FFCP PHASE1:Hg19::chr17:63052873..63052927,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10672 | |EntrezGene=10672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4381 | |HGNC=4381 | ||
|TSSclassifier=strong | |||
|UniProt=F8W818,Q14344 | |UniProt=F8W818,Q14344 | ||
|association_with_transcript=0bp_to_ENST00000239138,ENST00000439174,NM_006572,uc002jfc.2_5end | |association_with_transcript=0bp_to_ENST00000239138,ENST00000439174,NM_006572,uc002jfc.2_5end | ||
|cluster_id=chr17:63052873..63052927,- | |||
|coexpression_cluster_id=C612 | |||
|description=CAGE_peak_2_at_GNA13_5end | |description=CAGE_peak_2_at_GNA13_5end | ||
|id=chr17:63052873..63052927,- | |id=chr17:63052873..63052927,- | ||
|ontology_enrichment_celltype=CL:0000037!4.10e-37!172;CL:0000566!4.10e-37!172;CL:0000738!1.69e-36!140;CL:0002032!3.37e-34!165;CL:0000837!3.37e-34!165;CL:0000988!7.92e-34!182;CL:0002087!6.93e-27!119;CL:0002031!9.34e-27!124;CL:0000838!1.72e-19!52;CL:0000542!3.07e-19!53;CL:0000051!3.07e-19!53;CL:0000763!1.64e-15!112;CL:0000049!1.64e-15!112;CL:0000766!2.95e-13!76;CL:0002057!2.90e-11!42;CL:0000557!4.62e-11!71;CL:0000791!1.11e-10!18;CL:0000789!1.11e-10!18;CL:0002420!1.11e-10!18;CL:0002419!1.11e-10!18;CL:0000790!1.11e-10!18;CL:0000860!1.34e-09!45;CL:0000084!1.73e-09!25;CL:0000827!1.73e-09!25;CL:0000945!1.79e-09!24;CL:0000826!1.79e-09!24;CL:0002009!5.85e-09!65;CL:0000839!2.11e-08!70;CL:0002194!4.42e-08!63;CL:0000576!4.42e-08!63;CL:0000040!4.42e-08!63;CL:0000559!4.42e-08!63;CL:0000236!9.42e-08!14;CL:0000625!3.13e-07!11 | |ontology_enrichment_celltype=CL:0000037!4.10e-37!172;CL:0000566!4.10e-37!172;CL:0000738!1.69e-36!140;CL:0002032!3.37e-34!165;CL:0000837!3.37e-34!165;CL:0000988!7.92e-34!182;CL:0002087!6.93e-27!119;CL:0002031!9.34e-27!124;CL:0000838!1.72e-19!52;CL:0000542!3.07e-19!53;CL:0000051!3.07e-19!53;CL:0000763!1.64e-15!112;CL:0000049!1.64e-15!112;CL:0000766!2.95e-13!76;CL:0002057!2.90e-11!42;CL:0000557!4.62e-11!71;CL:0000791!1.11e-10!18;CL:0000789!1.11e-10!18;CL:0002420!1.11e-10!18;CL:0002419!1.11e-10!18;CL:0000790!1.11e-10!18;CL:0000860!1.34e-09!45;CL:0000084!1.73e-09!25;CL:0000827!1.73e-09!25;CL:0000945!1.79e-09!24;CL:0000826!1.79e-09!24;CL:0002009!5.85e-09!65;CL:0000839!2.11e-08!70;CL:0002194!4.42e-08!63;CL:0000576!4.42e-08!63;CL:0000040!4.42e-08!63;CL:0000559!4.42e-08!63;CL:0000236!9.42e-08!14;CL:0000625!3.13e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000542;1.51e-11;53!CL:0000791;9.07e-11;18!CL:0000789;9.07e-11;18!CL:0002419;9.07e-11;18!CL:0000860;1.06e-10;33!CL:0002057;1.06e-10;33!CL:0002087;6.85e-10;104!CL:0000945;1.38e-09;24!CL:0000084;1.52e-09;25!CL:0000473;3.17e-08;39!CL:0000234;3.17e-08;39!CL:0000738;3.62e-08;136!CL:0000576;4.53e-08;48!CL:0000236;6.47e-08;13!CL:0000625;2.76e-07;11!CL:0000766;3.58e-07;69!CL:0000988;5.73e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.12e-39,168;CL:0000738,