FFCP PHASE1:Hg19::chr12:54778351..54778378,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:54778351..54778378,-
|short_description=p6@ZNF385A
|description=CAGE_peak_6_at_ZNF385A_5end
|association_with_transcript=-3bp_to_uc009zno.1_5end
|EntrezG...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25946 | |EntrezGene=25946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17521 | |HGNC=17521 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_uc009zno.1_5end | |||
|cluster_id=chr12:54778351..54778378,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_6_at_ZNF385A_5end | |||
|id=chr12:54778351..54778378,- | |||
|ontology_enrichment_celltype=CL:0002009!1.45e-54!65;CL:0002194!3.70e-53!63;CL:0000576!3.70e-53!63;CL:0000040!3.70e-53!63;CL:0000559!3.70e-53!63;CL:0000763!4.57e-50!112;CL:0000049!4.57e-50!112;CL:0000557!1.06e-49!71;CL:0000766!2.01e-47!76;CL:0002057!8.50e-47!42;CL:0000839!2.00e-45!70;CL:0000037!8.52e-43!172;CL:0000566!8.52e-43!172;CL:0000860!2.15e-42!45;CL:0000988!1.36e-39!182;CL:0002032!1.27e-38!165;CL:0000837!1.27e-38!165;CL:0000738!1.99e-37!140;CL:0002087!4.28e-36!119;CL:0002031!9.42e-32!124;CL:0002393!1.47e-11!9;CL:0002397!1.47e-11!9;CL:0000451!1.55e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.97e-57;33!CL:0002057;2.97e-57;33!CL:0000576;4.73e-56;48!CL:0000473;2.01e-55;39!CL:0000234;2.01e-55;39!CL:0000766;1.02e-38;69!CL:0000763;9.26e-24;100!CL:0002087;4.83e-17;104!CL:0000738;3.56e-13;136!CL:0002393;4.38e-13;6!CL:0002397;4.38e-13;6!CL:0000235;2.17e-10;6!CL:0000988;2.88e-10;177!CL:0000875;1.10e-07;3!CL:0002396;1.10e-07;3!CL:0000840;1.26e-07;5!CL:0000767;3.42e-07;3!CL:0000226;8.49e-07;3!CL:0000842;8.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,9.21e-103,59;CL:0000576,9.21e-103,59;CL:0000040,9.21e-103,59;CL:0000559,9.21e-103,59;CL:0002009,1.86e-102,61;CL:0000557,7.35e-95,67;CL:0000766,2.54e-91,72;CL:0000473,1.41e-90,48;CL:0000234,1.41e-90,48;CL:0000839,4.34e-90,66;CL:0000860,2.94e-81,42;CL:0002057,2.94e-81,42;CL:0000763,7.49e-79,108;CL:0000049,7.49e-79,108;CL:0002087,1.53e-61,115;CL:0000037,3.58e-61,168;CL:0000738,1.03e-58,136;CL:0000988,1.13e-58,177;CL:0002032,1.36e-55,161;CL:0000837,1.36e-55,161;CL:0002031,7.50e-54,120;CL:0002393,4.39e-19,9;CL:0002397,4.39e-19,9;CL:0000134,3.36e-18,354;CL:0002320,3.43e-18,361;CL:0000219,1.01e-14,386;CL:0000048,5.30e-12,427;CL:0000723,1.52e-11,433;CL:0000034,1.60e-11,441;CL:0000235,2.26e-10,6;CL:0000840,1.06e-07,5;CL:0001029,1.06e-07,5;CL:0000875,1.13e-07,3;CL:0002396,1.13e-07,3;CL:0000767,3.33e-07,3;CL:0000226,8.50e-07,3;CL:0000842,8.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.78e-58;42!CL:0000049;3.82e-22;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.07e-52!102;UBERON:0003061!1.07e-52!102;UBERON:0002193!1.27e-47!112;UBERON:0002371!6.84e-43!80;UBERON:0001474!3.72e-38!86;UBERON:0002405!3.23e-33!115;UBERON:0004765!7.75e-30!101;UBERON:0001434!7.75e-30!101;UBERON:0007023!4.69e-25!115;UBERON:0003081!1.26e-18!216;UBERON:0002204!1.48e-11!167;UBERON:0000178!4.77e-09!15;UBERON:0000179!4.77e-09!15;UBERON:0000463!4.77e-09!15;UBERON:0000479!3.23e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.27e-15;15!UBERON:0000179;1.27e-15;15!UBERON:0000463;1.27e-15;15!UBERON:0002390;3.55e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.89e-97,98;UBERON:0003061,1.89e-97,98;UBERON:0002193,1.65e-86,108;UBERON:0002371,2.99e-84,76;UBERON:0001474,8.79e-77,82;UBERON:0002405,3.96e-70,93;UBERON:0004765,2.30e-68,90;UBERON:0001434,1.00e-59,100;UBERON:0003081,7.48e-40,203;UBERON:0002204,9.98e-30,167;UBERON:0000926,5.58e-19,315;UBERON:0004120,5.58e-19,315;UBERON:0006603,5.58e-19,315;UBERON:0002384,8.20e-18,371;UBERON:0000178,1.02e-15,15;UBERON:0000179,1.02e-15,15;UBERON:0000463,1.02e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.2037132218685,22.2621050896383,44.896675761662,0,0,0,0,0,1.17440175733939,23.2678071583389,48.5317562877743,24.3052175201754,1.79132379391939,3.2389366601898,2.57575567634187,58.3046937506054,51.7690042853669,61.1311834193297,47.183094491854,33.7157668177897,30.041517976825,37.4000110018796,49.1828556535873,32.3980654947362,39.6457532847111,43.8929584837002,44.6907405761328,51.3901586951311,29.2009580561