FFCP PHASE1:Hg19::chr11:3860555..3860570,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:3860555..3860570,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:3860555..3860570,+ | |description=CAGE_peak_at_chr11:3860555..3860570,+ | ||
|id=chr11:3860555..3860570,+ | |id=chr11:3860555..3860570,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.04e-76!42;CL:0000738!2.52e-75!140;CL:0000860!1.19e-70!45;CL:0000037!1.41e-67!172;CL:0000566!1.41e-67!172;CL:0000766!2.09e-64!76;CL:0000988!2.66e-64!182;CL:0002032!1.56e-63!165;CL:0000837!1.56e-63!165;CL:0002031!6.53e-61!124;CL:0002087!6.60e-60!119;CL:0000557!7.15e-53!71;CL:0002009!2.58e-51!65;CL:0000763!3.89e-51!112;CL:0000049!3.89e-51!112;CL:0000839!1.62e-48!70;CL:0002194!7.83e-48!63;CL:0000576!7.83e-48!63;CL:0000040!7.83e-48!63;CL:0000559!7.83e-48!63;CL:0000134!1.47e-20!358;CL:0002320!9.86e-20!365;CL:0000219!1.68e-17!390;CL:0002393!2.98e-17!9;CL:0002397!2.98e-17!9;CL:0000094!1.22e-16!8;CL:0000048!5.20e-14!430;CL:0000034!1.51e-13!444;CL:0000723!1.64e-13!436;CL:0000081!1.34e-11!11;CL:0000838!1.56e-11!52;CL:0000542!3.32e-11!53;CL:0000051!3.32e-11!53;CL:0000775!8.42e-08!3;CL:0000624!3.73e-07!6;CL:0000875!9.94e-07!3;CL:0002396!9.94e-07!3 | |ontology_enrichment_celltype=CL:0002057!1.04e-76!42;CL:0000738!2.52e-75!140;CL:0000860!1.19e-70!45;CL:0000037!1.41e-67!172;CL:0000566!1.41e-67!172;CL:0000766!2.09e-64!76;CL:0000988!2.66e-64!182;CL:0002032!1.56e-63!165;CL:0000837!1.56e-63!165;CL:0002031!6.53e-61!124;CL:0002087!6.60e-60!119;CL:0000557!7.15e-53!71;CL:0002009!2.58e-51!65;CL:0000763!3.89e-51!112;CL:0000049!3.89e-51!112;CL:0000839!1.62e-48!70;CL:0002194!7.83e-48!63;CL:0000576!7.83e-48!63;CL:0000040!7.83e-48!63;CL:0000559!7.83e-48!63;CL:0000134!1.47e-20!358;CL:0002320!9.86e-20!365;CL:0000219!1.68e-17!390;CL:0002393!2.98e-17!9;CL:0002397!2.98e-17!9;CL:0000094!1.22e-16!8;CL:0000048!5.20e-14!430;CL:0000034!1.51e-13!444;CL:0000723!1.64e-13!436;CL:0000081!1.34e-11!11;CL:0000838!1.56e-11!52;CL:0000542!3.32e-11!53;CL:0000051!3.32e-11!53;CL:0000775!8.42e-08!3;CL:0000624!3.73e-07!6;CL:0000875!9.94e-07!3;CL:0002396!9.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-60;33!CL:0002057;2.11e-60;33!CL:0000473;1.49e-42;39!CL:0000234;1.49e-42;39!CL:0000766;8.17e-38;69!CL:0000576;3.67e-37;48!CL:0000094;8.37e-21;8!CL:0002087;2.34e-16;104!CL:0000775;3.20e-15;3!CL:0000081;5.99e-15;11!CL:0000763;1.81e-14;100!CL:0002393;3.49e-12;6!CL:0002397;3.49e-12;6!CL:0000771;1.27e-10;2!CL:0000738;2.02e-10;136!CL:0001014;5.24e-10;2!CL:0001016;5.24e-10;2!CL:0000988;5.49e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-75,42;CL:0002057,1.62e-75,42;CL:0000766,3.48e-67,72;CL:0000473,2.97e-65,48;CL:0000234,2.97e-65,48;CL:0002009,4.76e-57,61;CL:0000557,3.17e-55,67;CL:0002194,6.94e-51,59;CL:0000576,6.94e-51,59;CL:0000040,6.94e-51,59;CL:0000559,6.94e-51,59;CL:0000839,1.79e-48,66;CL:0000763,3.50e-48,108;CL:0000049,3.50e-48,108;CL:0000738,2.95e-46,136;CL:0000037,6.46e-36,168;CL:0000988,1.12e-33,177;CL:0002032,1.17e-33,161;CL:0000837,1.17e-33,161;CL:0002031,3.93e-32,120;CL:0002087,2.37e-31,115;CL:0000094,7.37e-21,8;CL:0000775,3.22e-15,3;CL:0000081,5.47e-15,11;CL:0000134,1.21e-12,354;CL:0002320,3.13e-12,361;CL:0002393,3.75e-12,9;CL:0002397,3.75e-12,9;CL:0000219,8.77e-11,386;CL:0000771,1.27e-10,2;CL:0001014,4.20e-10,2;CL:0001016,4.20e-10,2;CL:0000034,3.37e-09,441;CL:0000048,5.17e-09,427;CL:0000723,9.07e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-56;42!CL:0000049;1.28e