FFCP PHASE1:Hg19::chr17:7462103..7462110,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8741 | |EntrezGene=8741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11928 | |HGNC=11928 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000396545_5end | |association_with_transcript=0bp_to_ENST00000396545_5end | ||
|cluster_id=chr17:7462103..7462110,+ | |||
|coexpression_cluster_id=C3684 | |||
|description=CAGE_peak_14_at_TNFSF13_5end | |description=CAGE_peak_14_at_TNFSF13_5end | ||
|id=chr17:7462103..7462110,+ | |id=chr17:7462103..7462110,+ | ||
|ontology_enrichment_celltype=CL:0000840!8.44e-07!5;CL:0001029!8.44e-07!5 | |ontology_enrichment_celltype=CL:0000840!8.44e-07!5;CL:0001029!8.44e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.94e-21;6!CL:0000840;1.42e-14;5!CL:0000990;9.57e-10;8!CL:0000451;5.54e-08;10!CL:0002619;1.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.49e-21,6;CL:0000840,1.38e-14,5;CL:0001029,1.38e-14,5;CL:0000990,9.38e-10,8;CL:0002009,5.08e-08,61;CL:0000451,5.45e-08,10;CL:0002619,1.19e-07,3;CL:0000557,3.91e-07,67;CL:0002194,7.00e-07,59;CL:0000576,7.00e-07,59;CL:0000040,7.00e-07,59;CL:0000559,7.00e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.47e-11;2!UBERON:0005754;5.57e-07;1!UBERON:0008801;5.88e-07;1!UBERON:0006298;7.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.88e-54!115;UBERON:0001049!1.88e-25!57;UBERON:0005068!1.88e-25!57;UBERON:0006241!1.88e-25!57;UBERON:0007135!1.88e-25!57;UBERON:0002616!3.34e-21!59;UBERON:0002020!4.41e-19!34;UBERON:0003528!4.41e-19!34;UBERON:0001893!1.22e-18!34;UBERON:0002780!1.97e-18!41;UBERON:0001890!1.97e-18!41;UBERON:0006240!1.97e-18!41;UBERON:0000955!2.48e-18!69;UBERON:0006238!2.48e-18!69;UBERON:0002791!6.81e-18!33;UBERON:0001017!8.68e-18!82;UBERON:0003080!8.73e-18!42;UBERON:0005743!2.08e-17!86;UBERON:0001869!5.78e-17!32;UBERON:0003075!8.33e-17!86;UBERON:0007284!8.33e-17!86;UBERON:0002346!1.90e-16!90;UBERON:0000073!1.58e-14!94;UBERON:0001016!1.58e-14!94;UBERON:0000062!3.27e-13!511;UBERON:0000153!8.42e-13!129;UBERON:0007811!8.42e-13!129;UBERON:0001950!1.10e-12!20;UBERON:0002619!1.57e-12!22;UBERON:0002420!1.15e-11!9;UBERON:0007245!1.15e-11!9;UBERON:0010009!1.15e-11!9;UBERON:0010011!1.15e-11!9;UBERON:0000454!1.15e-11!9;UBERON:0003056!1.27e-11!61;UBERON:0002308!1.86e-11!9;UBERON:0000125!1.86e-11!9;UBERON:0000033!2.94e-11!123;UBERON:0000956!1.66e-10!25;UBERON:0000203!1.66e-10!25;UBERON:0000477!2.11e-10!286;UBERON:0004111!2.77e-10!241;UBERON:0000025!1.36e-09!194;UBERON:0009663!3.53e-09!7;UBERON:0003076!6.39e-09!15;UBERON:0003057!6.39e-09!15;UBERON:0004733!7.17e-08!12;UBERON:0002028!7.17e-08!12;UBERON:0007277!7.17e-08!12;UBERON:0000922!8.80e-08!612;UBERON:0002298!1.16e-07!8;UBERON:0000200!1.74e-07!6;UBERON:0000467!1.91e-07!625;UBERON:0002050!2.08e-07!605;UBERON:0005423!2.08e-07!605;UBERON:0000480!2.23e-07!626;UBERON:0000468!2.64e-07!659;UBERON:0004732!4.24e-07!13;UBERON:0000923!4.59e-07!604;UBERON:0005291!4.59e-07!604;UBERON:0006598!4.59e-07!604;UBERON:0002532!4.59e-07!604;UBERON:0000064!6.64e-07!219 | |ontology_enrichment_uberon=UBERON:0007023!4.88e-54!115;UBERON:0001049!1.88e-25!57;UBERON:0005068!1.88e-25!57;UBERON:0006241!1.88e-25!57;UBERON:0007135!1.88e-25!57;UBERON:0002616!3.34e-21!59;UBERON:0002020!4.41e-19!34;UBERON:0003528!4.41e-19!34;UBERON:0001893!1.22e-18!34;UBERON:0002780!1.97e-18!41;UBERON:0001890!1.97e-18!41;UBERON:0006240!1.97e-18!41;UBERON:0000955!2.48e-18!69;UBERON:0006238!2.48e-18!69;UBERON:0002791!6.81e-18!33;UBERON:0001017!8.68e-18!82;UBERON:0003080!8.73e-18!42;UBERON:0005743!2.08e-17!86;UBERON:0001869!5.78e-17!32;UBERON:0003075!8.33e-17!86;UBERON:0007284!8.33e-17!86;UBERON:0002346!1.90e-16!90;UBERON:0000073!1.58e-14!94;UBERON:0001016!1.58e-14!94;UBERON:0000062!3.27e