FFCP PHASE1:Hg19::chr3:45266356..45266376,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:45266356..45266376,- | |||
|description=CAGE_peak_at_chr3:45266356..45266376,- | |description=CAGE_peak_at_chr3:45266356..45266376,- | ||
|id=chr3:45266356..45266376,- | |id=chr3:45266356..45266376,- | ||
|ontology_enrichment_celltype=CL:0000055!2.43e-19!180;CL:0000393!2.45e-18!60;CL:0000211!2.45e-18!60;CL:0000680!1.14e-15!57;CL:0000056!1.14e-15!57;CL:0000355!1.14e-15!57;CL:0000187!3.26e-15!54;CL:0000192!4.66e-14!42;CL:0000514!4.66e-14!42;CL:0000183!6.41e-13!59;CL:0000359!1.54e-12!32;CL:0002539!4.04e-09!10;CL:0000048!1.21e-07!430;CL:0000034!1.22e-07!444;CL:0000723!2.18e-07!436;CL:0002595!4.43e-07!5;CL:0000057!9.63e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.43e-19!180;CL:0000393!2.45e-18!60;CL:0000211!2.45e-18!60;CL:0000680!1.14e-15!57;CL:0000056!1.14e-15!57;CL:0000355!1.14e-15!57;CL:0000187!3.26e-15!54;CL:0000192!4.66e-14!42;CL:0000514!4.66e-14!42;CL:0000183!6.41e-13!59;CL:0000359!1.54e-12!32;CL:0002539!4.04e-09!10;CL:0000048!1.21e-07!430;CL:0000034!1.22e-07!444;CL:0000723!2.18e-07!436;CL:0002595!4.43e-07!5;CL:0000057!9.63e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.25e-24;32!CL:0002595;8.90e-21;5!CL:0002539;2.00e-18;10!CL:0000192;3.18e-17;43!CL:0002559;3.09e-13;5!CL:0000346;3.89e-13;3!CL:1000428;3.89e-13;3!CL:0002593;9.09e-10;2!CL:0000187;9.53e-10;55!CL:0000393;1.49e-08;61!CL:0000211;1.49e-08;61!CL:0000134;1.50e-07;55!CL:0000723;1.81e-07;61!CL:0000048;2.01e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.00e-24,32;CL:0002595,1.07e-20,5;CL:0000192,3.61e-20,43;CL:0000514,3.61e-20,43;CL:0002539,1.61e-18,10;CL:0000393,3.57e-17,61;CL:0000211,3.57e-17,61;CL:0000187,6.10e-15,55;CL:0000680,5.65e-14,58;CL:0000056,5.65e-14,58;CL:0000355,5.65e-14,58;CL:0002559,2.44e-13,5;CL:0000346,2.99e-13,3;CL:1000428,2.99e-13,3;CL:0002593,9.30e-10,2;CL:0000048,1.24e-08,427;CL:0000723,2.22e-08,433;CL:0000034,4.67e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000514;3.18e-17;43!CL:0000355;1.36e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!4.26e-13!14;DOID:120!1.98e-07!27;DOID:193!2.60e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.38e-21;14!DOID:0060084;6.14e-14;3!DOID:127;6.14e-14;3!DOID:0060072;1.48e-10;4!DOID:120;3.70e-10;27!DOID:193;2.39e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.93e-21,14;DOID:0060084,6.16e-14,3;DOID:127,6.16e-14,3;DOID:0060072,1.49e-10,4;DOID:120,3.05e-10,27;DOID:193,1.99e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0004290!6.02e-18!70;UBERON:0000486!2.56e-16!82;UBERON:0000914!6.99e-16!83;UBERON:0002329!6.99e-16!83;UBERON:0003077!6.99e-16!83;UBERON:0003059!6.99e-16!83;UBERON:0007282!6.99e-16!83;UBERON:0009618!6.99e-16!83;UBERON:0007285!6.99e-16!83;UBERON:0001134!8.02e-14!61;UBERON:0002036!8.02e-14!61;UBERON:0003082!8.02e-14!61;UBERON:0001637!1.93e-13!42;UBERON:0003509!1.93e-13!42;UBERON:0004572!1.93e-13!42;UBERON:0002385!5.37e-13!63;UBERON:0001015!5.37e-13!63;UBERON:0000383!5.37e-13!63;UBERON:0004573!1.43e-11!33;UBERON:0004571!1.43e-11!33;UBERON:0004237!4.04e-09!10;UBERON:0004695!4.04e-09!10;UBERON:0002111!4.04e-09!10;UBERON:0004178!4.04e-09!10;UBERON:0001135!1.25e-07!15;UBERON:0005256!1.63e-07!143;UBERON:0001981!2.39e-07!60;UBERON:0007500!2.39e-07!60;UBERON:0004537!2.39e-07!60;UBERON:0006965!2.39e-07!60;UBERON:0000947!2.43e-07!