FFCP PHASE1:Hg19::chr1:40845250..40845254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:40845250..40845254,+ | |||
|coexpression_cluster_id=C2583 | |||
|description=CAGE_peak_at_chr1:40845250..40845254,+ | |description=CAGE_peak_at_chr1:40845250..40845254,+ | ||
|id=chr1:40845250..40845254,+ | |id=chr1:40845250..40845254,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.09e-47!140;CL:0000037!3.57e-44!172;CL:0000566!3.57e-44!172;CL:0002032!2.51e-42!165;CL:0000837!2.51e-42!165;CL:0000988!2.32e-41!182;CL:0002087!1.56e-40!119;CL:0002031!1.90e-40!124;CL:0000542!4.56e-22!53;CL:0000051!4.56e-22!53;CL:0000838!1.18e-21!52;CL:0000766!3.85e-20!76;CL:0000763!5.59e-20!112;CL:0000049!5.59e-20!112;CL:0002057!9.76e-18!42;CL:0000557!1.86e-17!71;CL:0000839!2.67e-17!70;CL:0002009!2.96e-17!65;CL:0002194!4.10e-16!63;CL:0000576!4.10e-16!63;CL:0000040!4.10e-16!63;CL:0000559!4.10e-16!63;CL:0000860!4.92e-16!45;CL:0000945!1.24e-10!24;CL:0000826!1.24e-10!24;CL:0000084!3.68e-10!25;CL:0000827!3.68e-10!25;CL:0000134!1.15e-09!358;CL:0000791!3.57e-09!18;CL:0000789!3.57e-09!18;CL:0002420!3.57e-09!18;CL:0002419!3.57e-09!18;CL:0000790!3.57e-09!18;CL:0002320!6.43e-09!365;CL:0000236!2.10e-08!14;CL:0002393!1.21e-07!9;CL:0002397!1.21e-07!9;CL:0000219!5.38e-07!390 | |ontology_enrichment_celltype=CL:0000738!2.09e-47!140;CL:0000037!3.57e-44!172;CL:0000566!3.57e-44!172;CL:0002032!2.51e-42!165;CL:0000837!2.51e-42!165;CL:0000988!2.32e-41!182;CL:0002087!1.56e-40!119;CL:0002031!1.90e-40!124;CL:0000542!4.56e-22!53;CL:0000051!4.56e-22!53;CL:0000838!1.18e-21!52;CL:0000766!3.85e-20!76;CL:0000763!5.59e-20!112;CL:0000049!5.59e-20!112;CL:0002057!9.76e-18!42;CL:0000557!1.86e-17!71;CL:0000839!2.67e-17!70;CL:0002009!2.96e-17!65;CL:0002194!4.10e-16!63;CL:0000576!4.10e-16!63;CL:0000040!4.10e-16!63;CL:0000559!4.10e-16!63;CL:0000860!4.92e-16!45;CL:0000945!1.24e-10!24;CL:0000826!1.24e-10!24;CL:0000084!3.68e-10!25;CL:0000827!3.68e-10!25;CL:0000134!1.15e-09!358;CL:0000791!3.57e-09!18;CL:0000789!3.57e-09!18;CL:0002420!3.57e-09!18;CL:0002419!3.57e-09!18;CL:0000790!3.57e-09!18;CL:0002320!6.43e-09!365;CL:0000236!2.10e-08!14;CL:0002393!1.21e-07!9;CL:0002397!1.21e-07!9;CL:0000219!5.38e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.43e-19;48!CL:0000236;2.47e-15;13!CL:0002087;1.46e-14;104!CL:0000766;5.08e-14;69!CL:0000860;6.41e-13;33!CL:0002057;6.41e-13;33!CL:0000542;1.99e-12;53!CL:0000791;8.78e-12;18!CL:0000789;8.78e-12;18!CL:0002419;8.78e-12;18!CL:0000738;3.41e-11;136!CL:0000624;5.85e-11;6!CL:0000084;2.28e-10;25!CL:0002393;9.50e-10;6!CL:0002397;9.50e-10;6!CL:0000473;2.10e-08;39!CL:0000234;2.10e-08;39!CL:0000988;6.29e-08;177!CL:0000945;5.28e-07;24!CL:0000775;5.66e-07;3!CL:0000226;8.55e-07;3!CL:0000842;8.