FFCP PHASE1:Hg19::chr19:54876689..54876707,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3903 | |EntrezGene=3903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6477 | |HGNC=6477 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463489,ENST00000468656_5end | |association_with_transcript=0bp_to_ENST00000463489,ENST00000468656_5end | ||
|cluster_id=chr19:54876689..54876707,- | |||
|coexpression_cluster_id=C3822 | |||
|description=CAGE_peak_6_at_LAIR1_5end | |description=CAGE_peak_6_at_LAIR1_5end | ||
|id=chr19:54876689..54876707,- | |id=chr19:54876689..54876707,- | ||
|ontology_enrichment_celltype=CL:0000763!2.82e-62!112;CL:0000049!2.82e-62!112;CL:0000839!1.56e-54!70;CL:0000766!5.87e-54!76;CL:0000557!1.58e-51!71;CL:0002194!4.99e-48!63;CL:0000576!4.99e-48!63;CL:0000040!4.99e-48!63;CL:0000559!4.99e-48!63;CL:0002009!6.67e-46!65;CL:0002057!3.59e-45!42;CL:0000037!1.91e-42!172;CL:0000566!1.91e-42!172;CL:0000860!5.21e-41!45;CL:0002032!2.13e-39!165;CL:0000837!2.13e-39!165;CL:0000988!2.89e-38!182;CL:0000738!1.46e-28!140;CL:0002031!1.63e-26!124;CL:0002087!6.17e-25!119;CL:0000134!5.04e-11!358;CL:0002320!2.94e-10!365;CL:0002393!1.93e-08!9;CL:0002397!1.93e-08!9;CL:0000219!1.15e-07!390 | |ontology_enrichment_celltype=CL:0000763!2.82e-62!112;CL:0000049!2.82e-62!112;CL:0000839!1.56e-54!70;CL:0000766!5.87e-54!76;CL:0000557!1.58e-51!71;CL:0002194!4.99e-48!63;CL:0000576!4.99e-48!63;CL:0000040!4.99e-48!63;CL:0000559!4.99e-48!63;CL:0002009!6.67e-46!65;CL:0002057!3.59e-45!42;CL:0000037!1.91e-42!172;CL:0000566!1.91e-42!172;CL:0000860!5.21e-41!45;CL:0002032!2.13e-39!165;CL:0000837!2.13e-39!165;CL:0000988!2.89e-38!182;CL:0000738!1.46e-28!140;CL:0002031!1.63e-26!124;CL:0002087!6.17e-25!119;CL:0000134!5.04e-11!358;CL:0002320!2.94e-10!365;CL:0002393!1.93e-08!9;CL:0002397!1.93e-08!9;CL:0000219!1.15e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.36e-64;33!CL:0002057;6.36e-64;33!CL:0000473;3.70e-63;39!CL:0000234;3.70e-63;39!CL:0000576;2.66e-50;48!CL:0000766;1.97e-38;69!CL:0000763;9.32e-35;100!CL:0000235;3.27e-13;6!CL:0002087;3.77e-11;104!CL:0000988;3.40e-10;177!CL:0000738;4.73e-10;136!CL:0002619;2.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.01e-101,108;CL:0000049,3.01e-101,108;CL:0000839,4.19e-87,66;CL:0000766,9.50e-85,72;CL:0000557,1.38e-82,67;CL:0002194,2.59e-81,59;CL:0000576,2.59e-81,59;CL:0000040,2.59e-81,59;CL:0000559,2.59e-81,59;CL:0000473,8.07e-79,48;CL:0000234,8.07e-79,48;CL:0002009,3.26e-78,61;CL:0000860,1.14e-66,42;CL:0002057,1.14e-66,42;CL:0000037,3.31e-66,168;CL:0000988,7.24e-62,177;CL:0002032,7.65e-62,161;CL:0000837,7.65e-62,161;CL:0000738,1.37e-42,136;CL:0002031,2.94e-41,120;CL:0002087,1.96e-38,115;CL:0000134,2.00e-26,354;CL:0002320,1.60e-25,361;CL:0000219,2.37e-22,386;CL:0000034,1.20e-19,441;CL:0000048,1.78e-18,427;CL:0000723,6.07e-18,433;CL:0000235,3.28e-13,6;CL:0002619,2.55e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.71e-49;42!CL:0000049;1.06e-27;108 | |||
|ontology_enrichment_disease=DOID:8692!4.94e-13!31;DOID:1240!7.93e-12!39;DOID:2531!8.11e-09!51;DOID:0060083!8.11e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.57e-20;31!DOID:1240;5.26e-13;39!DOID:2531;3.65e-07;51!DOID:0060083;3.65e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.24e-21,31;DOID:1240,4.23e-16,39;DOID:2531,4.09e-11,51;DOID:0060083,4.09e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!9.45e-47!80;UBERON:0002390!1.44e-46!102;UBERON:0003061!1.44e-46!102;UBERON:0001474!3.31e-43!86;UBERON:0002193!1.79e-42!112;UBERON:0002405!4.71e-37!115;UBERON:0004765!2.12e-34!101;UBERON:0001434!2.12e-34!101;UBERON:0007023!4.23e-18!115;UBERON:0003081!1.37e-13!216;UBERON:0002204!2.21e-13!167;UBERON:0002384!1.06e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.13e-74,76;UBERON:0001474,1.00e-67,82;UBERON:0002390,5.51e-61,98;UBERON:0003061,5.51e-61,98;UBERON:0004765,2.18e-60,90;UBERON:0002405,3.27e-60,93;UBERON:0002193,6.69e-54,108;UBERON:0001434,7.36e-53,100;UBERON:0002204,1.11e-25,167;UBERON:0002384,2.90e-25,371;UBERON:0003081,1.88e-21,203;UBERON:0000926,2.76e-09,315;UBERON:0004120,2.76e-09,315;UBERON:0006603,2.76e-09,315 | |||
|phase1_expression=0,1.2846031433459,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.53531759238885,2.16742572642506,0,0,0,0,0,5.5784083473621,3.32397245119126,4.8130667392834,1.08505435357926,3.80656306207871,3.56283032620878,3.60605794687861,2.32637182047304,5.29026321164333,5.33684934613196,9.0647324393217,11.1015329765893,7.74265927237759,3.16461631554365,4.09857130446561,4.7296445977717,8.96338769915208,5.80936215225443,8.12558919566051,6.40023954444856,7.09555990150399,6.06753408001728,14.9981107261742,14.1208771913481,8.31138263538754,1.31940520074686,3.19141852194611,3.40979800426155,19.4440189881151,10.2129340444405,6.85104473895132,4.01997864410789,6.77927793946262,5.2125322729228,13.3187890579341,7.36555271975129,6.64571013625857,0.422