FFCP PHASE1:Hg19::chr11:63273547..63273624,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:63273547..63273624,+
|short_description=p1@LGALS12
|description=CAGE_peak_1_at_LGALS12_5end
|association_with_transcript=0bp_to_ENST00000255684,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85329 | |EntrezGene=85329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15788 | |HGNC=15788 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DT0 | |UniProt=Q96DT0 | ||
|association_with_transcript=0bp_to_ENST00000255684,ENST00000394618_5end | |||
|cluster_id=chr11:63273547..63273624,+ | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_1_at_LGALS12_5end | |||
|id=chr11:63273547..63273624,+ | |||
|ontology_enrichment_celltype=CL:0000763!5.36e-35!112;CL:0000049!5.36e-35!112;CL:0000766!5.67e-23!76;CL:0002057!6.78e-23!42;CL:0000037!2.40e-20!172;CL:0000566!2.40e-20!172;CL:0000860!2.57e-20!45;CL:0002032!1.74e-19!165;CL:0000837!1.74e-19!165;CL:0000988!1.75e-18!182;CL:0000839!1.83e-18!70;CL:0002194!2.83e-17!63;CL:0000576!2.83e-17!63;CL:0000040!2.83e-17!63;CL:0000559!2.83e-17!63;CL:0000557!6.24e-17!71;CL:0002009!3.13e-16!65;CL:0000738!2.11e-09!140;CL:0000136!2.77e-09!15;CL:0000094!5.75e-08!8;CL:0002087!1.99e-07!119;CL:0002031!3.27e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-24;33!CL:0002057;2.03e-24;33!CL:0000473;1.62e-20;39!CL:0000234;1.62e-20;39!CL:0000576;1.75e-17;48!CL:0000763;1.97e-17;100!CL:0000136;1.71e-16;13!CL:0000766;8.61e-15;69!CL:0000094;5.43e-11;8!CL:0000081;1.86e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.15e-50,108;CL:0000049,5.15e-50,108;CL:0000766,2.85e-30,72;CL:0000860,7.23e-28,42;CL:0002057,7.23e-28,42;CL:0000037,1.70e-27,168;CL:0000473,1.84e-27,48;CL:0000234,1.84e-27,48;CL:0002032,1.50e-26,161;CL:0000837,1.50e-26,161;CL:0000988,7.02e-25,177;CL:0002194,8.18e-24,59;CL:0000576,8.18e-24,59;CL:0000040,8.18e-24,59;CL:0000559,8.18e-24,59;CL:0000839,9.42e-24,66;CL:0002009,1.27e-22,61;CL:0000557,6.32e-22,67;CL:0000136,9.14e-14,15;CL:0000738,7.71e-12,136;CL:0000094,5.43e-11,8;CL:0000134,7.95e-10,354;CL:0002320,1.50e-09,361;CL:0002087,3.75e-09,115;CL:0002031,3.53e-08,120;CL:0000219,3.54e-08,386;CL:0000034,8.26e-08,441;CL:0000081,1.86e-07,11;CL:0000048,2.13e-07,427;CL:0000723,5.76e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.90e-21;42!CL:0000049;6.68e-14;108 | |||
|ontology_enrichment_disease=DOID:8692!4.85e-16!31;DOID:1240!1.94e-11!39;DOID:2531!2.94e-08!51;DOID:0060083!2.94e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.64e-23;31!DOID:1240;1.48e-13;39!DOID:2531;1.42e-07;51!DOID:0060083;1.42e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.23e-24,31;DOID:1240,2.01e-17,39;DOID:2531,2.21e-11,51;DOID:0060083,2.21e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-19!102;UBERON:0003061!1.02e-19!102;UBERON:0002193!2.08e-17!112;UBERON:0002371!2.26e-14!80;UBERON:0001474!3.14e-13!86;UBERON:0002405!1.32e-10!115;UBERON:0007023!6.49e-10!115;UBERON:0004765!2.58e-09!101;UBERON:0001434!2.58e-09!101;UBERON:0003081!1.48e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.45e-10;15!UBERON:0000179;4.45e-10;15!UBERON:0000463;4.45e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.42e-25,98;UBERON:0003061,5.42e-25,98;UBERON:0002193,3.01e-22,108;UBERON:0002371,8.10e-18,76;UBERON:0001474,1.32e-15,82;UBERON:0002405,6.51e-15,93;UBERON:0004765,6.79e-14,90;UBERON:0001434,2.55e-11,100;UBERON:0003081,2.77e-11,203;UBERON:0000178,4.58e-10,15;UBERON:0000179,4.58e-10,15;UBERON:0000463,4.58e-10,15;UBERON:0002384,1.18e-09,371;UBERON:0000926,2.80e-07,315;UBERON:0004120,2.80e-07,315;UBERON:0006603,2.80e-07,315;UBERON:0002204,4.70e-07,167 | |||
