FFCP PHASE1:Hg19::chr19:49142301..49142354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49142301..49142354,- | |||
|description=CAGE_peak_at_chr19:49142301..49142354,- | |description=CAGE_peak_at_chr19:49142301..49142354,- | ||
|id=chr19:49142301..49142354,- | |id=chr19:49142301..49142354,- | ||
|ontology_enrichment_celltype=CL:0000037!5.87e-31!172;CL:0000566!5.87e-31!172;CL:0000988!1.90e-28!182;CL:0002032!2.70e-28!165;CL:0000837!2.70e-28!165;CL:0000763!1.13e-25!112;CL:0000049!1.13e-25!112;CL:0000738!3.48e-21!140;CL:0002087!6.43e-21!119;CL:0002009!1.20e-19!65;CL:0002031!1.39e-19!124;CL:0000557!6.01e-19!71;CL:0002194!6.24e-19!63;CL:0000576!6.24e-19!63;CL:0000040!6.24e-19!63;CL:0000559!6.24e-19!63;CL:0002057!6.54e-18!42;CL:0000839!1.33e-17!70;CL:0000766!2.68e-17!76;CL:0000860!6.48e-16!45 | |ontology_enrichment_celltype=CL:0000037!5.87e-31!172;CL:0000566!5.87e-31!172;CL:0000988!1.90e-28!182;CL:0002032!2.70e-28!165;CL:0000837!2.70e-28!165;CL:0000763!1.13e-25!112;CL:0000049!1.13e-25!112;CL:0000738!3.48e-21!140;CL:0002087!6.43e-21!119;CL:0002009!1.20e-19!65;CL:0002031!1.39e-19!124;CL:0000557!6.01e-19!71;CL:0002194!6.24e-19!63;CL:0000576!6.24e-19!63;CL:0000040!6.24e-19!63;CL:0000559!6.24e-19!63;CL:0002057!6.54e-18!42;CL:0000839!1.33e-17!70;CL:0000766!2.68e-17!76;CL:0000860!6.48e-16!45 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.45e-14;48!CL:0000473;1.60e-12;39!CL:0000234;1.60e-12;39!CL:0000860;9.36e-12;33!CL:0002057;9.36e-12;33!CL:0000763;8.08e-11;100!CL:0000766;5.92e-10;69!CL:0002322;4.57e-08;5!CL:0000039;2.64e-07;7!CL:0000586;2.64e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.24e-31,108;CL:0000049,2.24e-31,108;CL:0000037,8.47e-29,168;CL:0002032,7.49e-27,161;CL:0000837,7.49e-27,161;CL:0000988,4.87e-26,177;CL:0002009,2.71e-24,61;CL:0002194,6.40e-24,59;CL:0000576,6.40e-24,59;CL:0000040,6.40e-24,59;CL:0000559,6.40e-24,59;CL:0000473,1.99e-22,48;CL:0000234,1.99e-22,48;CL:0000557,4.84e-22,67;CL:0000839,4.13e-21,66;CL:0000766,2.82e-20,72;CL:0000860,5.85e-20,42;CL:0002057,5.85e-20,42;CL:0002087,1.21e-17,115;CL:0000738,5.25e-17,136;CL:0002031,3.97e-16,120;CL:0002393,2.40e-09,9;CL:0002397,2.40e-09,9;CL:0002322,4.60e-08,5;CL:0000039,2.43e-07,7;CL:0000586,2.43e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002057;5.29e-15;42!CL:0000049;3.25e-10;108 | |||
|ontology_enrichment_disease=DOID:1240!7.11e-16!39;DOID:2531!6.10e-15!51;DOID:0060083!6.10e-15!51;DOID:8692!9.07e-14!31;DOID:0050686!1.60e-07!137 | |ontology_enrichment_disease=DOID:1240!7.11e-16!39;DOID:2531!6.10e-15!51;DOID:0060083!6.10e-15!51;DOID:8692!9.07e-14!31;DOID:0050686!1.60e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.65e-17;31!DOID:1240;3.76e-14;39!DOID:2531;1.59e-10;51!DOID:0060083;1.59e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.59e-19,39;DOID:8692,6.33e-18,31;DOID:2531,8.83e-17,51;DOID:0060083,8.83e-17,51;DOID:0050686,3.75e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.91e-15!102;UBERON:0003061!1.91e-15!102;UBERON:0002371!7.71e-15!80;UBERON:0001474!1.40e-13!86;UBERON:0002193!3.23e-13!112;UBERON:0007023!2.01e-12!115;UBERON:0001049!3.27e-12!57;UBERON:0005068!3.27e-12!57;UBERON:0006241!3.27e-12!57;UBERON:0007135!3.27e-12!57;UBERON:0004765!4.12e-11!101;UBERON:0001434!4.12e-11!101;UBERON:0001017!7.20e-10!82;UBERON:0005743!1.77e-09!86;UBERON:0002405!2.61e-09!115;UBERON:0002616!3.62e-09!59;UBERON:0002780!4.77e-09!41;UBERON:0001890!4.77e-09!41;UBERON:0006240!4.77e-09!41;UBERON:0002346!1.43e-08!90;UBERON:0003080!1.58e-08!42;UBERON:0002020!1.69e-08!34;UBERON:0003528!1.69e-08!34;UBERON:0001893!2.88e-08!34;UBERON:0000955!3.19e-08!69;UBERON:0006238!3.19e-08!69;UBERON:0000073!3.56e-08!94;UBERON:0001016!3.56e-08!94;UBERON:0002791!6.92e-08!33;UBERON:0001869!6.93e-08!32;UBERON:0003075!7.02e-08!86;UBERON:0007284!7.02e-08!86;UBERON:0002619!2.25e-07!22 | |ontology_enrichment_uberon=UBERON:0002390!1.91e-15!102;UBERON:0003061!1.91e-15!102;UBERON:0002371!7.71e-15!80;UBERON:0001474!1.40e-13!86;UBERON:0002193!3.23e-13!112;UBERON:0007023!2.01e-12!115;UBERON:0001049!3.27e-12!57;UBERON:0005068!3.27e-12!57;UBERON:0006241!3.27e-12!57;UBERON:0007135!3.27e-12!57;UBERON:0004765!4.12e-11!101;UBERON:0001434!4.12e-11!101;UBERON:0001017!7.20e-10!82;UBERON:0005743!1.77e-09!86;UBERON:0002405!2.61e-09!115;UBERON:0002616!3.62e-09!59;UBERON:0002780!4.77e-09!41;UBERON:0001890!4.77e-09!41;UBERON:0006240!4.77e-09!41;UBERON:0002346!1.43e-08!90;UBERON:0003080!1.58e-08!42;UBERON:0002020!1.69e-08!34;UBERON:0003528!1.69e-08!34;UBERON:0001893!2.88e-08!34;UBERON:0000955!3.19e-08!69;UBERON:0006238!3.19e-08!69;UBERON:0000073!3.56e-08!94;UBERON:0001016!3.56e-08!94;UBERON:0002791!6.92e-08!33;UBERON:0001869!6.93e-08!32;UBERON:0003075!7.02e-08!86;UBERON:0007284!7.02e-08!86;UBERON:0002619!2.25e-07!22 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p@chr19:49142301..49142354,- | |short_description=p@chr19:49142301..49142354,- | ||
}} | }} |
Latest revision as of 15:47, 27 July 2015
Short description: | p@chr19:49142301..49142354, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49142301..49142354, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.24e-31 | 108 |
common myeloid progenitor | 2.24e-31 | 108 |
hematopoietic stem cell | 8.47e-29 | 168 |
hematopoietic oligopotent progenitor cell | 7.49e-27 | 161 |
hematopoietic multipotent progenitor cell | 7.49e-27 | 161 |
hematopoietic cell | 4.87e-26 | 177 |
macrophage dendritic cell progenitor | 2.71e-24 | 61 |
monopoietic cell | 6.40e-24 | 59 |
monocyte | 6.40e-24 | 59 |
monoblast | 6.40e-24 | 59 |
promonocyte | 6.40e-24 | 59 |
defensive cell | 1.99e-22 | 48 |
phagocyte | 1.99e-22 | 48 |
granulocyte monocyte progenitor cell | 4.84e-22 | 67 |
myeloid lineage restricted progenitor cell | 4.13e-21 | 66 |
myeloid leukocyte | 2.82e-20 | 72 |
classical monocyte | 5.85e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.85e-20 | 42 |
nongranular leukocyte | 1.21e-17 | 115 |
leukocyte | 5.25e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 3.97e-16 | 120 |
intermediate monocyte | 2.40e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.40e-09 | 9 |
embryonic stem cell | 4.60e-08 | 5 |
germ line cell | 2.43e-07 | 7 |
germ cell | 2.43e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.13e-19 | 76 |
bone element | 6.87e-18 | 82 |
skeletal element | 4.21e-15 | 90 |
hematopoietic system | 3.93e-14 | 98 |
blood island | 3.93e-14 | 98 |
immune system | 4.15e-14 | 93 |
skeletal system | 5.42e-13 | 100 |
hemolymphoid system | 1.93e-12 | 108 |
neural tube | 2.65e-07 | 56 |
neural rod | 2.65e-07 | 56 |
future spinal cord | 2.65e-07 | 56 |
neural keel | 2.65e-07 | 56 |
central nervous system | 7.61e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.59e-19 | 39 |
myeloid leukemia | 6.33e-18 | 31 |
hematologic cancer | 8.83e-17 | 51 |
immune system cancer | 8.83e-17 | 51 |
organ system cancer | 3.75e-07 | 137 |