21;UBERON:0010191!2.43e-07!21;UBERON:0003834!4.43e-07!5;UBERON:0001533!4.43e-07!5;UBERON:0005156!5.94e-07!59;UBERON:0000990!5.94e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;8.90e-21;5!UBERON:0001533;8.90e-21;5!UBERON:0004237;2.00e-18;10!UBERON:0004695;2.00e-18;10!UBERON:0002111;2.00e-18;10!UBERON:0004178;2.00e-18;10!UBERON:0004573;7.16e-18;33!UBERON:0004571;7.16e-18;33!UBERON:0003513;9.26e-15;7!UBERON:0002073;3.09e-13;5!UBERON:0001637;3.59e-13;42!UBERON:0003509;3.59e-13;42!UBERON:0004572;3.59e-13;42!UBERON:0000412;3.89e-13;3!UBERON:0001992;3.89e-13;3!UBERON:0001135;5.77e-12;15!UBERON:0002067;3.17e-11;9!UBERON:0002456;9.09e-10;2!UBERON:0000947;2.84e-08;21!UBERON:0010191;2.84e-08;21!UBERON:0002118;1.61e-07;5!UBERON:0000992;2.48e-07;13!UBERON:0003134;3.24e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,8.52e-21,33;UBERON:0004571,8.52e-21,33;UBERON:0003834,1.07e-20,5;UBERON:0001533,1.07e-20,5;UBERON:0002329,6.21e-20,71;UBERON:0003059,6.21e-20,71;UBERON:0007282,6.21e-20,71;UBERON:0004290,6.21e-20,71;UBERON:0009618,6.21e-20,71;UBERON:0003077,1.39e-19,72;UBERON:0007285,1.39e-19,72;UBERON:0007524,3.03e-19,73;UBERON:0004237,1.61e-18,10;UBERON:0004695,1.61e-18,10;UBERON:0002111,1.61e-18,10;UBERON:0004178,1.61e-18,10;UBERON:0001637,5.39e-18,42;UBERON:0003509,5.39e-18,42;UBERON:0004572,5.39e-18,42;UBERON:0007503,1.11e-17,78;UBERON:0000486,2.62e-16,83;UBERON:0003513,1.06e-14,7;UBERON:0002073,2.44e-13,5;UBERON:0005086,2.44e-13,5;UBERON:0000412,2.99e-13,3;UBERON:0001992,2.99e-13,3;UBERON:0001134,7.81e-13,62;UBERON:0002036,7.81e-13,62;UBERON:0003082,7.81e-13,62;UBERON:0002385,2.56e-12,64;UBERON:0001015,2.56e-12,64;UBERON:0000383,2.56e-12,64;UBERON:0001135,5.03e-12,15;UBERON:0007500,8.15e-12,59;UBERON:0001981,8.15e-12,59;UBERON:0004537,8.15e-12,59;UBERON:0006965,8.15e-12,59;UBERON:0002067,2.67e-11,9;UBERON:0004016,2.67e-11,9;UBERON:0010083,2.67e-11,9;UBERON:0004872,7.07e-10,83;UBERON:0000055,8.26e-10,68;UBERON:0002456,9.30e-10,2;UBERON:0005256,1.64e-09,122;UBERON:0000947,2.59e-08,21;UBERON:0010191,2.59e-08,21;UBERON:0002049,3.90e-08,78;UBERON:0007798,3.90e-08,78;UBERON:0002118,1.24e-07,5;UBERON:0004535,1.27e-07,109;UBERON:0000926,1.57e-07,315;UBERON:0004120,1.57e-07,315;UBERON:0006603,1.57e-07,315;UBERON:0003134,2.07e-07,37;UBERON:0000474,2.07e-07,37;UBERON:0000992,2.24e-07,13;UBERON:0001009,2.57e-07,112;UBERON:0000490,5.07e-07,148 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,1.26343974685366,0,0.245733936501509,0,0,0,0,0,2.6893005858071,0.602694528023977,8.03341099426111,1.95173119516203,0,0.204000691244253,0.313454721478088,0.286235987131057,0.958120975510189,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0,0.302714855289863,0,0,4.37024107562449,0,1.49448680551801,0.822041490506354,0,0.140450806702248,0,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0.635795703478686,0,0.412210116953756,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0.302256294682921,0,0,0,0,0.243947412259191,0.265059536642971,0.232387885739037,0,0,0.36497735907583,7.8224766164908,2.57296375277154,2.76269842704961,0.464367928031979,1.44375896333917,0,0,0.241011029883482,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,1.01637849688985,0,5.41302168944387,0.670065061337395,8.93114252314428,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0.234282829985426,0,2.27407504055985,0,0,0.184