-13!511;UBERON:0000153!8.42e-13!129;UBERON:0007811!8.42e-13!129;UBERON:0001950!1.10e-12!20;UBERON:0002619!1.57e-12!22;UBERON:0002420!1.15e-11!9;UBERON:0007245!1.15e-11!9;UBERON:0010009!1.15e-11!9;UBERON:0010011!1.15e-11!9;UBERON:0000454!1.15e-11!9;UBERON:0003056!1.27e-11!61;UBERON:0002308!1.86e-11!9;UBERON:0000125!1.86e-11!9;UBERON:0000033!2.94e-11!123;UBERON:0000956!1.66e-10!25;UBERON:0000203!1.66e-10!25;UBERON:0000477!2.11e-10!286;UBERON:0004111!2.77e-10!241;UBERON:0000025!1.36e-09!194;UBERON:0009663!3.53e-09!7;UBERON:0003076!6.39e-09!15;UBERON:0003057!6.39e-09!15;UBERON:0004733!7.17e-08!12;UBERON:0002028!7.17e-08!12;UBERON:0007277!7.17e-08!12;UBERON:0000922!8.80e-08!612;UBERON:0002298!1.16e-07!8;UBERON:0000200!1.74e-07!6;UBERON:0000467!1.91e-07!625;UBERON:0002050!2.08e-07!605;UBERON:0005423!2.08e-07!605;UBERON:0000480!2.23e-07!626;UBERON:0000468!2.64e-07!659;UBERON:0004732!4.24e-07!13;UBERON:0000923!4.59e-07!604;UBERON:0005291!4.59e-07!604;UBERON:0006598!4.59e-07!604;UBERON:0002532!4.59e-07!604;UBERON:0000064!6.64e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.72e-12;2!UBERON:0003127;8.34e-12;2!UBERON:0001873;4.47e-11;2!UBERON:0002420;3.72e-09;9!UBERON:0000125;3.72e-09;9!UBERON:0007245;3.72e-09;9!UBERON:0002308;3.72e-09;9!UBERON:0010009;3.72e-09;9!UBERON:0010011;3.72e-09;9!UBERON:0000454;3.72e-09;9!UBERON:0001044;8.06e-09;6!UBERON:0003293;8.06e-09;6!UBERON:0003294;8.06e-09;6!UBERON:0010047;8.06e-09;6!UBERON:0003408;8.06e-09;6!UBERON:0000167;8.06e-09;6!UBERON:0005383;1.15e-07;3!UBERON:0005382;1.15e-07;3!UBERON:0003528;1.43e-07;34!UBERON:0002020;1.43e-07;34!UBERON:0009663;5.05e-07;7!UBERON:0000998;5.57e-07;1!UBERON:0006868;5.57e-07;1!UBERON:0001831;5.88e-07;1!UBERON:0001567;5.88e-07;1!UBERON:0001736;7.34e-07;1!UBERON:0000029;9.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.03e-12,114;UBERON:0001829,3.53e-12,2;UBERON:0003127,1.09e-11,2;UBERON:0001873,5.23e-11,2;UBERON:0010122,5.23e-11,2;UBERON:0002420,3.73e-09,9;UBERON:0007245,3.73e-09,9;UBERON:0010009,3.73e-09,9;UBERON:0010011,3.73e-09,9;UBERON:0000454,3.73e-09,9;UBERON:0000125,3.81e-09,9;UBERON:0002308,3.81e-09,9;UBERON:0001044,8.40e-09,6;UBERON:0003293,8.40e-09,6;UBERON:0003294,8.40e-09,6;UBERON:0010047,8.40e-09,6;UBERON:0000167,8.40e-09,6;UBERON:0003528,4.03e-08,34;UBERON:0002020,4.03e-08,34;UBERON:0000073,1.05e-07,53;UBERON:0002616,1.05e-07,53;UBERON:0005383,1.28e-07,3;UBERON:0005382,1.28e-07,3;UBERON:0001049,3.31e-07,56;UBERON:0005068,3.31e-07,56;UBERON:0006241,3.31e-07,56;UBERON:0007135,3.31e-07,56;UBERON:0000998,5.58e-07,1;UBERON:0006868,5.58e-07,1;UBERON:0001831,5.90e-07,1;UBERON:0001567,5.90e-07,1;UBERON:0008801,5.90e-07,1;UBERON:0009663,6.45e-07,7;UBERON:0001736,6.96e-07,1;UBERON:0006298,6.96e-07,1 | |||
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| ||
|short_description=p14@TNFSF13 | |short_description=p14@TNFSF13 | ||
}} | }} |
Latest revision as of 16:16, 17 September 2015
Short description: | p14@TNFSF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TNFSF13_5end |
Coexpression cluster: | C3684_salivary_parotid_seminal_submaxillary_Dendritic_medulla_Alveolar |
Association with transcript: | 0bp_to_ENST00000396545_5end |
EntrezGene: | TNFSF13 |
HGNC: | 11928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.49e-21 | 6 |
immature conventional dendritic cell | 1.38e-14 | 5 |
common dendritic progenitor | 1.38e-14 | 5 |
conventional dendritic cell | 9.38e-10 | 8 |
macrophage dendritic cell progenitor | 5.08e-08 | 61 |
dendritic cell | 5.45e-08 | 10 |
adult endothelial progenitor cell | 1.19e-07 | 3 |
granulocyte monocyte progenitor cell | 3.91e-07 | 67 |
monopoietic cell | 7.00e-07 | 59 |
monocyte | 7.00e-07 | 59 |
monoblast | 7.00e-07 | 59 |
promonocyte | 7.00e-07 | 59 |