FFCP PHASE1:Hg19::chr1:217263210..217263223,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2104 | |EntrezGene=2104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3474 | |HGNC=3474 | ||
|TSSclassifier=strong | |||
|UniProt=P62508 | |UniProt=P62508 | ||
|association_with_transcript=-14bp_to_NM_001243505_5end | |association_with_transcript=-14bp_to_NM_001243505_5end | ||
|cluster_id=chr1:217263210..217263223,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_18_at_ESRRG_5end | |description=CAGE_peak_18_at_ESRRG_5end | ||
|id=chr1:217263210..217263223,- | |id=chr1:217263210..217263223,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.08e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.79e-59!34;UBERON:0003528!2.79e-59!34;UBERON:0001049!3.51e-55!57;UBERON:0005068!3.51e-55!57;UBERON:0006241!3.51e-55!57;UBERON:0007135!3.51e-55!57;UBERON:0001893!4.63e-55!34;UBERON:0001869!8.36e-55!32;UBERON:0002791!1.72e-52!33;UBERON:0002780!2.23e-51!41;UBERON:0001890!2.23e-51!41;UBERON:0006240!2.23e-51!41;UBERON:0003080!5.63e-50!42;UBERON:0002616!6.64e-47!59;UBERON:0000955!2.08e-43!69;UBERON:0006238!2.08e-43!69;UBERON:0000956!2.36e-42!25;UBERON:0000203!2.36e-42!25;UBERON:0007023!5.16e-42!115;UBERON:0001017!9.07e-42!82;UBERON:0002619!1.28e-39!22;UBERON:0005743!2.36e-39!86;UBERON:0001950!2.85e-39!20;UBERON:0003075!3.22e-37!86;UBERON:0007284!3.22e-37!86;UBERON:0003056!1.57e-36!61;UBERON:0002346!4.24e-35!90;UBERON:0000073!1.18e-34!94;UBERON:0001016!1.18e-34!94;UBERON:0000033!2.88e-32!123;UBERON:0000153!7.29e-32!129;UBERON:0007811!7.29e-32!129;UBERON:0004121!9.95e-24!169;UBERON:0000924!6.66e-23!173;UBERON:0006601!6.66e-23!173;UBERON:0002308!4.46e-18!9;UBERON:0000125!4.46e-18!9;UBERON:0000200!1.04e-16!6;UBERON:0000025!1.48e-15!194;UBERON:0000477!1.88e-15!286;UBERON:0004111!3.51e-15!241;UBERON:0001872!1.99e-14!5;UBERON:0002420!1.82e-13!9;UBERON:0007245!1.82e-13!9;UBERON:0010009!1.82e-13!9;UBERON:0010011!1.82e-13!9;UBERON:0000454!1.82e-13!9;UBERON:0009663!3.03e-13!7;UBERON:0000064!5.09e-13!219;UBERON:0000481!3.26e-12!347;UBERON:0000475!1.09e-11!365;UBERON:0001871!1.35e-11!7;UBERON:0000369!2.76e-11!4;UBERON:0002435!2.76e-11!4;UBERON:0000204!2.76e-11!4;UBERON:0010082!2.76e-11!4;UBERON:0000483!2.46e-10!309;UBERON:0000119!4.05e-10!312;UBERON:0002021!9.49e-10!5;UBERON:0000988!1.97e-09!3;UBERON:0005383!4.62e-09!3;UBERON:0005382!4.62e-09!3;UBERON:0000062!5.08e-09!511;UBERON:0002771!7.50e-09!3;UBERON:0006331!1.03e-08!3;UBERON:0002298!2.86e-08!8;UBERON:0003076!8.40e-08!15;UBERON:0003057!8.40e-08!15;UBERON:0001870!6.87e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002902;1.81e-40;1!UBERON:0009899;1.81e-40;1!UBERON:0002021;1.99e-32;5!UBERON:0001950;1.01e-17;20!UBERON:0002619;2.93e-16;22!UBERON:0000988;1.22e-14;3!UBERON:0000956;1.74e-14;25!UBERON:0000203;1.74e-14;25!UBERON:0002791;2.16e-11;32!UBERON:0001893;2.16e-11;34!UBERON:0001869;4.12e-10;32!UBERON:0003528;9.99e-10;34!UBERON:0002020;9.99e-10;34!UBERON:0001872;3.10e-09;5!UBERON:0000955;1.02e-08;68!UBERON:0000073;2.57e-08;53!UBERON:0002616;2.57e-08;53!UBERON:0002298;5.54e-08;6!UBERON:0002780;8.30e-08;41!UBERON:0001890;8.30e-08;41!UBERON:0001016;2.03e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002902,2.21e-40,1;UBERON:0009899,2.21e-40,1;UBERON:0002021,1.99e-32,5;UBERON:0001950,1.10e-17,20;UBERON:0002619,3.17e-16,22;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0000988,1.22e-14,3;UBERON:0000956,1.86e-14,25;UBERON:0000203,1.86e-14,25;UBERON:0001017,1.45e-12,81;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0002791,1.43e-11,32;UBERON:0001869,1.43e-11,32;UBERON:0001016,2.13e-11,89;UBERON:0003528,5.87e-11,