369168541703,1.04260337361699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96836132889982,0.925258162815933,1.59805552781814,0.739144404124282,2.07701771673448,2.5566283261191,0,0,0,0.459257792658427,0.546273504020151,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0.328014645699706,0,0,0,0,0,0,0,0.676695028044854,0.308097234229289,0.15350367472613,0.275673144969061,0.322260734604821,0.435050081742686,0,0.178064071293475,0,0,0,0,1.39453664789186,0.62962469366128,1.3940745403212,2.7723022215848,1.06461206063404,0,2.40921484835096,0,0,0,0.190630193923825,0.255897791311334,0,0.318203247925937,3.13979456079692,0,0.274537029736055,0.471249609382746,0,0,0,0,7.7988316682011,11.6215161432431,0.272999822815972,0.848432591722276,0,1.10273068709225,2.65375590096488,4.38450885253763,0,0,0.811641507850816,0.30982349809975,1.12678241012897,0,0,0.35667105148125,3.54761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0.295547618953547,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.366390373607449,0,0,0,0,0,0.588187602953219,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0.34945333648406,0.687944129886466,0,0,0,0,0,0.225980740780532,0.822251547880505,0.19871461170299,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,16.8329876543651,8.64221491201268,13.7166691245952,0,0,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0.570930667089935,0.705797459094515,0,0,0.597019211547496,0.467426619694449,0.554805861502613,1.7046270474758,0.251567901752575,0,0.915360273587694,1.20984739010591,0.466311601748341,2.51353754982378,3.02663857611035,0.899606224327209,0.931577741257556,1.24411862352257,2.92425886013794,2.08698024724694,1.80309130796662,1.52322084867518,0.813741466409323,1.81848659202559,0.859284456339908,1.85613503951397,2.3885753321917,0.400027764663154,0.686791410365586,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0.206686796501184,0,2.18789923607288,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350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| ||
|short_description=p@chr3:45266356..45266376,- | |short_description=p@chr3:45266356..45266376,- | ||
}} | }} |
Latest revision as of 21:15, 29 July 2015
Short description: | p@chr3:45266356..45266376, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:45266356..45266376, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.00e-24 | 32 |
smooth muscle cell of the subclavian artery | 1.07e-20 | 5 |
smooth muscle cell | 3.61e-20 | 43 |
smooth muscle myoblast | 3.61e-20 | 43 |
aortic smooth muscle cell | 1.61e-18 | 10 |
electrically responsive cell | 3.57e-17 | 61 |
electrically active cell | 3.57e-17 | 61 |
muscle cell | 6.10e-15 | 55 |
muscle precursor cell | 5.65e-14 | 58 |
myoblast | 5.65e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.65e-14 | 58 |
hair follicle cell | 2.44e-13 | 5 |
hair follicle dermal papilla cell | 2.99e-13 | 3 |
stem cell of epidermis | 2.99e-13 | 3 |
smooth muscle cell of the internal thoracic artery | 9.30e-10 | 2 |
multi fate stem cell | 1.24e-08 | 427 |
somatic stem cell | 2.22e-08 | 433 |
stem cell | 4.67e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.93e-21 | 14 |
cell type benign neoplasm | 6.16e-14 | 3 |
leiomyoma | 6.16e-14 | 3 |
benign neoplasm | 1.49e-10 | 4 |
female reproductive organ cancer | 3.05e-10 | 27 |
reproductive organ cancer | 1.99e-09 | 29 |