FFCP PHASE1:Hg19::chr3:112497974..112498021,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:112497974..112498021,+ | |||
|description=CAGE_peak_at_chr3:112497974..112498021,+ | |description=CAGE_peak_at_chr3:112497974..112498021,+ | ||
|id=chr3:112497974..112498021,+ | |id=chr3:112497974..112498021,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.35e-23!180;CL:0000192!3.30e-22!42;CL:0000514!3.30e-22!42;CL:0000359!9.34e-22!32;CL:0000187!1.02e-20!54;CL:0000680!3.47e-19!57;CL:0000056!3.47e-19!57;CL:0000355!3.47e-19!57;CL:0000183!2.97e-18!59;CL:0000393!8.21e-18!60;CL:0000211!8.21e-18!60;CL:0000057!5.23e-12!75;CL:0000048!6.21e-11!430;CL:0000723!1.68e-10!436;CL:0000034!6.03e-10!444;CL:0002334!1.22e-09!12;CL:1000306!4.81e-09!4;CL:0002547!4.81e-09!4;CL:0002594!9.35e-08!4;CL:0002494!1.24e-07!16;CL:0002579!1.37e-07!3;CL:0000222!3.40e-07!119;CL:0002615!4.88e-07!3 | |ontology_enrichment_celltype=CL:0000055!5.35e-23!180;CL:0000192!3.30e-22!42;CL:0000514!3.30e-22!42;CL:0000359!9.34e-22!32;CL:0000187!1.02e-20!54;CL:0000680!3.47e-19!57;CL:0000056!3.47e-19!57;CL:0000355!3.47e-19!57;CL:0000183!2.97e-18!59;CL:0000393!8.21e-18!60;CL:0000211!8.21e-18!60;CL:0000057!5.23e-12!75;CL:0000048!6.21e-11!430;CL:0000723!1.68e-10!436;CL:0000034!6.03e-10!444;CL:0002334!1.22e-09!12;CL:1000306!4.81e-09!4;CL:0002547!4.81e-09!4;CL:0002594!9.35e-08!4;CL:0002494!1.24e-07!16;CL:0002579!1.37e-07!3;CL:0000222!3.40e-07!119;CL:0002615!4.88e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002494;2.59e-20;16!CL:0002579;2.12e-17;3!CL:0002615;5.00e-16;3!CL:1000306;3.39e-13;4!CL:0002547;3.39e-13;4!CL:0002334;4.42e-11;12!CL:0002548;9.70e-09;6!CL:0000359;1.01e-08;32!CL:0000746;3.81e-08;3!CL:0002592;3.81e-08;3!CL:0000192;7.74e-08;43!CL:0002591;8.96e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.39e-20,16;CL:0002579,2.44e-17,3;CL:0002615,6.68e-16,3;CL:1000306,3.33e-13,4;CL:0002547,3.33e-13,4;CL:0002334,4.48e-11,12;CL:0000057,5.02e-11,76;CL:0000187,1.19e-09,55;CL:0000359,1.49e-09,32;CL:0000680,4.82e-09,58;CL:0000056,4.82e-09,58;CL:0000355,4.82e-09,58;CL:0002548,7.56e-09,6;CL:0000192,1.57e-08,43;CL:0000514,1.57e-08,43;CL:0000393,1.69e-08,61;CL:0000211,1.69e-08,61;CL:0000746,2.97e-08,3;CL:0000513,2.97e-08,3;CL:0002592,3.95e-08,3;CL:0000048,4.94e-07,427;CL:0000723,7.66e-07,433;CL:0002591,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000513;3.81e-08;3!CL:0000514;7.74e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;5.34e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,5.07e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.07e-17!42;UBERON:0003509!1.07e-17!42;UBERON:0004572!1.07e-17!42;UBERON:0001134!2.19e-17!61;UBERON:0002036!2.19e-17!61;UBERON:0003082!2.19e-17!61;UBERON:0004872!4.69e-17!84;UBERON:0002385!1.42e-16!63;UBERON:0001015!1.42e-16!63;UBERON:0000383!1.42e-16!63;UBERON:0001981!2.50e-15!60;UBERON:0007500!2.50e-15!60;UBERON:0004537!2.50e-15!60;UBERON:0006965!2.50e-15!60;UBERON:0004535!2.09e-14!110;UBERON:0004290!4.11e-14!70;UBERON:0000486!6.25e-14!82;UBERON:0002049!6.43e-14!79;UBERON:0007798!6.43e-14!79;UBERON:0001009!9.50e-14!113;UBERON:0003688!5.77e-13!6;UBERON:0002358!5.77e-13!6;UBERON:0003684!5.77e-13!6;UBERON:0001178!5.77e-13!6;UBERON:0000055!2.32e-12!69;UBERON:0004573!3.01e-12!33;UBERON:0004571!3.01e-12!33;UBERON:0003914!3.83e-11!118;UBERON:0000914!1.07e-10!83;UBERON:0002329!1.07e-10!83;UBERON:0003077!1.07e-10!83;UBERON:0003059!1.07e-10!83;UBERON:0007282!1.07e-10!83;UBERON:0009618!1.07e-10!83;UBERON:0007285!1.07e-10!83;UBERON:0000948!2.80e-10!24;UBERON:0005498!2.80e-10!24;UBERON:0004140!2.80e-10!24;UBERON:0009881!2.80e-10!24;UBERON:0004141!2.80e-10!24;UBERON:0003084!2.80e-10!24;UBERON:0007005!2.80e-10!24;UBERON:0004139!2.80e-10!24;UBERON:0004291!2.80e-10!24;UBERON:0000415!4.81e-09!4;UBERON:0007240!4.81e-09!4;UBERON:0005742!4.81e-09!4;UBERON