|phase1_expression=4.72363786103447,133.384626384083,31.5737865174975,23.01685862122,60.3397477476839,0,405.279805069297,23.3736353167927,170.554215214495,0,0,0,0,0,0.331397375727916,4.70627602516243,0,0,0,0.984968464614303,0.816002764977012,8.14982275843028,0,0,0,0,0,0.0787107813136792,18.0947567350496,5.37361157336098,3.40595471295367,0,0,0,0,0,0.293600439334847,4.43196326825502,4.01088894940283,5.64228263861215,0,0,0,1.74477886535478,1.13362783106643,0.970336244751265,3.0215774797739,2.87817521615278,2.16794459626573,2.58923153089935,2.0492856522328,3.78371567821736,6.20542225325913,5.16387746867061,5.41705946377367,2.63539275359647,1.36453075028923,1.34834090667051,2.44867113896722,1.60464513538047,3.19668562899521,1.9791078011203,2.39356389145958,2.13112375266347,4.35313857942876,1.70215567407342,0,3.76872997885115,1.0429658368404,5.86409880703815,4.23779651843358,3.31449872388808,2.53169909952708,1.90129757680748,0.212604299965044,4.82214884669265,16.0629942539488,2.55300717830561,10.9293398954014,0.285012743741249,0,0.365328307529268,0,1.09227722252426,0,0,0,0,0,0,0,0,0,1.32171328579026,2.24203425192614,3.423993102076,0,0,0,0,0,0,0,0.891283655081389,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,7.31420598941885,28.1694361075527,2.9408389224012,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,9.22462922052443,19.3890132074163,0,0,0,0,0,0,0,0,0,9.02512002659322,0.134710672069688,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,1.2781333715647,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,2.8810180793198,1.47008711385542,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0,1.0404181360211,0,0,0,0,0,0.383382679165211,0.985326475791887,3.43388892651582,0,0.288239906833923,0,0,0,0,10.2643467613623,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0.257207374262142,0,0,1.57275793023962,0.542621605391443,0,0,0.355391948742546,0,0,0,0,1.2162378064119,3.01354254859276,0,0,0,0,0,0,0,0,0.591092280605782,0,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,8.98808428736619,35.899375104483,5.8018171881045,0.24538298343828,1.00034104211935,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,5.16920065307218,5.82428342210265,2.24127871387233,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0.262248829918848,0,0,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0,0,0.447749509444357,1.53481913652154,1.8300481571743,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0,0.616194468458578,1.07452572308291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0.953150969619124,1.02359116524534,1.71175595213568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,27.9096185077693,22.1744790071289,21.6465931126182,20.4879326893699,16.865853196534,16.8603060910106,14.040817368191,23.7937552888281,0,0,0,0,0,0,0.318852545457645,19.7583577718488,18.1930101625748,0,34.7345476093774,0,9.58585651939407,31.3359791546046,0,0,12.847046008296,11.5025833098897,4.68430861459359,93.7769591183238,3.37964840739304,4.47352215784832,4.33807768450962,66.6273405320957,3.34087408674291,1.23087398947712,1.6227340708559,11.3244469119259,15.5085705596634,0,37.5060938936049,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,5.24939439509181,0,0,0,0,0.269605053441981,0,19.4397500686211,1.08507746200627,0,0,0,0,0,0,0,28.2749834419569,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0.23056390438