2.16e-39,136;CL:0002032,1.07e-36,161;CL:0000837,1.07e-36,161;CL:0000988,1.42e-36,177;CL:0002087,1.63e-29,115;CL:0002031,2.56e-29,120;CL:0000838,1.71e-19,52;CL:0000542,3.05e-19,53;CL:0000051,3.05e-19,53;CL:0000763,2.05e-17,108;CL:0000049,2.05e-17,108;CL:0000766,1.88e-15,72;CL:0000557,4.35e-13,67;CL:0000860,2.89e-11,42;CL:0002057,2.89e-11,42;CL:0002009,8.20e-11,61;CL:0000791,1.11e-10,18;CL:0000789,1.11e-10,18;CL:0002420,1.11e-10,18;CL:0002419,1.11e-10,18;CL:0000790,1.11e-10,18;CL:0000473,3.01e-10,48;CL:0000234,3.01e-10,48;CL:0000839,4.25e-10,66;CL:0002194,7.70e-10,59;CL:0000576,7.70e-10,59;CL:0000040,7.70e-10,59;CL:0000559,7.70e-10,59;CL:0000084,1.73e-09,25;CL:0000827,1.73e-09,25;CL:0000945,1.78e-09,24;CL:0000826,1.78e-09,24;CL:0000236,9.40e-08,14;CL:0000625,3.12e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.51e-11;53!CL:0000790;9.07e-11;18!CL:0002057;1.94e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-16!102;UBERON:0003061!2.56e-16!102;UBERON:0002193!4.88e-15!112;UBERON:0001474!3.47e-09!86;UBERON:0002371!1.36e-08!80;UBERON:0000178!6.21e-08!15;UBERON:0000179!6.21e-08!15;UBERON:0000463!6.21e-08!15;UBERON:0007023!3.23e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!2.56e-16!102;UBERON:0003061!2.56e-16!102;UBERON:0002193!4.88e-15!112;UBERON:0001474!3.47e-09!86;UBERON:0002371!1.36e-08!80;UBERON:0000178!6.21e-08!15;UBERON:0000179!6.21e-08!15;UBERON:0000463!6.21e-08!15;UBERON:0007023!3.23e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.81e-08;15!UBERON:0000179;7.81e-08;15!UBERON:0000463;7.81e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.24e-18,98;UBERON:0003061,2.24e-18,98;UBERON:0002193,6.47e-17,108;UBERON:0002405,1.92e-11,93;UBERON:0001474,9.77e-11,82;UBERON:0002371,3.83e-10,76;UBERON:0004765,4.68e-09,90;UBERON:0000178,6.20e-08,15;UBERON:0000179,6.20e-08,15;UBERON:0000463,6.20e-08,15;UBERON:0007023,3.89e-07,114;UBERON:0001434,6.21e-07,100 | |||
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| ||
|short_description=p2@GNA13 | |short_description=p2@GNA13 | ||
}} | }} |
Latest revision as of 20:25, 16 September 2015
Short description: | p2@GNA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GNA13_5end |
Coexpression cluster: | C612_Neutrophils_Eosinophils_granulocyte_CD14_CD4_acute_CD19 |
Association with transcript: | 0bp_to_ENST00000239138, ENST00000439174, NM_006572, uc002jfc.2_5end |
EntrezGene: | GNA13 |
HGNC: | 4381 |
UniProt: | F8W818Q14344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.24e-18 | 98 |
blood island | 2.24e-18 | 98 |
hemolymphoid system | 6.47e-17 | 108 |
immune system | 1.92e-11 | 93 |
bone element | 9.77e-11 | 82 |
bone marrow | 3.83e-10 | 76 |
skeletal element | 4.68e-09 | 90 |
blood | 6.20e-08 | 15 |
haemolymphatic fluid | 6.20e-08 | 15 |
organism substance | 6.20e-08 | 15 |
adult organism | 3.89e-07 | 114 |
skeletal system | 6.21e-07 | 100 |