:0005734!4.81e-09!4;UBERON:0004664!4.81e-09!4;UBERON:0004663!4.81e-09!4;UBERON:0007100!8.63e-09!27;UBERON:0004457!9.27e-08!12;UBERON:0000042!9.27e-08!12;UBERON:0001310!9.35e-08!4;UBERON:0003498!3.46e-07!5;UBERON:0005985!3.46e-07!5;UBERON:0000490!4.58e-07!138;UBERON:0004145!7.41e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.26e-31;6!UBERON:0002358;1.26e-31;6!UBERON:0003684;1.26e-31;6!UBERON:0001178;1.26e-31;6!UBERON:0004457;6.42e-21;9!UBERON:0000042;6.42e-21;9!UBERON:0000948;1.93e-14;22!UBERON:0004797;3.39e-13;4!UBERON:0000415;3.39e-13;4!UBERON:0007240;3.39e-13;4!UBERON:0005742;3.39e-13;4!UBERON:0005734;3.39e-13;4!UBERON:0004664;3.39e-13;4!UBERON:0004663;3.39e-13;4!UBERON:0007100;1.47e-12;25!UBERON:0004573;6.11e-12;33!UBERON:0004571;6.11e-12;33!UBERON:0001637;1.08e-11;42!UBERON:0003509;1.08e-11;42!UBERON:0004572;1.08e-11;42!UBERON:0003498;3.81e-08;3!UBERON:0005985;3.81e-08;3!UBERON:0001621;3.81e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.95e-31,6;UBERON:0002358,1.95e-31,6;UBERON:0003684,1.95e-31,6;UBERON:0001178,1.95e-31,6;UBERON:0000948,7.81e-17,24;UBERON:0005498,7.81e-17,24;UBERON:0004140,7.81e-17,24;UBERON:0009881,7.81e-17,24;UBERON:0004141,7.81e-17,24;UBERON:0003084,7.81e-17,24;UBERON:0007005,7.81e-17,24;UBERON:0004139,7.81e-17,24;UBERON:0004291,7.81e-17,24;UBERON:0004457,1.83e-15,12;UBERON:0000042,1.83e-15,12;UBERON:0004872,3.90e-15,83;UBERON:0007100,8.64e-15,27;UBERON:0004573,1.29e-14,33;UBERON:0004571,1.29e-14,33;UBERON:0001637,1.71e-13,42;UBERON:0003509,1.71e-13,42;UBERON:0004572,1.71e-13,42;UBERON:0000415,3.33e-13,4;UBERON:0007240,3.33e-13,4;UBERON:0005742,3.33e-13,4;UBERON:0005734,3.33e-13,4;UBERON:0004664,3.33e-13,4;UBERON:0004663,3.33e-13,4;UBERON:0003914,4.57e-11,117;UBERON:0004535,1.21e-10,109;UBERON:0003498,2.62e-10,5;UBERON:0005985,2.62e-10,5;UBERON:0001009,2.92e-10,112;UBERON:0007500,5.37e-09,59;UBERON:0001981,5.37e-09,59;UBERON:0004537,5.37e-09,59;UBERON:0006965,5.37e-09,59;UBERON:0001134,2.50e-08,62;UBERON:0002036,2.50e-08,62;UBERON:0003082,2.50e-08,62;UBERON:0001621,3.95e-08,3;UBERON:0002385,5.28e-08,64;UBERON:0001015,5.28e-08,64;UBERON:0000383,5.28e-08,64;UBERON:0004797,9.90e-08,7;UBERON:0000055,1.56e-07,68;UBERON:0002329,5.13e-07,71;UBERON:0003059,5.13e-07,71;UBERON:0007282,5.13e-07,71;UBERON:0004290,5.13e-07,71;UBERON:0009618,5.13e-07,71;UBERON:0003077,6.84e-07,72;UBERON:0007285,6.84e-07,72;UBERON:0007524,9.05e-07,73 | |||
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| ||
|short_description=p@chr3:112497974..112498021,+ | |short_description=p@chr3:112497974..112498021,+ | ||
}} | }} |
Latest revision as of 14:21, 29 July 2015
Short description: | p@chr3:112497974..112498021, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112497974..112498021, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.39e-20 | 16 |
omentum preadipocyte | 2.44e-17 | 3 |
adipocyte of omentum tissue | 6.68e-16 | 3 |
fibroblast of tunica adventitia of artery | 3.33e-13 | 4 |
fibroblast of the aortic adventitia | 3.33e-13 | 4 |
preadipocyte | 4.48e-11 | 12 |
fibroblast | 5.02e-11 | 76 |
muscle cell | 1.19e-09 | 55 |
vascular associated smooth muscle cell | 1.49e-09 | 32 |
muscle precursor cell | 4.82e-09 | 58 |
myoblast | 4.82e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.82e-09 | 58 |
cardiac fibroblast | 7.56e-09 | 6 |
smooth muscle cell | 1.57e-08 | 43 |
smooth muscle myoblast | 1.57e-08 | 43 |
electrically responsive cell | 1.69e-08 | 61 |
electrically active cell | 1.69e-08 | 61 |
cardiac muscle cell | 2.97e-08 | 3 |
cardiac muscle myoblast | 2.97e-08 | 3 |
smooth muscle cell of the coronary artery | 3.95e-08 | 3 |
multi fate stem cell | 4.94e-07 | 427 |
somatic stem cell | 7.66e-07 | 433 |
smooth muscle cell of the pulmonary artery | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 5.07e-08 | 3 |