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.83e-59!102;UBERON:0003061!3.83e-59!102;UBERON:0002193!3.12e-54!112;UBERON:0002371!2.42e-47!80;UBERON:0001474!5.27e-43!86;UBERON:0004765!2.01e-34!101;UBERON:0001434!2.01e-34!101;UBERON:0002405!4.32e-34!115;UBERON:0003081!1.92e-19!216;UBERON:0002384!1.32e-18!375;UBERON:0002204!4.41e-16!167;UBERON:0000178!2.97e-11!15;UBERON:0000179!2.97e-11!15;UBERON:0000463!2.97e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.33e-07;15!UBERON:0000179;5.33e-07;15!UBERON:0000463;5.33e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.41e-50,98;UBERON:0003061,9.41e-50,98;UBERON:0002371,6.15e-48,76;UBERON:0002193,1.81e-44,108;UBERON:0001474,5.89e-44,82;UBERON:0004765,1.83e-39,90;UBERON:0002405,5.61e-38,93;UBERON:0001434,7.51e-35,100;UBERON:0003081,4.31e-20,203;UBERON:0002204,4.07e-18,167;UBERON:0002384,1.14e-11,371;UBERON:0000926,3.47e-10,315;UBERON:0004120,3.47e-10,315;UBERON:0006603,3.47e-10,315;UBERON:0000178,5.64e-07,15;UBERON:0000179,5.64e-07,15;UBERON:0000463,5.64e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,1.57345710739562,0.383829398097213,0.928896739896456,0,0,0,0,0,0.293600439334847,3.32397245119126,5.01361118675354,1.30206522429511,0,0,0,1.16318591023652,2.26725566213286,0.970336244751265,0.929716147622738,2.46700732813095,2.78735733805593,1.43846196161075,1.2808035326455,1.6553756092201,2.41321976515633,3.87290810150296,5.41705946377367,1.88242339542605,0.545812300115692,1.12361742222542,0.306083892370903,0.962787081228281,3.19668562899521,0.659702600373432,0.398927315243264,0.852449501065388,1.45104619314292,1.13477044938228,2.4912889959823,0.75374599577023,0.521482918420201,1.73751075764093,2.42159801053347,1.47311054395026,3.79754864929061,0.633765858935825,1.06302149982522,0.838634582033504,1.34794357375794,1.05123824989054,1.12507910687956,0.855038231223746,1.9891667719909,0.730656615058536,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,1.14681968437569,1.32171328579026,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,1.94826728407911,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0,0,0,0,0,0,17.2271615507852,17.9496875522415,18.2342825911856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.72571360654893,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0,0.714695326373367,2.05681136543097,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0.313359791546046,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.5748172408605,5.41661368190565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr11:3860555..3860570,+ | |short_description=p@chr11:3860555..3860570,+ | ||
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Latest revision as of 22:06, 23 July 2015
Short description: | p@chr11:3860555..3860570, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:3860555..3860570, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.41e-50 | 98 |
blood island | 9.41e-50 | 98 |
bone marrow | 6.15e-48 | 76 |
hemolymphoid system | 1.81e-44 | 108 |
bone element | 5.89e-44 | 82 |
skeletal element | 1.83e-39 | 90 |
immune system | 5.61e-38 | 93 |
skeletal system | 7.51e-35 | 100 |
lateral plate mesoderm | 4.31e-20 | 203 |
musculoskeletal system | 4.07e-18 | 167 |
connective tissue | 1.14e-11 | 371 |
mesoderm | 3.47e-10 | 315 |
mesoderm-derived structure | 3.47e-10 | 315 |
presumptive mesoderm | 3.47e-10 | 315 |
blood | 5.64e-07 | 15 |
haemolymphatic fluid | 5.64e-07 | 15 |
organism substance | 5.64e-07 | 15 |