34;UBERON:0002020,5.87e-11,34;UBERON:0001893,5.87e-11,34;UBERON:0002780,2.90e-09,41;UBERON:0001890,2.90e-09,41;UBERON:0003080,2.90e-09,41;UBERON:0006240,2.90e-09,41;UBERON:0001872,3.49e-09,5;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0002298,5.54e-08,6;UBERON:0002346,6.09e-08,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,1.99613798001194,0,0.174919999992391,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.399358000997982,0.858452096273142,0,0.940568614814168,0,0,0,0,0,0.0984274815147488,0,0,0.544813624446302,0,0,0,0,0,0.546746009922222,0,0.236417121897595,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.610131324509816,0.500763722825999,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,1.41696576325585,0.478901577171454,0.82046545696302,0,1.10651603942749,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.810451015420736,0.781078098613847,0.620060389503552,1.07806877329642,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,3.46645638181842,0.657727735628491,0,0.222462803784138,0.078493092850514,0.628462359664008,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.301925687133347,0.154348316215889,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.747906392100062,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0.12729431655633,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,1.99613798001194,0,0.174919999992391,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.399358000997982,0.858452096273142,0,0.940568614814168,0,0,0,0,0,0.0984274815147488,0,0,0.544813624446302,0,0,0,0,0,0.546746009922222,0,0.236417121897595,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.610131324509816,0.500763722825999,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.256916900385838,1.41696576325585,0.478901577171454,0.82046545696302,0,1.10651603942749,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.810451015420736,0.781078098613847,0.620060389503552,1.07806877329642,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,3.46645638181842,0.657727735628491,0,0.222462803784138,0.078493092850514,0.628462359664008,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.301925687133347,0.154348316215889,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0.747906392100062,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0.12729431655633,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p18@ESRRG | |short_description=p18@ESRRG | ||
}} | }} |
Latest revision as of 03:58, 25 September 2015
Short description: | p18@ESRRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_ESRRG_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -14bp_to_NM_001243505_5end |
EntrezGene: | ESRRG |
HGNC: | 3474 |
UniProt: | P62508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital pole | 2.21e-40 | 1 |
pole of cerebral hemisphere | 2.21e-40 | 1 |
occipital lobe | 1.99e-32 | 5 |
neocortex | 1.10e-17 | 20 |
regional part of cerebral cortex | 3.17e-16 | 22 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
pons | 1.22e-14 | 3 |
cerebral cortex | 1.86e-14 | 25 |
pallium | 1.86e-14 | 25 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
regional part of telencephalon | 1.43e-11 | 32 |
cerebral hemisphere | 1.43e-11 | 32 |
nervous system | 2.13e-11 | 89 |
brain grey matter | 5.87e-11 | 34 |
gray matter | 5.87e-11 | 34 |
telencephalon | 5.87e-11 | 34 |
regional part of forebrain | 2.90e-09 | 41 |
forebrain | 2.90e-09 | 41 |
anterior neural tube | 2.90e-09 | 41 |
future forebrain | 2.90e-09 | 41 |
parietal lobe | 3.49e-09 | 5 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
brainstem | 5.54e-08 | 6 |
neurectoderm | 6.09e-08 | 86 |