FFCP PHASE1:Hg19::chr10:22605374..22605387,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100532731,648,23412 | |EntrezGene=100532731,648,23412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1066,23332 | |HGNC=1066,23332 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T8Z1 | |UniProt=Q5T8Z1 | ||
|association_with_transcript=0bp_to_ENST00000417470,ENST00000479958_5end | |||
|cluster_id=chr10:22605374..22605387,+ | |||
|coexpression_cluster_id=C2050 | |||
|description=CAGE_peak_2_at_COMMD3_5end,CAGE_peak_4_at_BMI1_5end | |||
|id=chr10:22605374..22605387,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.07e-10!31;DOID:1240!2.60e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.28e-11;31!DOID:1240;8.88e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.13e-11,31;DOID:1240,9.70e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.12e-10!94;UBERON:0001016!1.12e-10!94;UBERON:0001049!5.02e-10!57;UBERON:0005068!5.02e-10!57;UBERON:0006241!5.02e-10!57;UBERON:0007135!5.02e-10!57;UBERON:0001017!2.36e-09!82;UBERON:0003080!2.52e-09!42;UBERON:0005743!3.66e-09!86;UBERON:0002780!5.36e-09!41;UBERON:0001890!5.36e-09!41;UBERON:0006240!5.36e-09!41;UBERON:0002616!7.03e-09!59;UBERON:0000955!7.74e-09!69;UBERON:0006238!7.74e-09!69;UBERON:0007023!2.52e-07!115;UBERON:0002346!8.72e-07!90;UBERON:0002791!9.35e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.44e-10,89;UBERON:0001049,1.27e-09,56;UBERON:0005068,1.27e-09,56;UBERON:0006241,1.27e-09,56;UBERON:0007135,1.27e-09,56;UBERON:0002780,7.59e-09,41;UBERON:0001890,7.59e-09,41;UBERON:0003080,7.59e-09,41;UBERON:0006240,7.59e-09,41;UBERON:0001017,8.43e-09,81;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0000955,5.98e-08,68;UBERON:0006238,5.98e-08,68;UBERON:0002346,1.59e-07,86;UBERON:0003075,4.01e-07,82;UBERON:0007284,4.01e-07,82;UBERON:0007023,9.26e-07,114 | |||
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| ||
|short_description=p2@COMMD3,p4@BMI1 | |||
}} | }} |
Latest revision as of 14:47, 17 September 2015
Short description: | p2@COMMD3, p4@BMI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COMMD3_5end, CAGE_peak_4_at_BMI1_5end |
Coexpression cluster: | C2050_chronic_acute_prostate_large_Mast_nonsmall_breast |
Association with transcript: | 0bp_to_ENST00000417470, ENST00000479958_5end |
EntrezGene: | 100532731,648,23412 |
HGNC: | 23332&submit=Submit 1066, 23332 |
UniProt: | Q5T8Z1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.44e-10 | 89 |
neural tube | 1.27e-09 | 56 |
neural rod | 1.27e-09 | 56 |
future spinal cord | 1.27e-09 | 56 |
neural keel | 1.27e-09 | 56 |
regional part of forebrain | 7.59e-09 | 41 |
forebrain | 7.59e-09 | 41 |
anterior neural tube | 7.59e-09 | 41 |
future forebrain | 7.59e-09 | 41 |
central nervous system | 8.43e-09 | 81 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
brain | 5.98e-08 | 68 |
future brain | 5.98e-08 | 68 |
neurectoderm | 1.59e-07 | 86 |
neural plate | 4.01e-07 | 82 |
presumptive neural plate | 4.01e-07 | 82 |
adult organism | 9.26e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.13e-11 | 31 |
leukemia | 9.70e-09 | 39 |