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.44e-55,136;CL:0002087,6.32e-48,115;CL:0002031,1.45e-44,120;CL:0000037,1.05e-40,168;CL:0000988,8.03e-39,177;CL:0002032,1.92e-37,161;CL:0000837,1.92e-37,161;CL:0000766,7.48e-27,72;CL:0002009,3.25e-26,61;CL:0000557,1.98e-24,67;CL:0000860,3.89e-24,42;CL:0002057,3.89e-24,42;CL:0002194,6.00e-24,59;CL:0000576,6.00e-24,59;CL:0000040,6.00e-24,59;CL:0000559,6.00e-24,59;CL:0000839,8.71e-22,66;CL:0000473,4.90e-20,48;CL:0000234,4.90e-20,48;CL:0000838,1.43e-19,52;CL:0000542,4.92e-19,53;CL:0000051,4.92e-19,53;CL:0000763,3.73e-18,108;CL:0000049,3.73e-18,108;CL:0002393,9.90e-15,9;CL:0002397,9.90e-15,9;CL:0000236,2.57e-14,14;CL:0000791,8.28e-12,18;CL:0000789,8.28e-12,18;CL:0002420,8.28e-12,18;CL:0002419,8.28e-12,18;CL:0000790,8.28e-12,18;CL:0000624,7.53e-11,6;CL:0000134,1.92e-10,354;CL:0000084,2.09e-10,25;CL:0000827,2.09e-10,25;CL:0002320,7.31e-10,361;CL:0000219,7.39e-08,386;CL:0000945,3.72e-07,24;CL:0000826,3.72e-07,24;CL:0000775,6.06e-07,3;CL:0000226,9.83e-07,3;CL:0000842,9.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.39e-16;42!CL:0000051;1.99e-12;53!CL:0000790;8.78e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.20e-26!102;UBERON:0003061!7.20e-26!102;UBERON:0002193!1.35e-22!112;UBERON:0002371!1.94e-15!80;UBERON:0001474!5.05e-15!86;UBERON:0007023!1.50e-12!115;UBERON:0004765!2.00e-12!101;UBERON:0001434!2.00e-12!101;UBERON:0002405!8.05e-12!115;UBERON:0000178!1.70e-11!15;UBERON:0000179!1.70e-11!15;UBERON:0000463!1.70e-11!15;UBERON:0002384!3.70e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-19;15!UBERON:0000179;3.55e-19;15!UBERON:0000463;3.55e-19;15!UBERON:0002390;1.62e-11;32!UBERON:0002193;2.32e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-38,98;UBERON:0003061,1.36e-38,98;UBERON:0002193,1.76e-36,108;UBERON:0002405,2.10e-22,93;UBERON:0002371,1.31e-21,76;UBERON:0000178,2.65e-19,15;UBERON:0000179,2.65e-19,15;UBERON:0000463,2.65e-19,15;UBERON:0001474,3.24e-19,82;UBERON:0004765,1.54e-16,90;UBERON:0001434,8.01e-14,100;UBERON:0003081,3.11e-11,203;UBERON:0002384,4.45e-09,371 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.410502947249729,0.629686250509434,0.786728553697808,1.15148819429164,0.928896739896456,0,0,0,0.542270404062111,0.568676929949686,0.293600439334847,2.21598163412751,3.40925560699241,2.82114131930607,1.34349284543955,1.6194683300949,1.03030227053675,0.872389432677388,0.755751887377619,0.727752183563449,0.464858073811369,2.46700732813095,1.54853185447552,3.16461631554365,2.0492856522328,2.12834006899727,1.72372840368309,0,1.35426486594342,0,0,0.449446968890169,1.22433556948361,1.92557416245656,1.27867425159808,0.659702600373432,3.39088217956774,3.40979800426155,0.870627715885752,0,0,4.01997864410789,9.38669253156363,1.73751075764093,1.21079900526674,0.736555271975129,0.632924774881769,1.90129757680748,2.33864729961548,1.46761051855863,1.90958672949042,3.00353785683013,1.76798145366788,4.27519115611873,4.37616689837998,2.92262646023414,3.51992488922645,2.73069305631066,4.44754626931777,3.41384178053206,2.40237592221607,2.87376219977242,1.98313461835459,2.86216126360609,21.0608798570496,15.2681669236444,12.6150165281326,0,0.560508562981536,0,5.90129310341499,4.32311839024081,3.90642848099067,0.334372990781356,3.2592226663359,6.62826928028627,3.89653456815823,0.668462741311041,4.71369451959739,1.77227115666897,1.89562704635511,0.768547918354051,1.30059347559878,1.15106533222573,1.65810010671509,1.15921234294021,4.74517002118593,6.68852070224283,2.09071047609954,0.679856056185397,1.14966148080576,2.74901956386104,1.77113784413652,1.59282707162048,1.30216690