FFCP PHASE1:Hg19::chr11:110001723..110001732,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:110001723..110001732,+
|short_description=p10@ZC3H12C
|description=CAGE_peak_10_at_ZC3H12C_5end
|association_with_transcript=0bp_to_ENST00000528673,uc010r...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85463 | |EntrezGene=85463 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29362 | |HGNC=29362 | ||
|TSSclassifier=strong | |||
|UniProt=B4DR47 | |UniProt=B4DR47 | ||
|association_with_transcript=0bp_to_ENST00000528673,uc010rwd.1_5end | |||
|cluster_id=chr11:110001723..110001732,+ | |||
|description=CAGE_peak_10_at_ZC3H12C_5end | |||
|id=chr11:110001723..110001732,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.39e-10!8;CL:0000221!6.60e-10!71;CL:0000133!2.43e-09!59;CL:0002319!5.96e-08!25;CL:0000540!2.90e-07!6;CL:0000031!2.90e-07!6;CL:0000404!2.90e-07!6;CL:0000240!4.74e-07!6;CL:0000311!4.74e-07!6;CL:0000079!4.74e-07!6;CL:0000237!4.74e-07!6;CL:0000036!4.74e-07!6;CL:0000357!4.74e-07!6;CL:0000114!4.74e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.54e-16;25!CL:0002605;1.13e-14;3!CL:0000123;3.94e-11;2!CL:0000242;3.94e-11;2!CL:0000047;3.51e-10;2!CL:0000312;3.06e-09;5!CL:0000540;6.44e-08;6!CL:0000404;6.44e-08;6!CL:0000240;9.10e-08;6!CL:0000311;9.10e-08;6!CL:0000079;9.10e-08;6!CL:0000237;9.10e-08;6!CL:0002144;5.60e-07;3!CL:0000064;9.62e-07;3!CL:0000067;9.62e-07;3!CL:0005012;9.62e-07;3!CL:0002304;9.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.19e-16,25;CL:0000047,7.59e-15,8;CL:0002605,1.16e-14,3;CL:0000133,5.28e-14,59;CL:0000221,1.45e-12,72;CL:0000242,3.94e-11,2;CL:0000312,3.19e-09,5;CL:0000540,6.52e-08,6;CL:0000031,6.52e-08,6;CL:0000404,6.52e-08,6;CL:0000240,9.43e-08,6;CL:0000311,9.43e-08,6;CL:0000079,9.43e-08,6;CL:0000237,9.43e-08,6;CL:0000036,9.43e-08,6;CL:0000357,9.43e-08,6;CL:0000114,9.43e-08,6;CL:0002144,5.12e-07,3;CL:0000064,7.58e-07,3;CL:0000067,7.58e-07,3;CL:0005012,7.58e-07,3;CL:0002304,7.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000133;1.06e-08;59!CL:0000031;6.44e-08;6!CL:0000357;9.10e-08;6!CL:0000114;9.10e-08;6!CL:0000221;3.69e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.83e-14!94;UBERON:0001016!1.83e-14!94;UBERON:0001017!7.54e-14!82;UBERON:0005743!9.56e-13!86;UBERON:0000924!2.13e-11!173;UBERON:0006601!2.13e-11!173;UBERON:0002780!2.79e-11!41;UBERON:0001890!2.79e-11!41;UBERON:0006240!2.79e-11!41;UBERON:0004121!2.91e-11!169;UBERON:0003080!7.08e-11!42;UBERON:0001049!8.61e-11!57;UBERON:0005068!8.61e-11!57;UBERON:0006241!8.61e-11!57;UBERON:0007135!8.61e-11!57;UBERON:0003056!2.25e-10!61;UBERON:0002346!3.05e-09!90;UBERON:0002616!3.28e-09!59;UBERON:0003075!3.47e-09!86;UBERON:0007284!3.47e-09!86;UBERON:0001894!2.18e-08!7;UBERON:0006222!2.18e-08!7;UBERON:0000955!2.34e-08!69;UBERON:0006238!2.34e-08!69;UBERON:0003296!1.60e-07!4;UBERON:0010133!1.60e-07!4;UBERON:0002020!1.87e-07!34;UBERON:0003528!1.87e-07!34;UBERON:0000922!3.07e-07!612;UBERON:0002118!3.49e-07!5;UBERON:0004532!3.49e-07!5;UBERON:0001869!3.74e-07!32;UBERON:0002791!7.84e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.72e-11;4!UBERON:0010133;1.72e-11;4!UBERON:0000007;8.14e-11;2!UBERON:0002108;7.76e-09;4!UBERON:0000956;8.16e-08;25!UBERON:0000203;8.16e-08;25!UBERON:0002780;8.30e-08;41!UBERON:0001890;8.30e-08;41!UBERON:0010523;5.60e-07;3!UBERON:0001915;5.60e-07;3!UBERON:0002114;5.60e-07;2!UBERON:0001982;5.60e-07;3!UBERON:0000922;7.69e-07;49!UBERON:0001778;9.62e-07;3!UBERON:0001775;9.62e-07;3!UBERON:0001894;9.78e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.40e-12,89;UBERON:0003296,1.76e-11,4;UBERON:0010133,1.76e-11,4;UBERON:0004121,5.25e-11,171;UBERON:0000924,5.25e-11,171;UBERON:0006601,5.25e-11,171;UBERON:0000007,7.77e-11,2;UBERON:0001017,8.42e-11,81;UBERON:0003056,7.28e-10,61;UBERON:0002780,3.14e-09,41;UBERON:0001890,3.14e-09,41;UBERON:0003080,3.14e-09,41;UBERON:0006240,3.14e-09,41;UBERON:0002108,9.26e-09,4;UBERON:0000956,8.59e-08,25;UBERON:0000203,8.59e-08,25;UBERON:0010371,8.95e-08,104;UBERON:0002346,2.21e-07,86;UBERON:0010523,5.12e-07,3;UBERON:0001915,5.12e-07,3;UBERON:0001982,5.12e-07,3;UBERON:0002114,6.72e-07,2;UBERON:0001778,7.58e-07,3;UBERON:0001775,7.58e-07,3;UBERON:0000073,8.94e-07,53;UBERON:0002616,8.94e-07,53;UBERON:0001894,9.89e-07,7;UBERON:0006222,9.89e-07,7 | |||
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| ||
|short_description=p10@ZC3H12C | |||
}} | }} |
Latest revision as of 01:25, 25 September 2015
Short description: | p10@ZC3H12C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ZC3H12C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528673, uc010rwd.1_5end |
EntrezGene: | ZC3H12C |
HGNC: | 29362 |
UniProt: | B4DR47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.19e-16 | 25 |
neuronal stem cell | 7.59e-15 | 8 |
astrocyte of the cerebral cortex | 1.16e-14 | 3 |
neurectodermal cell | 5.28e-14 | 59 |
ectodermal cell | 1.45e-12 | 72 |
Merkel cell | 3.94e-11 | 2 |
keratinocyte | 3.19e-09 | 5 |
neuron | 6.52e-08 | 6 |
neuroblast | 6.52e-08 | 6 |
electrically signaling cell | 6.52e-08 | 6 |
stratified squamous epithelial cell | 9.43e-08 | 6 |
keratin accumulating cell | 9.43e-08 | 6 |
stratified epithelial cell | 9.43e-08 | 6 |
keratinizing barrier epithelial cell | 9.43e-08 | 6 |
epithelial fate stem cell | 9.43e-08 | 6 |
stratified epithelial stem cell | 9.43e-08 | 6 |
surface ectodermal cell | 9.43e-08 | 6 |
capillary endothelial cell | 5.12e-07 | 3 |
ciliated cell | 7.58e-07 | 3 |
ciliated epithelial cell | 7.58e-07 | 3 |
multi-ciliated epithelial cell | 7.58e-07 | 3 |
non-pigmented ciliary epithelial cell | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.40e-12 | 89 |
gland of diencephalon | 1.76e-11 | 4 |
neuroendocrine gland | 1.76e-11 | 4 |
ectoderm-derived structure | 5.25e-11 | 171 |
ectoderm | 5.25e-11 | 171 |
presumptive ectoderm | 5.25e-11 | 171 |
pituitary gland | 7.77e-11 | 2 |
central nervous system | 8.42e-11 | 81 |
pre-chordal neural plate | 7.28e-10 | 61 |
regional part of forebrain | 3.14e-09 | 41 |
forebrain | 3.14e-09 | 41 |
anterior neural tube | 3.14e-09 | 41 |
future forebrain | 3.14e-09 | 41 |
small intestine | 9.26e-09 | 4 |
cerebral cortex | 8.59e-08 | 25 |
pallium | 8.59e-08 | 25 |
ecto-epithelium | 8.95e-08 | 104 |
neurectoderm | 2.21e-07 | 86 |
microcirculatory vessel | 5.12e-07 | 3 |
endothelium of capillary | 5.12e-07 | 3 |
capillary | 5.12e-07 | 3 |
duodenum | 6.72e-07 | 2 |
ciliary epithelium | 7.58e-07 | 3 |
ciliary body | 7.58e-07 | 3 |
regional part of nervous system | 8.94e-07 | 53 |
regional part of brain | 8.94e-07 | 53 |
diencephalon | 9.89e-07 | 7 |
future diencephalon | 9.89e-07 | 7 |