895,23.1465188978437,42.8517449319264,34.9812639512942,42.1962503027367,44.8597768253934,62.0331975203275,64.7861620809695,28.7307146242298,13.6172453925874,14.3249117268982,37.6872997885115,46.9334626578181,40.1799362704466,23.005181100068,27.6208226990674,21.835904733421,67.1791810471975,84.1913027861572,46.9635365938762,14.9397079424838,16.8198119982487,18.001265710073,63.5578418542984,64.2500867353061,51.1459630540975,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0,1.17447437874188,0,0,2.24203425192614,0.526768169550154,0.393419540227666,0,1.23360899399706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.903450714466637,0.895906278080929,1.24930726552346,2.13099526839615,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,3.24547393654683,7.13931922926996,7.57860374957531,1.90792499444274,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,2.94848165003288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,7.02012795417713,3.71577905721821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,1.18218456121156,0.215627574859517,1.92514554419623,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32861967686659,0,20.4700345861659,29.5528455121505,16.2225887861235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,1.52234282769651,1.52927441428475,6.26611905891579,4.04994018278241,4.52498500394814,2.59389324477087,3.24018862342869,7.13812658664843,0,0,0,0,0,0,0,0,0.383010740264733,1.05836791361941,0,0.280797178113459,1.82587743226554,0.313359791546046,2.50634477090067,1.52362600021443,1.2847046008296,2.62339619348362,0.851692475380653,0.343505344755765,3.37964840739304,2.23676107892416,2.33588798396672,0,0,1.23087398947712,0.270455678475983,0,0,0,1.31857361344705,0,0,0,0,0.890894042497916,0,0,0.281338832821026,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,4.09257896181497,0.197286811273867,7.18449277040819,0,0,1.02044907978036,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.139423744278603,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,2.82559859230266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,0.234264445725339,0,0,0,0,1.20990716048664,0,2.02197054811161,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.50648636764703,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,1.27746588066972,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,3.0952078182318,0.182248669974074,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0,0,0.58620893471233,1.32506888912221,0.517131825446202,0.26446520348538,0,0,1.06787412567695,0.157204305099666,2.07119527673598,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0.776503360757966,0.993542447062135,0,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.490696182767533,0,0,0,0,0.320075189082423,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.638535436228605,0.41023272848151,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,2.19303106742873,0.496211178389294,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0.177404740325278,0,0,0.339848664884159,0.197318320688547,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0.428859265059938,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.891139200981258,0,0,1.2217909337381,1.35361564744512,0.0999411559249289,0,0,0,0,0.458729283404541,0.286679166302903,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,0.213233981900981,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.2037132218685,22.2621050896383,44.896675761662,0,0,0,0,0,1.17440175733939,23.2678071583389,48.5317562877743,24.3052175201754,1.79132379391939,3.2389366601898,2.57575567634187,58.3046937506054,51.7690042853669,61.1311834193297,47.183094491854,33.7157668177897,30.041517976825,37.4000110018796,49.1828556535873,32.3980654947362,39.6457532847111,43.8929584837002,44.6907405761328,51.3901586951311,29.2009580561895,23.1465188978437,42.8517449319264,34.9812639512942,42.1962503027367,44.8597768253934,62.0331975203275,64.7861620809695,28.7307146242298,13.6172453925874,14.3249117268982,37.6872997885115,46.9334626578181,40.1799362704466,23.005181100068,27.6208226990674,21.835904733421,67.1791810471975,84.1913027861572,46.9635365938762,14.9397079424838,16.8198119982487,18.001265710