010371,4.31e-09,104;UBERON:0000956,5.58e-09,25;UBERON:0000203,5.58e-09,25;UBERON:0000178,2.34e-07,15;UBERON:0000179,2.34e-07,15;UBERON:0000463,2.34e-07,15 | |||
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| ||
|short_description=p1@MXI1 | |||
}} | }} |
Latest revision as of 08:07, 16 September 2015
Short description: | p1@MXI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MXI1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000332674, NM_130439, uc001kyy.2_5end |
EntrezGene: | MXI1 |
HGNC: | 7534 |
UniProt: | P50539 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.17e-24 | 114 |
neural tube | 6.94e-18 | 56 |
neural rod | 6.94e-18 | 56 |
future spinal cord | 6.94e-18 | 56 |
neural keel | 6.94e-18 | 56 |
nervous system | 1.11e-16 | 89 |
regional part of nervous system | 1.18e-16 | 53 |
regional part of brain | 1.18e-16 | 53 |
central nervous system | 2.12e-16 | 81 |
regional part of forebrain | 2.65e-14 | 41 |
forebrain | 2.65e-14 | 41 |
anterior neural tube | 2.65e-14 | 41 |
future forebrain | 2.65e-14 | 41 |
neurectoderm | 5.36e-14 | 86 |
brain | 5.80e-14 | 68 |
future brain | 5.80e-14 | 68 |
neural plate | 3.34e-13 | 82 |
presumptive neural plate | 3.34e-13 | 82 |
brain grey matter | 1.62e-12 | 34 |
gray matter | 1.62e-12 | 34 |
telencephalon | 2.60e-12 | 34 |
regional part of telencephalon | 1.12e-11 | 32 |
cerebral hemisphere | 1.25e-11 | 32 |
regional part of cerebral cortex | 1.01e-10 | 22 |
neocortex | 7.39e-10 | 20 |
pre-chordal neural plate | 1.44e-09 | 61 |
ecto-epithelium | 4.31e-09 | 104 |
cerebral cortex | 5.58e-09 | 25 |
pallium | 5.58e-09 | 25 |
blood | 2.34e-07 | 15 |
haemolymphatic fluid | 2.34e-07 | 15 |
organism substance | 2.34e-07 | 15 |