FFCP PHASE1:Hg19::chr12:2162419..2162431,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:2162419..2162431,+
|short_description=p5@CACNA1C
|description=CAGE_peak_5_at_CACNA1C_5end
|association_with_transcript=3bp_to_NM_000719,NM_001129827,NM_00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=775 | |EntrezGene=775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1390 | |HGNC=1390 | ||
|TSSclassifier=strong | |||
|UniProt=Q13936,E9PDJ1,E9PDJ0 | |UniProt=Q13936,E9PDJ1,E9PDJ0 | ||
|association_with_transcript=3bp_to_NM_000719,NM_001129827,NM_001129829,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129838,NM_001129839,NM_001129840,NM_001129841,NM_001129842,NM_001129843,NM_001129844,NM_001129846,NM_001167623,NM_001167624,NM_001167625,NM_199460,uc001qjz.2,uc001qkb.2,uc001qkc.2,uc001qkd.2,uc001qke.2,uc001qkf.2,uc001qkg.2,uc001qkh.2,uc001qkl.2,uc001qkn.2,uc001qko.2,uc001qkp.2,uc001qkq.2,uc001qkr.2,uc001qks.2,uc001qkt.2,uc001qku.2,uc009zdu.1,uc009zdv.1,uc009zdw.1_5end | |||
|cluster_id=chr12:2162419..2162431,+ | |||
|coexpression_cluster_id=C3266 | |||
|description=CAGE_peak_5_at_CACNA1C_5end | |||
|id=chr12:2162419..2162431,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.54e-08!75;CL:0002620!3.95e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000197;4.92e-08;6!CL:0000098;4.92e-08;6!CL:0002167;4.92e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.25e-08,6;CL:0000098,3.25e-08,6;CL:0002167,3.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.90e-07;4!UBERON:0007284;2.90e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.98e-27!57;UBERON:0005068!6.98e-27!57;UBERON:0006241!6.98e-27!57;UBERON:0007135!6.98e-27!57;UBERON:0007023!2.51e-26!115;UBERON:0002616!8.51e-24!59;UBERON:0002020!1.72e-22!34;UBERON:0003528!1.72e-22!34;UBERON:0001869!1.61e-21!32;UBERON:0000955!2.16e-21!69;UBERON:0006238!2.16e-21!69;UBERON:0001893!5.49e-21!34;UBERON:0002780!7.70e-21!41;UBERON:0001890!7.70e-21!41;UBERON:0006240!7.70e-21!41;UBERON:0001017!1.60e-20!82;UBERON:0002791!1.96e-20!33;UBERON:0003080!5.11e-20!42;UBERON:0002619!5.66e-20!22;UBERON:0005743!9.47e-20!86;UBERON:0003075!3.06e-19!86;UBERON:0007284!3.06e-19!86;UBERON:0002346!6.50e-19!90;UBERON:0001950!2.80e-18!20;UBERON:0000073!4.90e-18!94;UBERON:0001016!4.90e-18!94;UBERON:0000956!1.15e-17!25;UBERON:0000203!1.15e-17!25;UBERON:0000033!1.28e-14!123;UBERON:0000153!1.43e-13!129;UBERON:0007811!1.43e-13!129;UBERON:0000475!7.15e-13!365;UBERON:0000924!1.43e-12!173;UBERON:0006601!1.43e-12!173;UBERON:0004121!1.53e-12!169;UBERON:0003056!8.87e-11!61;UBERON:0001871!2.76e-08!7;UBERON:0000064!3.46e-08!219;UBERON:0003076!5.10e-08!15;UBERON:0003057!5.10e-08!15;UBERON:0000468!9.32e-08!659;UBERON:0004733!9.69e-08!12;UBERON:0002028!9.69e-08!12;UBERON:0007277!9.69e-08!12;UBERON:0000062!5.17e-07!511;UBERON:0004732!7.03e-07!13;UBERON:0002420!7.05e-07!9;UBERON:0007245!7.05e-07!9;UBERON:0010009!7.05e-07!9;UBERON:0010011!7.05e-07!9;UBERON:0000454!7.05e-07!9;UBERON:0004457!7.32e-07!12;UBERON:0000042!7.32e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.55e-28;22!UBERON:0000956;1.92e-24;25!UBERON:0000203;1.92e-24;25!UBERON:0001950;1.05e-23;20!UBERON:0002791;5.07e-17;32!UBERON:0001869;5.56e-17;32!UBERON:0003528;1.11e-14;34!UBERON:0002020;1.11e-14;34!UBERON:0001893;1.93e-14;34!UBERON:0001871;3.89e-14;6!UBERON:0002780;1.18e-12;41!UBERON:0001890;1.18e-12;41!UBERON:0002021;1.21e-09;5!UBERON:0000073;2.92e-08;53!UBERON:0002616;2.92e-08;53!UBERON:0000200;4.92e-08;6!UBERON:0004457;1.07e-07;9!UBERON:0000042;1.07e-07;9!UBERON:0002702;4.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.40e-28,22;UBERON:0000956,1.36e-24,25;UBERON:0000203,1.36e-24,25;UBERON:0001950,6.53e-24,20;UBERON:0002791,1.69e-18,32;UBERON:0001869,1.69e-18,32;UBERON:0003528,3.30e-17,34;UBERON:0002020,3.30e-17,34;UBERON:0001893,3.30e-17,34;UBERON:0002780,9.75e-16,41;UBERON:0001890,9.75e-16,41;UBERON:0003080,9.75e-16,41;UBERON:0006240,9.75e-16,41;UBERON:0000073,1.52e-14,53;UBERON:0002616,1.52e-14,53;UBERON:0001871,2.49e-14,6;UBERON:0003075,1.10e-13,82;UBERON:0007284,1.10e-13,82;UBERON:0001049,1.59e-13,56;UBERON:0005068,1.59e-13,56;UBERON:0006241,1.59e-13,56;UBERON:0007135,1.59e-13,56;UBERON:0002346,8.88e-13,86;UBERON:0007023,7.49e-12,114;UBERON:0010371,1.00e-11,104;UBERON:0010314,1.42e-11,132;UBERON:0000955,1.67e-11,68;UBERON:0006238,1.67e-11,68;UBERON:0003056,1.37e-10,61;UBERON:0002021,1.45e-09,5;UBERON:0001017,6.07e-09,81;UBERON:0000200,4.15e-08,6;UBERON:0001016,1.30e-07,89;UBERON:0002771,6.08e-07,2;UBERON:0002702,7.04e-07,2;UBERON:0005253,7.47e-07,2 