806,0,0,0,0,0,0,21.0353543569333,9.30785418640876,1.80476528493745,3.13700054908383,2.18168063068596,0,18.2777065827435,0,0,0.282706142867882,0,1.99052386215701,10.7918228694074,3.05515072466813,0,0,0,0.067401132980677,3.21031058919516,0,0,0,0,0,1.20990716048664,0,1.0741718536843,0,0,0,0,0,0,0.853828638089378,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,0.90392296312213,0.411125773940253,0,0,0.391102765469606,0,6.19013684744122,0,0,0,0,0,0,0,0,0.627617077873999,0,0,0,0,1.27746588066972,0,0,2.51354161145029,10.5413795045374,0,0.998395002494955,0.858452096273142,1.33902874465124,0.335917362433631,0,0,0,0,0,0,0.677386656526276,0,0,2.41129722697529,0.275078873194468,0,0,0,0,0,0.472834243795189,1.73100140845494,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,4.10462603746695,0,6.34547712512704,0,0,0.129282956361551,0.13223260174269,0,0.704815022316672,0.533937062838473,0,1.65695622138878,5.95399226174341,0.395223263795889,0,0,264.392652437564,123.840807647214,153.172788381731,323.938159141287,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0.150257608997218,0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| ||
|short_description=p1@LGALS12 | |||
}} | }} |
Latest revision as of 22:57, 18 September 2015
Short description: | p1@LGALS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGALS12_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | 0bp_to_ENST00000255684, ENST00000394618_5end |
EntrezGene: | LGALS12 |
HGNC: | 15788 |
UniProt: | Q96DT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.15e-50 | 108 |
common myeloid progenitor | 5.15e-50 | 108 |
myeloid leukocyte | 2.85e-30 | 72 |
classical monocyte | 7.23e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.23e-28 | 42 |
hematopoietic stem cell | 1.70e-27 | 168 |
defensive cell | 1.84e-27 | 48 |
phagocyte | 1.84e-27 | 48 |
hematopoietic oligopotent progenitor cell | 1.50e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-26 | 161 |
hematopoietic cell | 7.02e-25 | 177 |
monopoietic cell | 8.18e-24 | 59 |
monocyte | 8.18e-24 | 59 |
monoblast | 8.18e-24 | 59 |
promonocyte | 8.18e-24 | 59 |
myeloid lineage restricted progenitor cell | 9.42e-24 | 66 |
macrophage dendritic cell progenitor | 1.27e-22 | 61 |
granulocyte monocyte progenitor cell | 6.32e-22 | 67 |
fat cell | 9.14e-14 | 15 |
leukocyte | 7.71e-12 | 136 |
granulocyte | 5.43e-11 | 8 |
mesenchymal cell | 7.95e-10 | 354 |
connective tissue cell | 1.50e-09 | 361 |
nongranular leukocyte | 3.75e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 3.53e-08 | 120 |
motile cell | 3.54e-08 | 386 |
stem cell | 8.26e-08 | 441 |
blood cell | 1.86e-07 | 11 |
multi fate stem cell | 2.13e-07 | 427 |
somatic stem cell | 5.76e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.42e-25 | 98 |
blood island | 5.42e-25 | 98 |
hemolymphoid system | 3.01e-22 | 108 |
bone marrow | 8.10e-18 | 76 |
bone element | 1.32e-15 | 82 |
immune system | 6.51e-15 | 93 |
skeletal element | 6.79e-14 | 90 |
skeletal system | 2.55e-11 | 100 |
lateral plate mesoderm | 2.77e-11 | 203 |
blood | 4.58e-10 | 15 |
haemolymphatic fluid | 4.58e-10 | 15 |
organism substance | 4.58e-10 | 15 |
connective tissue | 1.18e-09 | 371 |
mesoderm | 2.80e-07 | 315 |
mesoderm-derived structure | 2.80e-07 | 315 |
presumptive mesoderm | 2.80e-07 | 315 |
musculoskeletal system | 4.70e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.23e-24 | 31 |
leukemia | 2.01e-17 | 39 |
hematologic cancer | 2.21e-11 | 51 |
immune system cancer | 2.21e-11 | 51 |