FFCP PHASE1:Hg19::chr12:125398498..125398506,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7316 | |EntrezGene=7316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12468 | |HGNC=12468 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-178bp_to_uc001ugu.1_5end | |association_with_transcript=-178bp_to_uc001ugu.1_5end | ||
|cluster_id=chr12:125398498..125398506,- | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_16_at_UBC_5end | |description=CAGE_peak_16_at_UBC_5end | ||
|id=chr12:125398498..125398506,- | |id=chr12:125398498..125398506,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000453;3.73e-23;5!CL:0000990;3.73e-13;8!CL:0000451;7.21e-11;10!CL:0001014;1.59e-07;2!CL:0002097;1.59e-07;2!CL:0001016;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,5.88e-23,5;CL:0000990,4.79e-13,8;CL:0000451,8.83e-11,10;CL:0002097,1.99e-07,2;CL:0001014,2.12e-07,2;CL:0001016,2.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.12e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;9.12e-14;1!DOID:3350;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.58e-14,1;DOID:3350,1.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.66e-10!115;UBERON:0001004!6.33e-07!72 | |ontology_enrichment_uberon=UBERON:0007023!8.66e-10!115;UBERON:0001004!6.33e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.12e-14;1!UBERON:0001785;9.12e-14;1!UBERON:0002464;9.12e-14;1!UBERON:0004904;9.12e-14;1!UBERON:0001021;9.12e-14;1!UBERON:0002370;1.59e-07;2!UBERON:0003127;1.59e-07;2!UBERON:0003714;1.59e-07;2!UBERON:0005162;1.59e-07;2!UBERON:0000122;1.59e-07;2!UBERON:0005058;1.59e-07;2!UBERON:0009113;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.65e-14,1;UBERON:0001785,6.65e-14,1;UBERON:0002464,6.65e-14,1;UBERON:0004904,6.65e-14,1;UBERON:0001021,6.65e-14,1;UBERON:0003902,6.65e-14,1;UBERON:0005425,6.65e-14,1;UBERON:0003714,1.36e-07,2;UBERON:0005162,1.36e-07,2;UBERON:0000122,1.36e-07,2;UBERON:0003127,1.64e-07,2 | |||
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| ||
|short_description=p16@UBC | |short_description=p16@UBC | ||
}} | }} |
Latest revision as of 04:44, 17 September 2015
Short description: | p16@UBC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_UBC_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | -178bp_to_uc001ugu.1_5end |
EntrezGene: | UBC |
HGNC: | 12468 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 5.88e-23 | 5 |
conventional dendritic cell | 4.79e-13 | 8 |
dendritic cell | 8.83e-11 | 10 |
cortical cell of adrenal gland | 1.99e-07 | 2 |
CD1a-positive Langerhans cell | 2.12e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.65e-14 | 1 |
cranial nerve | 6.65e-14 | 1 |
nerve trunk | 6.65e-14 | 1 |
nerve connecting eye with brain | 6.65e-14 | 1 |
nerve | 6.65e-14 | 1 |
retinal neural layer | 6.65e-14 | 1 |
presumptive neural retina | 6.65e-14 | 1 |
neural tissue | 1.36e-07 | 2 |
multi cell component structure | 1.36e-07 | 2 |
neuron projection bundle | 1.36e-07 | 2 |
open tracheal system trachea | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.58e-14 | 1 |
mesenchymal cell neoplasm | 1.54e-07 | 2 |