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,1.0007329835313,1.34088328328186,1.74467704820074,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.724232594804119,0,0.486634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0.149448680551801,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0.438977620880838,1.22595118319608,1.20190447125277,0,1.07633781413317,1.06778694409284,0,1.50045548042201,0.515262646192195,0.772921620136887,0.18611685633159,0.506328996723799,0.584622030967192,1.7670364197088,1.19664868234989,2.42469085228218,0,0.201504196455281,0.508681776931463,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,1.96271887676878,2.68094105557689,1.17141414992713,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,1.2276957863045,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.348631135379878,0,0,0,0.229628896329213,0,0.524497659837696,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0.924291702687866,0.307007349452259,0.137836572484531,0.429680979473094,0.725083469571143,0.170453254832202,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0,0.532306030317022,1.73986598415015,0.37064843820784,0,0,0,0,0,0,0.636406495851874,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0.409499734223957,0,1.13008116620243,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,1.68886108238131,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,1.68803299692615,0,0,0.422250816255987,1.79323189425963,1.10513566212459,0.755798243562828,0,0,0.622079175323615,0,0,0,0.789147245095469,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,1.38899995946634,0.885741385813839,0.964771509003264,1.52581736317083,1.43753037910592,0.295547618953547,0.219385397153973,0,0,1.76985594558733,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.530745387020035,2.4441205797345,0,0,0,0,0,0.468528891450678,0,0,0,1.18375320854817,1.20990716048664,1.53036380815245,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.50648636764703,0,0,0.85381197895741,0,0,0,0,0,0,0,0.271808412147228,0,0.407992870545287,0,0.600420288709789,0.410716136675979,0,0,0.262887354279314,0.837847203816763,1.3749625440701,2.87149209830726,0.599037001496973,1.28767814440971,0,1.00775208730089,0.720599767084807,0,0,0,0,0,0,1.59045937961861,1.0896272488926,0,0.137539436597234,0.83088067605837,0,0,0.91124334987037,0,0.0788057072991982,0.577000469484979,0,0,0,0,0,0.25426853765475,0.542999601753713,0.864221491201268,0,0,0,1.02232813071253,0.113312091520126,0,0,0.387848869084652,0.66116300871345,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,2.65820453990096,1.34228891392159,1.1267183763585,0.573409195690071,0.665574309221114,0.248385611765534,0,0,0,0,0,0,0.434763085832475,0.447764408660622,0.233713309847224,0,1.13641803165053,1.0062716070103,0,0.228840068396924,0.302461847526478,0,0.591420599958536,0.318593534327405,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0.322231671127465,0,0.398095888698616,0,0.343395705182793,0,0,0.385239660814607,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0.215649622793364,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,1.05802783107205,0,0.321146125482298,1.41696576325585,2.39450788585727,1.64093091392604,1.00828678488687,0.829887029570615,3.06803726700517,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0.150420656698515,0.40341013740704,0,0,0.163771917510097,0,0.540300676947157,0.781078098613847,1.65349437200947,0.634158101939068,1.640924427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| ||
|short_description=p5@CACNA1C | |||
}} | }} |
Latest revision as of 19:30, 17 September 2015
Short description: | p5@CACNA1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CACNA1C_5end |
Coexpression cluster: | C3266_uterus_aorta_smooth_colon_Olfactory_Fibroblast_dura |
Association with transcript: | 3bp_to_NM_000719, NM_001129827, NM_001129829, NM_001129830, NM_001129831, NM_001129832, NM_001129833, NM_001129834, NM_001129835, NM_001129836, NM_001129837, NM_001129838, NM_001129839, NM_001129840, NM_001129841, NM_001129842, NM_001129843, NM_001129844, NM_001129846, NM_001167623, NM_001167624, NM_001167625, NM_199460, uc001qjz.2, uc001qkb.2, uc001qkc.2, uc001qkd.2, uc001qke.2, uc001qkf.2, uc001qkg.2, uc001qkh.2, uc001qkl.2, uc001qkn.2, uc001qko.2, uc001qkp.2, uc001qkq.2, uc001qkr.2, uc001qks.2, uc001qkt.2, uc001qku.2, uc009zdu.1, uc009zdv.1, uc009zdw.1_5end |
EntrezGene: | CACNA1C |
HGNC: | 1390 |
UniProt: | Q13936E9PDJ1E9PDJ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.25e-08 | 6 |
sensory epithelial cell | 3.25e-08 | 6 |
olfactory epithelial cell | 3.25e-08 | 6 |