FFCP PHASE1:Hg19::chr19:4543382..4543387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:4543382..4543387,- | |||
|description=CAGE_peak_at_chr19:4543382..4543387,- | |description=CAGE_peak_at_chr19:4543382..4543387,- | ||
|id=chr19:4543382..4543387,- | |id=chr19:4543382..4543387,- | ||
|ontology_enrichment_celltype=CL:0000115!5.58e-18!35;CL:0002139!3.61e-16!24;CL:0000213!4.89e-14!57;CL:0000215!4.89e-14!57;CL:0002078!1.22e-13!44;CL:0002057!1.34e-10!42;CL:0000071!1.73e-09!18;CL:0002546!1.73e-09!18;CL:0000860!2.12e-09!45;CL:0005020!3.23e-09!6;CL:0002138!3.23e-09!6;CL:0005022!3.23e-09!6;CL:0002194!5.84e-08!63;CL:0000576!5.84e-08!63;CL:0000040!5.84e-08!63;CL:0000559!5.84e-08!63;CL:0002009!1.78e-07!65 | |ontology_enrichment_celltype=CL:0000115!5.58e-18!35;CL:0002139!3.61e-16!24;CL:0000213!4.89e-14!57;CL:0000215!4.89e-14!57;CL:0002078!1.22e-13!44;CL:0002057!1.34e-10!42;CL:0000071!1.73e-09!18;CL:0002546!1.73e-09!18;CL:0000860!2.12e-09!45;CL:0005020!3.23e-09!6;CL:0002138!3.23e-09!6;CL:0005022!3.23e-09!6;CL:0002194!5.84e-08!63;CL:0000576!5.84e-08!63;CL:0000040!5.84e-08!63;CL:0000559!5.84e-08!63;CL:0002009!1.78e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.66e-28;24!CL:0000115;5.42e-28;36!CL:0002138;1.25e-26;6!CL:0000860;6.39e-23;33!CL:0002057;6.39e-23;33!CL:0002078;5.84e-18;45!CL:0000473;1.10e-14;39!CL:0000234;1.10e-14;39!CL:0000576;7.09e-12;48!CL:1000413;9.60e-12;9!CL:0000071;8.15e-11;18!CL:0000213;3.95e-10;58!CL:0000215;3.95e-10;58!CL:0002545;9.77e-10;2!CL:0002188;1.29e-08;5!CL:0002544;3.60e-07;6!CL:0002144;9.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.09e-31,36;CL:0002139,2.53e-28,24;CL:0005020,9.16e-27,6;CL:0002138,9.16e-27,6;CL:0005022,9.16e-27,6;CL:0002078,2.74e-24,45;CL:0000860,7.95e-19,42;CL:0002057,7.95e-19,42;CL:0000213,6.43e-18,58;CL:0000215,6.43e-18,58;CL:0000473,4.77e-16,48;CL:0000234,4.77e-16,48;CL:0002194,3.60e-12,59;CL:0000576,3.60e-12,59;CL:0000040,3.60e-12,59;CL:0000559,3.60e-12,59;CL:1000413,5.69e-12,9;CL:0002009,1.14e-11,61;CL:0000071,6.00e-11,18;CL:0002546,6.00e-11,18;CL:0000839,1.48e-10,66;CL:0000557,2.36e-10,67;CL:0002545,7.24e-10,2;CL:0000766,2.01e-09,72;CL:0002188,1.23e-08,5;CL:0000222,1.42e-08,121;CL:0002544,3.19e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;1.25e-26;6!CL:0002057;1.18e-15;42!CL:0002546;8.15e-11;18!UBERON:0010122;3.66e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001473;8.22e-20;8!UBERON:0004536;8.22e-20;8!UBERON:0006558;8.22e-20;8!UBERON:0002465;1.03e-15;10!UBERON:0005383;6.78e-13;3!UBERON:0005382;6.78e-13;3!UBERON:0003915;9.60e-12;9!UBERON:0004700;9.60e-12;9!UBERON:0001917;9.60e-12;9!UBERON:0004638;8.15e-11;18!UBERON:0001986;8.15e-11;18!UBERON:0004852;8.15e-11;18!UBERON:0002791;3.17e-10;32!UBERON:0001869;3.37e-10;32!UBERON:0003528;4.69e-10;34!UBERON:0002020;4.69e-10;34!UBERON:0000369;8.58e-10;4!UBERON:0002435;8.58e-10;4!UBERON:0000204;8.58e-10;4!UBERON:0005800;9.77e-10;2!UBERON:0001515;9.77e-10;2!UBERON:0001873;3.66e-09;2!UBERON:0001954;3.66e-09;2!UBERON:0003022;3.66e-09;2!UBERON:0002421;3.66e-09;2!UBERON:0002600;3.66e-09;2!UBERON:0001893;5.89e-09;34!UBERON:0000487;1.14e-08;22!UBERON:0002619;8.17e-08;22!UBERON:0006914;1.63e-07;25!UBERON:0002780;7.81e-07;41!UBERON:0001890;7.81e-07;41!UBERON:0000956;8.28e-07;25!UBERON:0000203;8.28e-07;25!UBERON:0010523;9.44e-07;3!UBERON:0001915;9.44e-07;3!UBERON:0001982;9.