FFCP PHASE1:Hg19::chr3:52029958..52029974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6159 | |EntrezGene=6159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10331 | |HGNC=10331 | ||
|TSSclassifier=strong | |||
|UniProt=P47914 | |UniProt=P47914 | ||
|association_with_transcript=0bp_to_ENST00000294189,NM_000992,uc003dcs.2_5end | |association_with_transcript=0bp_to_ENST00000294189,NM_000992,uc003dcs.2_5end | ||
|cluster_id=chr3:52029958..52029974,- | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_2_at_RPL29_5end | |description=CAGE_peak_2_at_RPL29_5end | ||
|id=chr3:52029958..52029974,- | |id=chr3:52029958..52029974,- | ||
|ontology_enrichment_celltype=CL:0002321!7.23e-34!248;CL:0000220!3.69e-33!246;CL:0000548!2.48e-32!679;CL:0000004!2.48e-32!679;CL:0000255!2.48e-32!679;CL:0000012!5.08e-32!682;CL:0000066!4.84e-27!254;CL:0000144!1.51e-22!625;CL:0000222!1.43e-21!119;CL:0002371!1.43e-17!591;CL:0000003!2.24e-17!722;CL:0000055!3.91e-15!180;CL:0000680!1.86e-12!57;CL:0000056!1.86e-12!57;CL:0000355!1.86e-12!57;CL:0000183!2.27e-12!59;CL:0000393!2.60e-12!60;CL:0000211!2.60e-12!60;CL:0000187!1.05e-11!54;CL:0000192!1.91e-10!42;CL:0000514!1.91e-10!42;CL:0000063!3.10e-10!578;CL:0000076!2.37e-09!62;CL:0000213!2.83e-09!57;CL:0000215!2.83e-09!57;CL:0000359!6.99e-09!32;CL:0000115!8.17e-09!35;CL:0000071!1.29e-08!18;CL:0002546!1.29e-08!18;CL:0002078!2.04e-08!44;CL:0002139!2.62e-08!24;CL:0000223!9.21e-07!59 | |ontology_enrichment_celltype=CL:0002321!7.23e-34!248;CL:0000220!3.69e-33!246;CL:0000548!2.48e-32!679;CL:0000004!2.48e-32!679;CL:0000255!2.48e-32!679;CL:0000012!5.08e-32!682;CL:0000066!4.84e-27!254;CL:0000144!1.51e-22!625;CL:0000222!1.43e-21!119;CL:0002371!1.43e-17!591;CL:0000003!2.24e-17!722;CL:0000055!3.91e-15!180;CL:0000680!1.86e-12!57;CL:0000056!1.86e-12!57;CL:0000355!1.86e-12!57;CL:0000183!2.27e-12!59;CL:0000393!2.60e-12!60;CL:0000211!2.60e-12!60;CL:0000187!1.05e-11!54;CL:0000192!1.91e-10!42;CL:0000514!1.91e-10!42;CL:0000063!3.10e-10!578;CL:0000076!2.37e-09!62;CL:0000213!2.83e-09!57;CL:0000215!2.83e-09!57;CL:0000359!6.99e-09!32;CL:0000115!8.17e-09!35;CL:0000071!1.29e-08!18;CL:0002546!1.29e-08!18;CL:0002078!2.04e-08!44;CL:0002139!2.62e-08!24;CL:0000223!9.21e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.27e-08;18!CL:0000359;2.06e-08;32!CL:0002139;2.49e-08;24!CL:0000115;3.73e-08;36!CL:0000192;1.61e-07;43!CL:0000187;2.53e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.80e-34,250;CL:0000066,3.50e-27,253;CL:0000222,7.04e-22,121;CL:0000680,3.43e-12,58;CL:0000056,3.43e-12,58;CL:0000355,3.43e-12,58;CL:0000393,4.65e-12,61;CL:0000211,4.65e-12,61;CL:0000187,1.91e-11,55;CL:0000192,3.73e-10,43;CL:0000514,3.73e-10,43;CL:0000213,9.53e-10,58;CL:0000215,9.53e-10,58;CL:0000076,1.08e-09,63;CL:0000115,2.40e-09,36;CL:0002078,6.60e-09,45;CL:0000359,6.98e-09,32;CL:0000071,1.29e-08,18;CL:0002546,1.29e-08,18;CL:0002139,2.62e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002546;1.27e-08;18!CL:0000514;1.61e-07;43!CL:0000355;3.32e-07;58!CL:0000222;7.28e-07;121 | |||
