FFCP PHASE1:Hg19::chr1:170699295..170699343,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000485529_5end | |association_with_transcript=-3bp_to_ENST00000485529_5end | ||
|cluster_id=chr1:170699295..170699343,+ | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_35_at_PRRX1_5end | |description=CAGE_peak_35_at_PRRX1_5end | ||
|id=chr1:170699295..170699343,+ | |id=chr1:170699295..170699343,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.93e-16;1!UBERON:0008801;2.63e-16;1!UBERON:0010226;2.63e-16;1!UBERON:0008814;4.18e-09;2!UBERON:0010056;4.18e-09;2!UBERON:0003104;3.95e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!8.90e-09!2;UBERON:0001630!1.11e-08!2;UBERON:0005090!1.11e-08!2;UBERON:0003103!3.34e-08!69;UBERON:0003127!6.21e-08!2;UBERON:0007023!1.72e-07!115;UBERON:0007100!2.44e-07!27 | |ontology_enrichment_uberon=UBERON:0000341!8.90e-09!2;UBERON:0001630!1.11e-08!2;UBERON:0005090!1.11e-08!2;UBERON:0003103!3.34e-08!69;UBERON:0003127!6.21e-08!2;UBERON:0007023!1.72e-07!115;UBERON:0007100!2.44e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;7.93e-32;2!UBERON:0005090;1.87e-31;2!UBERON:0001630;1.87e-31;2!UBERON:0001723;9.97e-22;3!UBERON:0001033;9.97e-22;3!UBERON:0004151;5.47e-21;3!UBERON:0002426;1.04e-16;1!UBERON:0003831;1.04e-16;1!UBERON:0003898;1.04e-16;1!UBERON:0004830;1.04e-16;1!UBERON:0003830;1.04e-16;1!UBERON:0005175;1.04e-16;1!UBERON:0001774;1.04e-16;1!UBERON:0001103;1.04e-16;1!UBERON:0001389;1.41e-16;1!UBERON:0000026;1.41e-16;1!UBERON:0008784;1.41e-16;1!UBERON:0006058;1.41e-16;1!UBERON:0003663;1.41e-16;1!UBERON:0004256;1.41e-16;1!UBERON:0004708;1.41e-16;1!UBERON:0002101;1.41e-16;1!UBERON:0004709;1.41e-16;1!UBERON:0002529;1.41e-16;1!UBERON:0010538;1.41e-16;1!UBERON:0003661;1.41e-16;1!UBERON:0010890;1.41e-16;1!UBERON:0002471;1.41e-16;1!UBERON:0001383;1.41e-16;1!UBERON:0010758;1.41e-16;1!UBERON:0010707;1.41e-16;1!UBERON:0000978;1.41e-16;1!UBERON:0002103;1.41e-16;1!UBERON:0001665;1.41e-16;1!UBERON:0003823;1.41e-16;1!UBERON:0000154;1.41e-16;1!UBERON:0010709;1.41e-16;1!UBERON:0007029;1.65e-16;1!UBERON:0002079;1.93e-16;1!UBERON:0002084;2.63e-16;1!UBERON:0001831;2.63e-16;1!UBERON:0002135;2.63e-16;1!UBERON:0002082;2.63e-16;1!UBERON:0001567;2.63e-16;1!UBERON:0001134;1.04e-15;16!UBERON:0002036;1.04e-15;16!UBERON:0000974;2.69e-11;6!UBERON:0002081;6.94e-09;2!UBERON:0001829;8.09e-09;2!UBERON:0002133;8.09e-09;2!UBERON:0004089;8.09e-09;2!UBERON:0002385;1.64e-08;31!UBERON:0001015;1.64e-08;31!UBERON:0000383;1.64e-08;31!UBERON:0000948;9.71e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,7.33e-32,2;UBERON:0005090,1.87e-31,2;UBERON:0001630,1.87e-31,2;UBERON:0001723,1.05e-21,3;UBERON:0001033,1.05e-21,3;UBERON:0010056,1.05e-21,3;UBERON:0004151,5.47e-21,3;UBERON:0002426,1.04e-16,1;UBERON:0003831,1.04e-16,1;UBERON:0003898,1.04e-16,1;UBERON:0004830,1.04e-16,1;UBERON:0003830,1.04e-16,1;UBERON:0005175,1.04e-16,1;UBERON:0001774,1.04e-16,1;UBERON:0001103,1.04e-16,1;UBERON:0010084,1.04e-16,1;UBERON:0005418,1.41e-16,1;UBERON:0001389,1.41e-16,1;UBERON:0000026,1.41e-16,1;UBERON:0008784,1.41e-16,1;UBERON:0006058,1.41e-16,1;UBERON:0003663,1.41e-16,1;UBERON:0004256,1.41e-16,1;UBERON:0004708,1.41e-16,1;UBERON:0002101,1.41e-16,1;UBERON:0004709,1.41e-16,1;UBERON:0002529,1.41e-16,1;UBERON:0010538,1.41e-16,1;UBERON:0003661,1.41e-16,1;UBERON:0010890,1.41e-16,1;UBERON:0002471,1.41e-16,1;UBERON:0001383,1.41e-16,1;UBERON:0004357,1.41e-16,1;UBERON:0004347,1.41e-16,1;UBERON:0005420,1.41e-16,1;UBERON:0005732,1.41e-16,1;UBERON:0010758,1.41e-16,1;UBERON:0010707,1.41e-16,1;UBERON:0000978,1.41e-16,1;UBERON:0002103,1.41e-16,1;UBERON:0001665,1.41e-16,1;UBERON:0003823,1.41e-16,1;UBERON:0000154,1.41e-16,1;UBERON:0010709,1.41e-16,1;UBERON:0005733,1.41e-16,1;UBERON:0005730,1.41e-16,1;UBERON:0007029,1.65e-16,1;UBERON:0002079,1.93e-16,1;UBERON:0002135,2.25e-16,1;UBERON:0002084,2.63e-16,1;UBERON:0002082,2.63e-16,1;UBERON:0010226,2.63e-16,1;UBERON:0001831,3.07e-16,1;UBERON:0001567,3.07e-16,1;UBERON:0008801,3.07e-16,1;UBERON:0002081,6.94e-09,2;UBERON:0010227,6.94e-09,2;UBERON:0002133,7.49e-09,2;UBERON:0001829,8.74e-09,2;UBERON:0004089,8.74e-09,2;UBERON:0007023,6.99e-08,114;UBERON:0001042,3.65e-07,10;UBERON:0009145,3.65e-07,10;UBERON:0000974,3.89e-07,10;UBERON:0000166,7.18e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.229160424011684,0,0,0.858452096273142,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,4.53200186031526,5.0304775359561,25.5159174894404,3.39997695141398,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0,9.16906122174218,8.09419066976717,0,0,0.224263725161227,0,0.404234377916439,9.14410341167238,18.1383649575199,0.606168477131288,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.229160424011684,0,0,0.858452096273142,0.446342914883745,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,4.53200186031526,5.0304775359561,25.5159174894404,3.39997695141398,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.535928260312357,0,0,9.16906122174218,8.09419066976717,0,0,0.224263725161227,0,0.404234377916439,9.14410341167238,18.1383649575199,0.606168477131288,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p35@PRRX1 | |short_description=p35@PRRX1 | ||
}} | }} |
Latest revision as of 14:31, 18 September 2015
Short description: | p35@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_PRRX1_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -3bp_to_ENST00000485529_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data