FFCP PHASE1:Hg19::chr2:20425158..20425206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6382 | |EntrezGene=6382 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10658 | |HGNC=10658 | ||
|TSSclassifier=strong | |||
|UniProt=P18827 | |UniProt=P18827 | ||
|association_with_transcript=0bp_to_ENST00000381150,NM_001006946,uc002rdp.1_5end | |association_with_transcript=0bp_to_ENST00000381150,NM_001006946,uc002rdp.1_5end | ||
|cluster_id=chr2:20425158..20425206,- | |||
|coexpression_cluster_id=C572 | |||
|description=CAGE_peak_6_at_SDC1_5end | |description=CAGE_peak_6_at_SDC1_5end | ||
|id=chr2:20425158..20425206,- | |id=chr2:20425158..20425206,- | ||
|ontology_enrichment_celltype=CL:0000066!4.78e-31!254;CL:0002076!4.29e-16!43;CL:0000223!4.20e-15!59;CL:0002321!6.84e-14!248;CL:0000220!9.27e-14!246;CL:0002368!1.54e-08!13;CL:0000221!1.39e-07!71;CL:0000082!3.36e-07!19;CL:0002251!6.37e-07!21 | |ontology_enrichment_celltype=CL:0000066!4.78e-31!254;CL:0002076!4.29e-16!43;CL:0000223!4.20e-15!59;CL:0002321!6.84e-14!248;CL:0000220!9.27e-14!246;CL:0002368!1.54e-08!13;CL:0000221!1.39e-07!71;CL:0000082!3.36e-07!19;CL:0002251!6.37e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.21e-14;42!CL:0002368;1.45e-09;13!CL:0002251;3.82e-08;20!CL:0000082;5.09e-08;19!CL:0002202;3.42e-07;9!CL:0002632;3.42e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.20e-28,253;CL:0002076,7.26e-19,42;CL:0000223,5.49e-17,58;CL:0002321,4.96e-11,250;CL:0002368,1.10e-09,13;CL:0002251,4.08e-08,20;CL:0000082,8.86e-08,19;CL:0002202,3.44e-07,9;CL:0002632,3.44e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.54e-09;58!UBERON:0001041;2.25e-08;30 | |||
|ontology_enrichment_disease=DOID:305!9.47e-16!106;DOID:0050687!2.86e-15!143;DOID:1749!8.47e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.05e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.88e-14,106;DOID:0050687,6.27e-13,143;DOID:1749,7.99e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.32e-27!169;UBERON:0000925!6.32e-27!169;UBERON:0006595!6.32e-27!169;UBERON:0001007!1.74e-21!155;UBERON:0001555!1.74e-21!155;UBERON:0007026!1.74e-21!155;UBERON:0000475!1.97e-17!365;UBERON:0004921!6.29e-17!129;UBERON:0004185!6.29e-17!129;UBERON:0000077!9.38e-17!130;UBERON:0000466!1.99e-16!126;UBERON:0000481!7.70e-15!347;UBERON:0000464!7.90e-15!104;UBERON:0003104!9.45e-15!238;UBERON:0009142!9.45e-15!238;UBERON:0001004!1.67e-14!72;UBERON:0005911!1.90e-13!82;UBERON:0002100!1.91e-12!216;UBERON:0009569!2.34e-12!113;UBERON:0001041!2.90e-12!98;UBERON:0001048!9.86e-12!168;UBERON:0005153!2.40e-11!37;UBERON:0003102!3.88e-11!95;UBERON:0005177!4.97e-11!107;UBERON:0000065!1.13e-10!53;UBERON:0005178!2.26e-10!34;UBERON:0002224!2.26e-10!34;UBERON:0000064!4.59e-10!219;UBERON:0000468!5.57e-10!659;UBERON:0000062!7.15e-10!511;UBERON:0008947!1.11e-09!38;UBERON:0003258!1.11e-09!38;UBERON:0005181!1.42e-09!35;UBERON:0000161!9.17e-09!35;UBERON:0000480!1.70e-08!626;UBERON:0005157!1.93e-08!51;UBERON:0002048!2.76e-08!22;UBERON:0000117!2.76e-08!22;UBERON:0000171!2.76e-08!22;UBERON:0000170!2.76e-08!22;UBERON:0005597!2.76e-08!22;UBERON:0000118!2.76e-08!22;UBERON:0001444!3.06e-08!48;UBERON:0000467!3.37e-08!625;UBERON:0001008!4.14e-08!45;UBERON:0000072!6.15e-08!46;UBERON:0000915!6.99e-08!52;UBERON:0003100!8.29e-08!41;UBERON:0006554!8.55e-08!44;UBERON:0000063!1.10e-07!97;UBERON:0000922!2.53e-07!612;UBERON:0004802!3.36e-07!19;UBERON:0000115!3.36e-07!19;UBERON:0000119!4.45e-07!312;UBERON:0000166!6.81e-07!21;UBERON:0005156!9.84e-07!59;UBERON:0000990!9.84e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;1.31e-10;34!UBERON:0002224;1.31e-10;34!UBERON:0005181;5.11e-10;35!UBERON:0004807;1.04e-09;22!UBERON:0002048;3.38e-09;22!UBERON:0000117;3.38e-09;22!UBERON:0000171;3.38e-09;22!UBERON:0000170;3.38e-09;22!UBERON:0005911;3.15e-08;36!UBERON:0004802;5.09e-08;19!UBERON:0000115;5.09e-08;19!UBERON:0000065;1.74e-07;44!UBERON:0006554;5.51e-07;30!UBERON:0001008;5.51e-07;30!UBERON:0001004;6.71e-07;65 | |||
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| ||
|short_description=p6@SDC1 | |short_description=p6@SDC1 | ||
}} | }} |
Latest revision as of 15:39, 19 September 2015
Short description: | p6@SDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SDC1_5end |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | 0bp_to_ENST00000381150, NM_001006946, uc002rdp.1_5end |
EntrezGene: | SDC1 |
HGNC: | 10658 |
UniProt: | P18827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.20e-28 | 253 |
endo-epithelial cell | 7.26e-19 | 42 |
endodermal cell | 5.49e-17 | 58 |
embryonic cell | 4.96e-11 | 250 |
respiratory epithelial cell | 1.10e-09 | 13 |
epithelial cell of alimentary canal | 4.08e-08 | 20 |
epithelial cell of lung | 8.86e-08 | 19 |
epithelial cell of tracheobronchial tree | 3.44e-07 | 9 |
epithelial cell of lower respiratory tract | 3.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.88e-14 | 106 |
cell type cancer | 6.27e-13 | 143 |
squamous cell carcinoma | 7.99e-09 | 14 |