073,63.5578418542984,64.2500867353061,51.1459630540975,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0,1.17447437874188,0,0,2.24203425192614,0.526768169550154,0.393419540227666,0,1.23360899399706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.903450714466637,0.895906278080929,1.24930726552346,2.13099526839615,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,3.24547393654683,7.13931922926996,7.57860374957531,1.90792499444274,1.71598473234038,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,2.94848165003288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96973604869918,7.02012795417713,3.71577905721821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,1.18218456121156,0.215627574859517,1.92514554419623,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32861967686659,0,20.4700345861659,29.5528455121505,16.2225887861235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,1.52234282769651,1.52927441428475,6.26611905891579,4.04994018278241,4.52498500394814,2.59389324477087,3.24018862342869,7.13812658664843,0,0,0,0,0,0,0,0,0.383010740264733,1.05836791361941,0,0.280797178113459,1.82587743226554,0.313359791546046,2.50634477090067,1.52362600021443,1.2847046008296,2.62339619348362,0.851692475380653,0.343505344755765,3.37964840739304,2.23676107892416,2.33588798396672,0,0,1.23087398947712,0.270455678475983,0,0,0,1.31857361344705,0,0,0,0,0.890894042497916,0,0,0.281338832821026,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,4.09257896181497,0.197286811273867,7.18449277040819,0,0,1.02044907978036,0,0,0.0874599999961957,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.139423744278603,0.384751292518985,0.113942055847001,0,0,0,0,0,0,0,0,2.82559859230266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,0.234264445725339,0,0,0,0,1.20990716048664,0,2.02197054811161,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.50648636764703,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,1.27746588066972,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,3.0952078182318,0.182248669974074,0,0.315222829196793,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0,0,0.58620893471233,1.32506888912221,0.517131825446202,0.26446520348538,0,0,1.06787412567695,0.157204305099666,2.07119527673598,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0.776503360757966,0.993542447062135,0,0,0,0,0,0.936669811613763,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0.132864840313363,0.490696182767533,0,0,0,0,0.320075189082423,0,0,0,0,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.638535436228605,0.41023272848151,0,0.345786262321089,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,2.19303106742873,0.496211178389294,0,0.127762427639595,0.535701835878287,0,0.606965604236632,0,0.177404740325278,0,0,0.339848664884159,0.197318320688547,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0.428859265059938,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0.891139200981258,0,0,1.2217909337381,1.35361564744512,0.0999411559249289,0,0,0,0,0.458729283404541,0.286679166302903,0,0.611923411718232,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.310298987585686,0.213233981900981,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,1.20764276154616,0 | ||
|short_description=p6@ZNF385A | |||
}} | }} |
Latest revision as of 06:08, 19 September 2015
Short description: | p6@ZNF385A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZNF385A_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -3bp_to_uc009zno.1_5end |
EntrezGene: | ZNF385A |
HGNC: | 17521 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.89e-97 | 98 |
blood island | 1.89e-97 | 98 |
hemolymphoid system | 1.65e-86 | 108 |
bone marrow | 2.99e-84 | 76 |
bone element | 8.79e-77 | 82 |
immune system | 3.96e-70 | 93 |
skeletal element | 2.30e-68 | 90 |
skeletal system | 1.00e-59 | 100 |
lateral plate mesoderm | 7.48e-40 | 203 |
musculoskeletal system | 9.98e-30 | 167 |
mesoderm | 5.58e-19 | 315 |
mesoderm-derived structure | 5.58e-19 | 315 |
presumptive mesoderm | 5.58e-19 | 315 |
connective tissue | 8.20e-18 | 371 |
blood | 1.02e-15 | 15 |
haemolymphatic fluid | 1.02e-15 | 15 |
organism substance | 1.02e-15 | 15 |