FFCP PHASE1:Hg19::chr16:84808680..84808687,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84808680..84808687,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr16:84808680..84808687,+ | |description=CAGE_peak_at_chr16:84808680..84808687,+ | ||
|id=chr16:84808680..84808687,+ | |id=chr16:84808680..84808687,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.60e-48!42;CL:0000860!1.32e-44!45;CL:0000766!1.08e-37!76;CL:0002194!2.11e-30!63;CL:0000576!2.11e-30!63;CL:0000040!2.11e-30!63;CL:0000559!2.11e-30!63;CL:0002009!3.59e-29!65;CL:0000839!4.12e-28!70;CL:0000557!1.41e-27!71;CL:0000763!4.36e-23!112;CL:0000049!4.36e-23!112;CL:0000738!1.00e-20!140;CL:0002087!6.24e-17!119;CL:0002031!9.38e-16!124;CL:0002032!1.23e-15!165;CL:0000837!1.23e-15!165;CL:0000037!2.04e-15!172;CL:0000566!2.04e-15!172;CL:0000988!6.75e-14!182;CL:0000094!6.17e-11!8;CL:0000775!1.61e-08!3;CL:0000081!1.10e-07!11 | |ontology_enrichment_celltype=CL:0002057!1.60e-48!42;CL:0000860!1.32e-44!45;CL:0000766!1.08e-37!76;CL:0002194!2.11e-30!63;CL:0000576!2.11e-30!63;CL:0000040!2.11e-30!63;CL:0000559!2.11e-30!63;CL:0002009!3.59e-29!65;CL:0000839!4.12e-28!70;CL:0000557!1.41e-27!71;CL:0000763!4.36e-23!112;CL:0000049!4.36e-23!112;CL:0000738!1.00e-20!140;CL:0002087!6.24e-17!119;CL:0002031!9.38e-16!124;CL:0002032!1.23e-15!165;CL:0000837!1.23e-15!165;CL:0000037!2.04e-15!172;CL:0000566!2.04e-15!172;CL:0000988!6.75e-14!182;CL:0000094!6.17e-11!8;CL:0000775!1.61e-08!3;CL:0000081!1.10e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.99e-51;33!CL:0002057;2.99e-51;33!CL:0000473;3.00e-35;39!CL:0000234;3.00e-35;39!CL:0000576;6.07e-23;48!CL:0000094;4.08e-20;8!CL:0000775;4.91e-20;3!CL:0000766;1.63e-17;69!CL:0000081;1.43e-14;11!CL:0000771;4.84e-14;2!CL:0000763;5.77e-11;100!CL:0000738;2.21e-07;136!CL:0002087;9.99e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-42,42;CL:0002057,1.23e-42,42;CL:0000766,1.24e-39,72;CL:0000473,7.60e-37,48;CL:0000234,7.60e-37,48;CL:0002194,9.85e-29,59;CL:0000576,9.85e-29,59;CL:0000040,9.85e-29,59;CL:0000559,9.85e-29,59;CL:0002009,1.10e-27,61;CL:0000839,2.42e-25,66;CL:0000763,5.27e-25,108;CL:0000049,5.27e-25,108;CL:0000557,6.49e-25,67;CL:0000738,7.55e-21,136;CL:0000094,4.01e-20,8;CL:0000775,4.77e-20,3;CL:0002032,7.00e-17,161;CL:0000837,7.00e-17,161;CL:0000037,5.57e-16,168;CL:0000988,6.30e-15,177;CL:0002087,9.39e-15,115;CL:0000081,1.41e-14,11;CL:0000771,4.85e-14,2;CL:0002031,5.54e-14,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.36e-33;42!CL:0000049;2.05e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.12e-35!102;UBERON:0003061!9.12e-35!102;UBERON:0002193!1.77e-30!112;UBERON:0002371!2.25e-23!80;UBERON:0001474!4.56e-21!86;UBERON:0004765!9.60e-18!101;UBERON:0001434!9.60e-18!101;UBERON:0002405!1.92e-16!115;UBERON:0003081!9.51e-13!216;UBERON:0002204!3.42e-12!167;UBERON:0000178!2.10e-11!15;UBERON:0000179!2.10e-11!15;UBERON:0000463!2.10e-11!15;UBERON:0007023!2.05e-08!115 | |||
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|short_description=p@chr16:84808680..84808687,+ | |short_description=p@chr16:84808680..84808687,+ | ||
}} | }} |
Latest revision as of 12:56, 25 July 2015
Short description: | p@chr16:84808680..84808687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84808680..84808687, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-42 | 42 |
myeloid leukocyte | 1.24e-39 | 72 |
defensive cell | 7.60e-37 | 48 |
phagocyte | 7.60e-37 | 48 |
monopoietic cell | 9.85e-29 | 59 |
monocyte | 9.85e-29 | 59 |
monoblast | 9.85e-29 | 59 |
promonocyte | 9.85e-29 | 59 |
macrophage dendritic cell progenitor | 1.10e-27 | 61 |
myeloid lineage restricted progenitor cell | 2.42e-25 | 66 |
myeloid cell | 5.27e-25 | 108 |
common myeloid progenitor | 5.27e-25 | 108 |
granulocyte monocyte progenitor cell | 6.49e-25 | 67 |
leukocyte | 7.55e-21 | 136 |
granulocyte | 4.01e-20 | 8 |
neutrophil | 4.77e-20 | 3 |
hematopoietic oligopotent progenitor cell | 7.00e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.00e-17 | 161 |
hematopoietic stem cell | 5.57e-16 | 168 |
hematopoietic cell | 6.30e-15 | 177 |
nongranular leukocyte | 9.39e-15 | 115 |
blood cell | 1.41e-14 | 11 |
eosinophil | 4.85e-14 | 2 |
hematopoietic lineage restricted progenitor cell | 5.54e-14 | 120 |