|ontology_enrichment_disease=DOID:14566!2.72e-11!239;DOID:162!1.18e-10!235;DOID:2531!1.00e-08!51;DOID:0060083!1.00e-08!51;DOID:8692!6.49e-08!31;DOID:1240!6.99e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.20e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.71e-11,239;DOID:162,1.18e-10,235;DOID:2531,1.00e-08,51;DOID:0060083,1.00e-08,51;DOID:8692,6.49e-08,31;DOID:1240,6.98e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000490!3.06e-16!138;UBERON:0002049!7.72e-15!79;UBERON:0007798!7.72e-15!79;UBERON:0003914!1.40e-14!118;UBERON:0000055!3.08e-14!69;UBERON:0003104!4.73e-14!238;UBERON:0009142!4.73e-14!238;UBERON:0000486!6.39e-14!82;UBERON:0005256!1.05e-13!143;UBERON:0002100!1.18e-13!216;UBERON:0001981!4.94e-13!60;UBERON:0007500!4.94e-13!60;UBERON:0004537!4.94e-13!60;UBERON:0006965!4.94e-13!60;UBERON:0004290!7.30e-13!70;UBERON:0001637!2.90e-12!42;UBERON:0003509!2.90e-12!42;UBERON:0004572!2.90e-12!42;UBERON:0000914!3.37e-12!83;UBERON:0002329!3.37e-12!83;UBERON:0003077!3.37e-12!83;UBERON:0003059!3.37e-12!83;UBERON:0007282!3.37e-12!83;UBERON:0009618!3.37e-12!83;UBERON:0007285!3.37e-12!83;UBERON:0001134!8.19e-11!61;UBERON:0002036!8.19e-11!61;UBERON:0003082!8.19e-11!61;UBERON:0004872!9.78e-11!84;UBERON:0002385!8.45e-10!63;UBERON:0001015!8.45e-10!63;UBERON:0000383!8.45e-10!63;UBERON:0004573!4.91e-09!33;UBERON:0004571!4.91e-09!33;UBERON:0000119!6.22e-09!312;UBERON:0004535!7.11e-09!110;UBERON:0000487!8.91e-09!22;UBERON:0001986!1.29e-08!18;UBERON:0004638!1.29e-08!18;UBERON:0004852!1.29e-08!18;UBERON:0000483!1.73e-08!309;UBERON:0001009!4.18e-08!113;UBERON:0006914!1.06e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.71e-09;42!UBERON:0003509;3.71e-09;42!UBERON:0004572;3.71e-09;42!UBERON:0003914;4.28e-09;74!UBERON:0000490;6.56e-09;33!UBERON:0007500;7.47e-09;56!UBERON:0001981;7.47e-09;56!UBERON:0004537;7.47e-09;56!UBERON:0000487;8.99e-09;22!UBERON:0004638;1.27e-08;18!UBERON:0001986;1.27e-08;18!UBERON:0004852;1.27e-08;18!UBERON:0004573;3.05e-08;33!UBERON:0004571;3.05e-08;33!UBERON:0000055;9.92e-08;65!UBERON:0006914;1.01e-07;25!UBERON:0002049;3.73e-07;75!UBERON:0007798;3.73e-07;75 | |||
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| ||
|short_description=p2@RPL29 | |short_description=p2@RPL29 | ||
}} | }} |
Latest revision as of 22:28, 18 September 2015
Short description: | p2@RPL29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL29_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000294189, NM_000992, uc003dcs.2_5end |
EntrezGene: | RPL29 |
HGNC: | 10331 |
UniProt: | P47914 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.80e-34 | 250 |
epithelial cell | 3.50e-27 | 253 |
mesodermal cell | 7.04e-22 | 121 |
muscle precursor cell | 3.43e-12 | 58 |
myoblast | 3.43e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.43e-12 | 58 |
electrically responsive cell | 4.65e-12 | 61 |
electrically active cell | 4.65e-12 | 61 |
muscle cell | 1.91e-11 | 55 |
smooth muscle cell | 3.73e-10 | 43 |
smooth muscle myoblast | 3.73e-10 | 43 |
lining cell | 9.53e-10 | 58 |
barrier cell | 9.53e-10 | 58 |
squamous epithelial cell | 1.08e-09 | 63 |
endothelial cell | 2.40e-09 | 36 |
meso-epithelial cell | 6.60e-09 | 45 |
vascular associated smooth muscle cell | 6.98e-09 | 32 |
blood vessel endothelial cell | 1.29e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.29e-08 | 18 |
endothelial cell of vascular tree | 2.62e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.71e-11 | 239 |
cancer | 1.18e-10 | 235 |
hematologic cancer | 1.00e-08 | 51 |
immune system cancer | 1.00e-08 | 51 |
myeloid leukemia | 6.49e-08 | 31 |
leukemia | 6.98e-08 | 39 |