771284,0,0.752875595388864,0.76791966692651,2.49861453104692,0.710331756132051,0.821127996921047,2.82249440514625,3.7441627409691,5.35850294366356,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.523916301990851,0,0,0.649094787309367,0.522389211897802,0.132957960518865,1.19245312152671,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.264145302039678,0.621984346622316,1.72943944100354,0.6312121671319,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,3.15249216323084,4.09692392233083,5.77543663258868,0,1.30139853857622,0,0,0,19.4741826226267,14.9580729602012,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,7.03011288817817,10.3542816392936,3.09509917629989,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.515205058238611,0.0915694648183434,0.247528499761764,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0,0,0,0.564862804660675,0,0,0,0,5.58192370155386,2.29391162142713,7.40541343326411,5.47933083552915,5.34770955012053,3.24236655596359,4.86028293514303,3.96562588147135,0,0,0,0.743212700502875,0.28853842595289,0.142283686696828,0.478278818186467,0.199579371432817,0.383010740264733,0.423347165447766,0,0,0.456469358066384,0.156679895773023,0,0,0,0.201799707191048,0,0,2.45792611446766,1.11838053946208,1.50164227540718,0.19538809540204,0,0,0.540911356951966,0,0,0,0.146508179271894,0,1.44876399560722,0,0,0,0,0,0.844016498463076,0,0.824019371133798,0.211125408127993,0.19924798825107,2.76283915531148,0,0,0.492339221844278,0,0,0,0.511572370226872,0.493217028184668,4.7896618469388,0,0,0.278304294485554,0,0,0.174919999992391,0,0.1137934482855,0,0,1.03423011972439,0.291604613383254,0.173624994933292,0.885741385813839,0.361789315876224,0,0.442317039724898,0,0.438770794307945,0,0,0.230850775511391,0,0.69169171316418,0,0,0,0,0,0,0.156980256395025,0,0.676786981851542,0.588187602953219,0.503464760927528,0.75901493089674,0.317873157960757,0.210998064528027,0,0.141353071433941,0,0.995261931078505,0.530745387020035,1.22206028986725,1.77912677208373,0.617819694732514,0.208843899010911,0.337005664903385,0,0,0,0,0,0,0,1.22429104652196,1.20054501294127,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0,0.52418000472609,0,0,0,0.0821154570532092,0.484945082442097,0.0882561266915003,0.677942222341597,0.411125773940253,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| ||
|short_description=p@chr1:40845250..40845254,+ | |short_description=p@chr1:40845250..40845254,+ | ||
}} | }} |
Latest revision as of 08:11, 28 July 2015
Short description: | p@chr1:40845250..40845254, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:40845250..40845254, + |
Coexpression cluster: | C2583_CD19_Neutrophils_CD14_Peripheral_Whole_CD4_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-38 | 98 |
blood island | 1.36e-38 | 98 |
hemolymphoid system | 1.76e-36 | 108 |
immune system | 2.10e-22 | 93 |
bone marrow | 1.31e-21 | 76 |
blood | 2.65e-19 | 15 |
haemolymphatic fluid | 2.65e-19 | 15 |
organism substance | 2.65e-19 | 15 |
bone element | 3.24e-19 | 82 |
skeletal element | 1.54e-16 | 90 |
skeletal system | 8.01e-14 | 100 |
lateral plate mesoderm | 3.11e-11 | 203 |
connective tissue | 4.45e-09 | 371 |