FFCP PHASE1:Hg19::chr11:35639899..35639959,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:35639899..35639959,+
|short_description=p2@FJX1
|description=CAGE_peak_2_at_FJX1_5end
|association_with_transcript=164bp_to_ENST00000317811,NM_014344,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24147 | |EntrezGene=24147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17166 | |HGNC=17166 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VR8 | |UniProt=Q86VR8 | ||
|association_with_transcript=164bp_to_ENST00000317811,NM_014344,uc001mwh.2_5end | |||
|cluster_id=chr11:35639899..35639959,+ | |||
|description=CAGE_peak_2_at_FJX1_5end | |||
|id=chr11:35639899..35639959,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.73e-35!248;CL:0000220!4.22e-35!246;CL:0000055!2.70e-27!180;CL:0000066!4.38e-25!254;CL:0000222!4.86e-20!119;CL:0000548!2.08e-19!679;CL:0000004!2.08e-19!679;CL:0000255!2.08e-19!679;CL:0000012!2.68e-18!682;CL:0000183!7.29e-13!59;CL:0000057!7.88e-13!75;CL:0000393!4.28e-12!60;CL:0000211!4.28e-12!60;CL:0000680!1.33e-11!57;CL:0000056!1.33e-11!57;CL:0000355!1.33e-11!57;CL:0000144!1.57e-11!625;CL:0000076!4.39e-11!62;CL:0000187!4.56e-11!54;CL:0000221!1.04e-10!71;CL:0002371!4.53e-10!591;CL:0000003!1.14e-08!722;CL:0000213!1.50e-08!57;CL:0000215!1.50e-08!57;CL:0002078!3.11e-08!44;CL:0000192!3.88e-08!42;CL:0000514!3.88e-08!42;CL:1000449!7.60e-08!16;CL:1000497!1.01e-07!18;CL:0002518!1.01e-07!18;CL:0000115!1.45e-07!35;CL:0000133!3.81e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.49e-08;15!CL:1000497;3.41e-08;17!CL:0002518;3.41e-08;17!CL:0000115;3.40e-07;36!CL:0002681;9.13e-07;12!CL:0002584;9.13e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.04e-36,250;CL:0000066,1.54e-24,253;CL:0000222,2.87e-21,121;CL:0000057,2.07e-12,76;CL:0000393,2.18e-12,61;CL:0000211,2.18e-12,61;CL:0000680,7.03e-12,58;CL:0000056,7.03e-12,58;CL:0000355,7.03e-12,58;CL:0000076,2.33e-11,63;CL:0000187,2.52e-11,55;CL:0000221,7.10e-11,72;CL:0000213,2.42e-09,58;CL:0000215,2.42e-09,58;CL:0002078,5.88e-09,45;CL:0000192,2.60e-08,43;CL:0000514,2.60e-08,43;CL:1000449,2.75e-08,15;CL:0000115,2.77e-08,36;CL:1000497,4.08e-08,17;CL:0002518,4.08e-08,17;CL:0000133,3.05e-07,59;CL:0002681,9.29e-07,12;CL:0002584,9.29e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;8.83e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.26e-23!312;UBERON:0000483!3.94e-22!309;UBERON:0000475!2.39e-19!365;UBERON:0000481!1.42e-15!347;UBERON:0000486!5.85e-15!82;UBERON:0002100!1.53e-14!216;UBERON:0005256!9.50e-14!143;UBERON:0000914!4.56e-13!83;UBERON:0002329!4.56e-13!83;UBERON:0003077!4.56e-13!83;UBERON:0003059!4.56e-13!83;UBERON:0007282!4.56e-13!83;UBERON:0009618!4.56e-13!83;UBERON:0007285!4.56e-13!83;UBERON:0003914!1.11e-12!118;UBERON:0000477!2.67e-12!286;UBERON:0002049!3.13e-12!79;UBERON:0007798!3.13e-12!79;UBERON:0000468!3.70e-12!659;UBERON:0003104!4.69e-12!238;UBERON:0009142!4.69e-12!238;UBERON:0000467!1.37e-11!625;UBERON:0003102!1.73e-11!95;UBERON:0004290!1.90e-11!70;UBERON:0000480!1.93e-11!626