FFCP PHASE1:Hg19::chr11:1593957..1593976,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:1593957..1593976,+
|short_description=p2@LOC338651
|description=CAGE_peak_2_at_LOC338651_5end
|association_with_transcript=0bp_to_ENST00000424148,NR_02148...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338651 | |EntrezGene=338651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q96NM2 | |UniProt=Q96NM2 | ||
|association_with_transcript=0bp_to_ENST00000424148,NR_021489,uc009ycx.1_5end | |||
|cluster_id=chr11:1593957..1593976,+ | |||
|description=CAGE_peak_2_at_LOC338651_5end | |||
|id=chr11:1593957..1593976,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.07e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.16e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.99e-27;3!UBERON:0006298;6.32e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.32e-10;1!DOID:1357;6.32e-10;1!DOID:4362;8.61e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.24e-10,1;DOID:1357,8.24e-10,1;DOID:4362,1.25e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.29e-19!115;UBERON:0001049!7.95e-11!57;UBERON:0005068!7.95e-11!57;UBERON:0006241!7.95e-11!57;UBERON:0007135!7.95e-11!57;UBERON:0001950!5.09e-10!20;UBERON:0002780!1.78e-09!41;UBERON:0001890!1.78e-09!41;UBERON:0006240!1.78e-09!41;UBERON:0002616!2.22e-09!59;UBERON:0003080!4.30e-09!42;UBERON:0005743!5.78e-09!86;UBERON:0002619!9.42e-09!22;UBERON:0003075!2.03e-08!86;UBERON:0007284!2.03e-08!86;UBERON:0000073!3.04e-08!94;UBERON:0001016!3.04e-08!94;UBERON:0002346!3.60e-08!90;UBERON:0001017!6.92e-08!82;UBERON:0001869!1.56e-07!32;UBERON:0000955!1.99e-07!69;UBERON:0006238!1.99e-07!69;UBERON:0000956!3.07e-07!25;UBERON:0000203!3.07e-07!25;UBERON:0001893!8.18e-07!34;UBERON:0003056!9.63e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.58e-19;2!UBERON:0002757;3.58e-19;2!UBERON:0010134;3.58e-19;2!UBERON:0005408;3.58e-19;2!UBERON:0001899;3.58e-19;2!UBERON:0002037;5.03e-14;6!UBERON:0003296;4.75e-10;4!UBERON:0010133;4.75e-10;4!UBERON:0002784;4.75e-10;4!UBERON:0001736;6.32e-10;1!UBERON:0001764;6.32e-10;1!UBERON:0001825;6.32e-10;1!UBERON:0002680;1.60e-09;9!UBERON:0001895;1.60e-09;9!UBERON:0004733;2.94e-07;12!UBERON:0002028;2.94e-07;12!UBERON:0004732;9.86e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.43e-19,2;UBERON:0002757,3.43e-19,2;UBERON:0010134,3.43e-19,2;UBERON:0005408,3.43e-19,2;UBERON:0001899,3.43e-19,2;UBERON:0002037,5.38e-14,6;UBERON:0006215,5.38e-14,6;UBERON:0001736,4.06e-10,1;UBERON:0006298,4.06e-10,1;UBERON:0003296,4.65e-10,4;UBERON:0010133,4.65e-10,4;UBERON:0002784,4.65e-10,4;UBERON:0001764,8.24e-10,1;UBERON:0001825,8.24e-10,1;UBERON:0002680,1.67e-09,9;UBERON:0001895,1.67e-09,9;UBERON:0010092,1.67e-09,9;UBERON:0000073,2.82e-07,53;UBERON:0002616,2.82e-07,53;UBERON:0001017,2.97e-07,81;UBERON:0004733,3.04e-07,12;UBERON:0002028,3.04e-07,12;UBERON:0007277,3.04e-07,12;UBERON:0000955,5.34e-07,68;UBERON:0006238,5.34e-07,68;UBERON:0001049,7.49e-07,56;UBERON:0005068,7.49e-07,56;UBERON:0006241,7.49e-07,56;UBERON:0007135,7.49e-07,56 | |||
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| ||
|short_description=p2@LOC338651 | |||
}} | }} |
Latest revision as of 22:44, 16 September 2015
Short description: | p2@LOC338651 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC338651_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424148, NR_021489, uc009ycx.1_5end |
EntrezGene: | LOC338651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.16e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.43e-19 | 2 |
regional part of epithalamus | 3.43e-19 | 2 |
secretory circumventricular organ | 3.43e-19 | 2 |
circumventricular organ | 3.43e-19 | 2 |
epithalamus | 3.43e-19 | 2 |
cerebellum | 5.38e-14 | 6 |
rhombic lip | 5.38e-14 | 6 |
submandibular gland | 4.06e-10 | 1 |
submandibular gland primordium | 4.06e-10 | 1 |
gland of diencephalon | 4.65e-10 | 4 |
neuroendocrine gland | 4.65e-10 | 4 |
regional part of diencephalon | 4.65e-10 | 4 |
maxillary sinus | 8.24e-10 | 1 |
paranasal sinus | 8.24e-10 | 1 |
regional part of metencephalon | 1.67e-09 | 9 |
metencephalon | 1.67e-09 | 9 |
future metencephalon | 1.67e-09 | 9 |
regional part of nervous system | 2.82e-07 | 53 |
regional part of brain | 2.82e-07 | 53 |
central nervous system | 2.97e-07 | 81 |
segmental subdivision of hindbrain | 3.04e-07 | 12 |
hindbrain | 3.04e-07 | 12 |
presumptive hindbrain | 3.04e-07 | 12 |
brain | 5.34e-07 | 68 |
future brain | 5.34e-07 | 68 |
neural tube | 7.49e-07 | 56 |
neural rod | 7.49e-07 | 56 |
future spinal cord | 7.49e-07 | 56 |
neural keel | 7.49e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.24e-10 | 1 |
maxillary sinus cancer | 8.24e-10 | 1 |
cervical cancer | 1.25e-07 | 5 |