FFCP PHASE1:Hg19::chr22:44464976..44464992,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29780 | |EntrezGene=29780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14653 | |HGNC=14653 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYM8 | |UniProt=B0QYM8 | ||
|association_with_transcript=-4bp_to_NM_001243385_5end | |association_with_transcript=-4bp_to_NM_001243385_5end | ||
|cluster_id=chr22:44464976..44464992,+ | |||
|description=CAGE_peak_3_at_PARVB_5end | |description=CAGE_peak_3_at_PARVB_5end | ||
|id=chr22:44464976..44464992,+ | |id=chr22:44464976..44464992,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.18e-62!172;CL:0000566!3.18e-62!172;CL:0002032!1.38e-59!165;CL:0000837!1.38e-59!165;CL:0000763!3.12e-58!112;CL:0000049!3.12e-58!112;CL:0000988!4.97e-58!182;CL:0000738!5.91e-54!140;CL:0000766!1.60e-51!76;CL:0000557!9.80e-50!71;CL:0002057!1.01e-49!42;CL:0000839!1.20e-48!70;CL:0002031!1.03e-47!124;CL:0000860!2.73e-45!45;CL:0002087!2.63e-42!119;CL:0002009!2.70e-42!65;CL:0002194!2.67e-40!63;CL:0000576!2.67e-40!63;CL:0000040!2.67e-40!63;CL:0000559!2.67e-40!63;CL:0000134!2.54e-15!358;CL:0002320!1.95e-14!365;CL:0002393!6.02e-12!9;CL:0002397!6.02e-12!9;CL:0000219!2.23e-11!390;CL:0000034!8.02e-09!444;CL:0000048!1.30e-08!430;CL:0002274!3.94e-08!5;CL:0000457!3.94e-08!5;CL:0002191!3.94e-08!5;CL:0000097!3.94e-08!5;CL:0000831!3.94e-08!5;CL:0002028!3.94e-08!5;CL:0000723!4.06e-08!436 | |ontology_enrichment_celltype=CL:0000037!3.18e-62!172;CL:0000566!3.18e-62!172;CL:0002032!1.38e-59!165;CL:0000837!1.38e-59!165;CL:0000763!3.12e-58!112;CL:0000049!3.12e-58!112;CL:0000988!4.97e-58!182;CL:0000738!5.91e-54!140;CL:0000766!1.60e-51!76;CL:0000557!9.80e-50!71;CL:0002057!1.01e-49!42;CL:0000839!1.20e-48!70;CL:0002031!1.03e-47!124;CL:0000860!2.73e-45!45;CL:0002087!2.63e-42!119;CL:0002009!2.70e-42!65;CL:0002194!2.67e-40!63;CL:0000576!2.67e-40!63;CL:0000040!2.67e-40!63;CL:0000559!2.67e-40!63;CL:0000134!2.54e-15!358;CL:0002320!1.95e-14!365;CL:0002393!6.02e-12!9;CL:0002397!6.02e-12!9;CL:0000219!2.23e-11!390;CL:0000034!8.02e-09!444;CL:0000048!1.30e-08!430;CL:0002274!3.94e-08!5;CL:0000457!3.94e-08!5;CL:0002191!3.94e-08!5;CL:0000097!3.94e-08!5;CL:0000831!3.94e-08!5;CL:0002028!3.94e-08!5;CL:0000723!4.06e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.69e-56;33!CL:0002057;4.69e-56;33!CL:0000473;1.24e-45;39!CL:0000234;1.24e-45;39!CL:0000576;4.85e-43;48!CL:0000766;4.96e-40;69!CL:0000763;4.61e-23;100!CL:0002087;1.28e-16;104!CL:0000738;4.51e-15;136!CL:0002393;8.89e-14;6!CL:0002397;8.89e-14;6!CL:0000097;4.30e-12;5!CL:0000988;3.42e-11;177!CL:0000094;5.82e-09;8!CL:0000226;1.19e-07;3!CL:0000842;1.19e-07;3!CL:0000767;1.