;UBERON:0000490!8.73e-11!138;UBERON:0000922!9.21e-11!612;UBERON:0000055!2.58e-10!69;UBERON:0004872!2.76e-10!84;UBERON:0000923!3.90e-10!604;UBERON:0005291!3.90e-10!604;UBERON:0006598!3.90e-10!604;UBERON:0002532!3.90e-10!604;UBERON:0002050!4.27e-10!605;UBERON:0005423!4.27e-10!605;UBERON:0004111!4.89e-10!241;UBERON:0001134!3.76e-09!61;UBERON:0002036!3.76e-09!61;UBERON:0003082!3.76e-09!61;UBERON:0001981!4.50e-09!60;UBERON:0007500!4.50e-09!60;UBERON:0004537!4.50e-09!60;UBERON:0006965!4.50e-09!60;UBERON:0000064!5.97e-09!219;UBERON:0001637!8.39e-09!42;UBERON:0003509!8.39e-09!42;UBERON:0004572!8.39e-09!42;UBERON:0002385!1.89e-08!63;UBERON:0001015!1.89e-08!63;UBERON:0000383!1.89e-08!63;UBERON:0006554!4.63e-08!44;UBERON:0004211!7.60e-08!16;UBERON:0001285!7.60e-08!16;UBERON:0007684!7.60e-08!16;UBERON:0003220!7.60e-08!16;UBERON:0004208!7.60e-08!16;UBERON:0004535!1.11e-07!110;UBERON:0001008!1.16e-07!45;UBERON:0000025!1.21e-07!194;UBERON:0006555!5.01e-07!17;UBERON:0005103!5.01e-07!17;UBERON:0000083!5.01e-07!17;UBERON:0009201!5.01e-07!17;UBERON:0004819!5.01e-07!17;UBERON:0006553!5.01e-07!17;UBERON:0003074!5.01e-07!17;UBERON:0003060!5.01e-07!17;UBERON:0001009!6.86e-07!113;UBERON:0002199!8.80e-07!45;UBERON:0002416!8.80e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.46e-08;74!UBERON:0006555;2.49e-08;15!UBERON:0004819;2.49e-08;15!UBERON:0001285;2.49e-08;15!UBERON:0007684;2.49e-08;15!UBERON:0006554;2.83e-08;30!UBERON:0001008;2.83e-08;30!UBERON:0000353;1.35e-07;15!UBERON:0002113;5.70e-07;24!UBERON:0011143;5.70e-07;24!UBERON:0001637;6.29e-07;42!UBERON:0003509;6.29e-07;42!UBERON:0004572;6.29e-07;42!UBERON:0001225;9.13e-07;12!UBERON:0008987;9.13e-07;12 | |||
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| ||
|short_description=p2@FJX1 | |||
}} | }} |
Latest revision as of 20:56, 17 September 2015
Short description: | p2@FJX1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FJX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 164bp_to_ENST00000317811, NM_014344, uc001mwh.2_5end |
EntrezGene: | FJX1 |
HGNC: | 17166 |
UniProt: | Q86VR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.04e-36 | 250 |
epithelial cell | 1.54e-24 | 253 |
mesodermal cell | 2.87e-21 | 121 |
fibroblast | 2.07e-12 | 76 |
electrically responsive cell | 2.18e-12 | 61 |
electrically active cell | 2.18e-12 | 61 |
muscle precursor cell | 7.03e-12 | 58 |
myoblast | 7.03e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.03e-12 | 58 |
squamous epithelial cell | 2.33e-11 | 63 |
muscle cell | 2.52e-11 | 55 |
ectodermal cell | 7.10e-11 | 72 |
lining cell | 2.42e-09 | 58 |
barrier cell | 2.42e-09 | 58 |
meso-epithelial cell | 5.88e-09 | 45 |
smooth muscle cell | 2.60e-08 | 43 |
smooth muscle myoblast | 2.60e-08 | 43 |
epithelial cell of nephron | 2.75e-08 | 15 |
endothelial cell | 2.77e-08 | 36 |
kidney cell | 4.08e-08 | 17 |
kidney epithelial cell | 4.08e-08 | 17 |
neurectodermal cell | 3.05e-07 | 59 |
kidney cortical cell | 9.29e-07 | 12 |
renal cortical epithelial cell | 9.29e-07 | 12 |