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,6.52e-20,8;UBERON:0004536,6.52e-20,8;UBERON:0006558,6.52e-20,8;UBERON:0002465,8.53e-16,10;UBERON:0002405,6.93e-15,93;UBERON:0005383,2.95e-13,3;UBERON:0005382,2.95e-13,3;UBERON:0002193,3.68e-12,108;UBERON:0003915,5.69e-12,9;UBERON:0004700,5.69e-12,9;UBERON:0001917,5.69e-12,9;UBERON:0004638,6.00e-11,18;UBERON:0001986,6.00e-11,18;UBERON:0004852,6.00e-11,18;UBERON:0002791,2.02e-10,32;UBERON:0001869,2.02e-10,32;UBERON:0000369,4.63e-10,4;UBERON:0002435,4.63e-10,4;UBERON:0000204,4.63e-10,4;UBERON:0010082,4.63e-10,4;UBERON:0005800,7.24e-10,2;UBERON:0001515,7.24e-10,2;UBERON:0003528,1.01e-09,34;UBERON:0002020,1.01e-09,34;UBERON:0001893,1.01e-09,34;UBERON:0000055,1.63e-09,68;UBERON:0001873,2.52e-09,2;UBERON:0010122,2.52e-09,2;UBERON:0001954,4.17e-09,2;UBERON:0003022,4.17e-09,2;UBERON:0002421,4.17e-09,2;UBERON:0002600,4.17e-09,2;UBERON:0000487,8.91e-09,22;UBERON:0002371,9.06e-09,76;UBERON:0004111,3.60e-08,240;UBERON:0003081,6.34e-08,203;UBERON:0001474,6.57e-08,82;UBERON:0002049,6.57e-08,78;UBERON:0007798,6.57e-08,78;UBERON:0002780,8.38e-08,41;UBERON:0001890,8.38e-08,41;UBERON:0003080,8.38e-08,41;UBERON:0006240,8.38e-08,41;UBERON:0002619,1.19e-07,22;UBERON:0006914,1.32e-07,25;UBERON:0004765,6.06e-07,90 | |||
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|short_description=p@chr19:4543382..4543387,- | |short_description=p@chr19:4543382..4543387,- | ||
}} | }} |
Latest revision as of 14:48, 27 July 2015
Short description: | p@chr19:4543382..4543387, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:4543382..4543387, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.09e-31 | 36 |
endothelial cell of vascular tree | 2.53e-28 | 24 |
lymphangioblast | 9.16e-27 | 6 |
endothelial cell of lymphatic vessel | 9.16e-27 | 6 |
vascular lymphangioblast | 9.16e-27 | 6 |
meso-epithelial cell | 2.74e-24 | 45 |
classical monocyte | 7.95e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.95e-19 | 42 |
lining cell | 6.43e-18 | 58 |
barrier cell | 6.43e-18 | 58 |
defensive cell | 4.77e-16 | 48 |
phagocyte | 4.77e-16 | 48 |
monopoietic cell | 3.60e-12 | 59 |
monocyte | 3.60e-12 | 59 |
monoblast | 3.60e-12 | 59 |
promonocyte | 3.60e-12 | 59 |
endothelial cell of artery | 5.69e-12 | 9 |
macrophage dendritic cell progenitor | 1.14e-11 | 61 |
blood vessel endothelial cell | 6.00e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.00e-11 | 18 |
myeloid lineage restricted progenitor cell | 1.48e-10 | 66 |
granulocyte monocyte progenitor cell | 2.36e-10 | 67 |
thoracic aorta endothelial cell | 7.24e-10 | 2 |
myeloid leukocyte | 2.01e-09 | 72 |
glomerular endothelial cell | 1.23e-08 | 5 |
mesodermal cell | 1.42e-08 | 121 |
aortic endothelial cell | 3.19e-07 | 6 |