FFCP PHASE1:Hg19::chr11:75236902..75236968,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:75236902..75236968,-
|short_description=p1@GDPD5
|description=CAGE_peak_1_at_GDPD5_5end
|association_with_transcript=0bp_to_ENST00000336898,ENST0000053144...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81544 | |EntrezGene=81544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28804 | |HGNC=28804 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WTR4 | |UniProt=Q8WTR4 | ||
|association_with_transcript=0bp_to_ENST00000336898,ENST00000531441_5end | |||
|cluster_id=chr11:75236902..75236968,- | |||
|description=CAGE_peak_1_at_GDPD5_5end | |||
|id=chr11:75236902..75236968,- | |||
|ontology_enrichment_celltype=CL:0000115!1.66e-12!35;CL:0002139!4.38e-12!24;CL:0000071!9.47e-11!18;CL:0002546!9.47e-11!18;CL:0002078!2.35e-10!44;CL:0000213!1.81e-08!57;CL:0000215!1.81e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.28e-12;24!CL:0000115;1.56e-11;36!CL:0000071;2.46e-11;18!CL:0002078;7.69e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.52e-13,36;CL:0002139,8.45e-13,24;CL:0002078,2.06e-11,45;CL:0000071,2.25e-11,18;CL:0002546,2.25e-11,18;CL:0000213,6.00e-09,58;CL:0000215,6.00e-09,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.46e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!9.47e-11!18;UBERON:0004638!9.47e-11!18;UBERON:0004852!9.47e-11!18;UBERON:0007023!7.47e-10!115;UBERON:0001049!7.91e-09!57;UBERON:0005068!7.91e-09!57;UBERON:0006241!7.91e-09!57;UBERON:0007135!7.91e-09!57;UBERON:0000487!1.61e-08!22;UBERON:0006914!1.84e-08!25;UBERON:0000955!7.08e-08!69;UBERON:0006238!7.08e-08!69;UBERON:0005743!2.80e-07!86;UBERON:0002616!3.16e-07!59;UBERON:0003075!4.12e-07!86;UBERON:0007284!4.12e-07!86;UBERON:0001017!5.53e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.46e-11;18!UBERON:0001986;2.46e-11;18!UBERON:0004852;2.46e-11;18!UBERON:0006914;1.62e-09;25!UBERON:0000487;2.75e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.25e-11,18;UBERON:0001986,2.25e-11,18;UBERON:0004852,2.25e-11,18;UBERON:0007023,1.06e-09,114;UBERON:0006914,2.00e-09,25;UBERON:0000487,3.21e-09,22;UBERON:0001049,1.04e-08,56;UBERON:0005068,1.04e-08,56;UBERON:0006241,1.04e-08,56;UBERON:0007135,1.04e-08,56;UBERON:0000073,3.46e-08,53;UBERON:0002616,3.46e-08,53;UBERON:0000955,9.24e-08,68;UBERON:0006238,9.24e-08,68;UBERON:0001017,2.61e-07,81;UBERON:0000025,3.99e-07,192;UBERON:0004111,4.51e-07,240;UBERON:0003075,8.97e-07,82;UBERON:0007284,8.97e-07,82;UBERON:0002780,9.75e-07,41;UBERON:0001890,9.75e-07,41;UBERON:0003080,9.75e-07,41;UBERON:0006240,9.75e-07,41 | |||
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| ||
|short_description=p1@GDPD5 | |||
}} | }} |
Latest revision as of 06:20, 20 September 2015
Short description: | p1@GDPD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GDPD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000336898, ENST00000531441_5end |
EntrezGene: | GDPD5 |
HGNC: | 28804 |
UniProt: | Q8WTR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.52e-13 | 36 |
endothelial cell of vascular tree | 8.45e-13 | 24 |
meso-epithelial cell | 2.06e-11 | 45 |
blood vessel endothelial cell | 2.25e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.25e-11 | 18 |
lining cell | 6.00e-09 | 58 |
barrier cell | 6.00e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.25e-11 | 18 |
endothelium | 2.25e-11 | 18 |
cardiovascular system endothelium | 2.25e-11 | 18 |
adult organism | 1.06e-09 | 114 |
squamous epithelium | 2.00e-09 | 25 |
simple squamous epithelium | 3.21e-09 | 22 |
neural tube | 1.04e-08 | 56 |
neural rod | 1.04e-08 | 56 |
future spinal cord | 1.04e-08 | 56 |
neural keel | 1.04e-08 | 56 |
regional part of nervous system | 3.46e-08 | 53 |
regional part of brain | 3.46e-08 | 53 |
brain | 9.24e-08 | 68 |
future brain | 9.24e-08 | 68 |
central nervous system | 2.61e-07 | 81 |
tube | 3.99e-07 | 192 |
anatomical conduit | 4.51e-07 | 240 |
neural plate | 8.97e-07 | 82 |
presumptive neural plate | 8.97e-07 | 82 |
regional part of forebrain | 9.75e-07 | 41 |
forebrain | 9.75e-07 | 41 |
anterior neural tube | 9.75e-07 | 41 |
future forebrain | 9.75e-07 | 41 |