510572623884,0.425208599930087,1.46761051855863,2.13424399178341,1.05123824989054,2.4108838004562,0.855038231223746,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,6.05783394982677,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66299114001014,5.38209809820247,3.86441021950693,0,0,0,0,0,0,0.492663237895943,0.880484340132261,1.24396869324463,1.44119953416961,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,2.00902836572851,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.50999940573032,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97333888981341,1.8300481571743,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0,0,0.185803175125719,0.144269212976445,0,0.956557636372934,1.1974762285969,8.23473091569177,0.423347165447766,19.8019383567479,4.7735520279288,2.73881614839831,4.0736772900986,7.51903431270201,1.01575066680962,7.22646337966648,4.64139326539409,2.98092366383228,2.74804275804612,11.0606675151045,9.17072042358905,10.3446467861383,1.36771666781428,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0.296964680832639,0,1.9882952955326,0.703347082052564,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,10.2314474045374,0.394573622547734,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.230850775511391,0.227884111694002,0,0,0,0,0,0,0,1.8837630767403,0.498635045700469,0,0,0,0,1.27149263184303,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,6.38732940334862,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0.335917362433631,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.209818352539992,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.26446520348538,0,0,0.961086713109252,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,19.5846409213011,14.2893239592939,17.4616978755173,7.86894313703531,0,0,0,0.250381861413,0,0.887432412294818,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,1.06691729694141,0.688859918643263,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0.157723490002507,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0.620060389503552,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0.606965604236632,0,0.443511850813194,0,0,0.203909198930495,0,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.469919589899268,1.03132620757723,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.20686599172379,0.426467963801962,0.23806443146374,0.193766729508018,0.434523000071005,0,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0.162806537221949,0,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p6@LAIR1 | |short_description=p6@LAIR1 | ||
}} | }} |
Latest revision as of 22:11, 19 September 2015
Short description: | p6@LAIR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LAIR1_5end |
Coexpression cluster: | C3822_CD14_Macrophage_mature_acute_Monocytederived_biphenotypic_granulocyte |
Association with transcript: | 0bp_to_ENST00000463489, ENST00000468656_5end |
EntrezGene: | LAIR1 |
HGNC: | 6477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.01e-101 | 108 |
common myeloid progenitor | 3.01e-101 | 108 |
myeloid lineage restricted progenitor cell | 4.19e-87 | 66 |
myeloid leukocyte | 9.50e-85 | 72 |
granulocyte monocyte progenitor cell | 1.38e-82 | 67 |
monopoietic cell | 2.59e-81 | 59 |
monocyte | 2.59e-81 | 59 |
monoblast | 2.59e-81 | 59 |
promonocyte | 2.59e-81 | 59 |
defensive cell | 8.07e-79 | 48 |
phagocyte | 8.07e-79 | 48 |
macrophage dendritic cell progenitor | 3.26e-78 | 61 |
classical monocyte | 1.14e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-66 | 42 |
hematopoietic stem cell | 3.31e-66 | 168 |
hematopoietic cell | 7.24e-62 | 177 |
hematopoietic oligopotent progenitor cell | 7.65e-62 | 161 |
hematopoietic multipotent progenitor cell | 7.65e-62 | 161 |
leukocyte | 1.37e-42 | 136 |
hematopoietic lineage restricted progenitor cell | 2.94e-41 | 120 |
nongranular leukocyte | 1.96e-38 | 115 |
mesenchymal cell | 2.00e-26 | 354 |
connective tissue cell | 1.60e-25 | 361 |
motile cell | 2.37e-22 | 386 |
stem cell | 1.20e-19 | 441 |
multi fate stem cell | 1.78e-18 | 427 |
somatic stem cell | 6.07e-18 | 433 |
macrophage | 3.28e-13 | 6 |
adult endothelial progenitor cell | 2.55e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.13e-74 | 76 |
bone element | 1.00e-67 | 82 |
hematopoietic system | 5.51e-61 | 98 |
blood island | 5.51e-61 | 98 |
skeletal element | 2.18e-60 | 90 |
immune system | 3.27e-60 | 93 |
hemolymphoid system | 6.69e-54 | 108 |
skeletal system | 7.36e-53 | 100 |
musculoskeletal system | 1.11e-25 | 167 |
connective tissue | 2.90e-25 | 371 |
lateral plate mesoderm | 1.88e-21 | 203 |
mesoderm | 2.76e-09 | 315 |
mesoderm-derived structure | 2.76e-09 | 315 |
presumptive mesoderm | 2.76e-09 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.24e-21 | 31 |
leukemia | 4.23e-16 | 39 |
hematologic cancer | 4.09e-11 | 51 |
immune system cancer | 4.09e-11 | 51 |