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.50e-83,72;CL:0000557,3.20e-80,67;CL:0000860,4.84e-79,42;CL:0002057,4.84e-79,42;CL:0000839,1.87e-78,66;CL:0000473,1.44e-77,48;CL:0000234,1.44e-77,48;CL:0000763,5.00e-77,108;CL:0000049,5.00e-77,108;CL:0002009,4.58e-68,61;CL:0000037,8.24e-67,168;CL:0000738,4.13e-65,136;CL:0002194,8.12e-65,59;CL:0000576,8.12e-65,59;CL:0000040,8.12e-65,59;CL:0000559,8.12e-65,59;CL:0002032,4.57e-64,161;CL:0000837,4.57e-64,161;CL:0000988,2.37e-62,177;CL:0002031,2.51e-59,120;CL:0002087,8.48e-50,115;CL:0000134,1.06e-20,354;CL:0002320,6.77e-20,361;CL:0002393,3.39e-18,9;CL:0002397,3.39e-18,9;CL:0000219,4.50e-17,386;CL:0000034,1.16e-14,441;CL:0000048,1.21e-13,427;CL:0000723,3.57e-13,433;CL:0000097,4.35e-12,5;CL:0002028,4.35e-12,5;CL:0000094,4.95e-09,8;CL:0000226,1.18e-07,3;CL:0000842,1.18e-07,3;CL:0000767,1.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.43e-56;42!CL:0000049;2.74e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-58!102;UBERON:0003061!1.33e-58!102;UBERON:0002193!6.09e-51!112;UBERON:0002371!2.23e-43!80;UBERON:0001474!7.03e-39!86;UBERON:0004765!3.22e-31!101;UBERON:0001434!3.22e-31!101;UBERON:0002405!1.17e-29!115;UBERON:0003081!6.89e-19!216;UBERON:0000178!9.40e-15!15;UBERON:0000179!9.40e-15!15;UBERON:0000463!9.40e-15!15;UBERON:0002204!2.58e-14!167;UBERON:0002384!1.09e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.81e-21;15!UBERON:0000179;8.81e-21;15!UBERON:0000463;8.81e-21;15!UBERON:0002390;5.42e-12;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.17e-87,98;UBERON:0003061,1.17e-87,98;UBERON:0002193,8.05e-78,108;UBERON:0002371,6.55e-69,76;UBERON:0001474,9.75e-63,82;UBERON:0002405,7.16e-58,93;UBERON:0004765,8.85e-56,90;UBERON:0001434,1.21e-48,100;UBERON:0003081,1.33e-32,203;UBERON:0002204,5.98e-23,167;UBERON:0000178,8.75e-21,15;UBERON:0000179,8.75e-21,15;UBERON:0000463,8.75e-21,15;UBERON:0002384,8.42e-19,371;UBERON:0000926,1.56e-14,315;UBERON:0004120,1.56e-14,315;UBERON:0006603,1.56e-14,315 | |||
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|short_description=p3@PARVB | |short_description=p3@PARVB | ||
}} | }} |
Latest revision as of 02:16, 25 September 2015
Short description: | p3@PARVB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PARVB_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_NM_001243385_5end |
EntrezGene: | PARVB |
HGNC: | 14653 |
UniProt: | B0QYM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.17e-87 | 98 |
blood island | 1.17e-87 | 98 |
hemolymphoid system | 8.05e-78 | 108 |
bone marrow | 6.55e-69 | 76 |
bone element | 9.75e-63 | 82 |
immune system | 7.16e-58 | 93 |
skeletal element | 8.85e-56 | 90 |
skeletal system | 1.21e-48 | 100 |
lateral plate mesoderm | 1.33e-32 | 203 |
musculoskeletal system | 5.98e-23 | 167 |
blood | 8.75e-21 | 15 |
haemolymphatic fluid | 8.75e-21 | 15 |
organism substance | 8.75e-21 | 15 |
connective tissue | 8.42e-19 | 371 |
mesoderm | 1.56e-14 | 315 |
mesoderm-derived structure | 1.56e-14 | 315 |
presumptive mesoderm | 1.56e-14 | 315 |