FFCP PHASE1:Hg19::chr12:72148820..72148829,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:72148820..72148829,+
|short_description=p4@RAB21
|description=CAGE_peak_4_at_RAB21_5end
|association_with_transcript=162bp_to_NM_014999,uc001swt.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23011 | |EntrezGene=23011 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18263 | |HGNC=18263 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL25 | |UniProt=Q9UL25 | ||
|association_with_transcript=162bp_to_NM_014999,uc001swt.2_5end | |||
|cluster_id=chr12:72148820..72148829,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_RAB21_5end | |||
|id=chr12:72148820..72148829,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.53e-22!42;CL:0000860!1.57e-22!45;CL:0000738!3.52e-19!140;CL:0000766!1.83e-17!76;CL:0000557!1.88e-14!71;CL:0002009!3.37e-14!65;CL:0000839!1.46e-13!70;CL:0002031!1.46e-13!124;CL:0002087!3.67e-13!119;CL:0002194!5.03e-13!63;CL:0000576!5.03e-13!63;CL:0000040!5.03e-13!63;CL:0000559!5.03e-13!63;CL:0000988!1.47e-12!182;CL:0000037!1.58e-12!172;CL:0000566!1.58e-12!172;CL:0002032!2.38e-11!165;CL:0000837!2.38e-11!165;CL:0000763!1.38e-10!112;CL:0000049!1.38e-10!112;CL:0002393!1.71e-07!9;CL:0002397!1.71e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.31e-28;33!CL:0002057;3.31e-28;33!CL:0000766;1.81e-22;69!CL:0000576;2.96e-22;48!CL:0002393;4.25e-20;6!CL:0002397;4.25e-20;6!CL:0000094;6.51e-20;8!CL:0000473;6.37e-19;39!CL:0000234;6.37e-19;39!CL:0000081;1.49e-18;11!CL:0002087;3.55e-11;104!CL:0000738;4.27e-11;136!CL:0000763;2.08e-10;100!CL:0000623;3.30e-10;3!CL:0000767;6.86e-10;3!CL:0000988;9.52e-09;177!CL:0000771;1.96e-08;2!CL:0001014;1.05e-07;2!CL:0001016;1.05e-07;2!CL:0000097;9.52e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.90e-49,136;CL:0000766,5.01e-47,72;CL:0000860,1.40e-42,42;CL:0002057,1.40e-42,42;CL:0000988,1.26e-40,177;CL:0000037,1.65e-37,168;CL:0000473,2.09e-36,48;CL:0000234,2.09e-36,48;CL:0000557,3.97e-36,67;CL:0002032,3.62e-34,161;CL:0000837,3.62e-34,161;CL:0002031,1.04e-33,120;CL:0000763,1.71e-32,108;CL:0000049,1.71e-32,108;CL:0002009,9.27e-32,61;CL:0000839,1.88e-31,66;CL:0002087,2.54e-29,115;CL:0002194,8.93e-28,59;CL:0000576,8.93e-28,59;CL:0000040,8.93e-28,59;CL:0000559,8.93e-28,59;CL:0000094,5.18e-20,8;CL:0000081,1.24e-18,11;CL:0000134,8.19e-16,354;CL:0002320,2.88e-15,361;CL:0000219,2.40e-13,386;CL:0002393,4.22e-13,9;CL:0002397,4.22e-13,9;CL:0000034,5.04e-11,441;CL:0000048,5.34e-11,427;CL:0000723,1.12e-10,433;CL:0000623,2.26e-10,3;CL:0000825,2.26e-10,3;CL:0000767,5.53e-10,3;CL:0000771,1.96e-08,2;CL:0001014,8.88e-08,2;CL:0001016,8.88e-08,2;CL:0000097,8.42e-07,5;CL:0002028,8.42e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.83e-29;42!CL:0000049;3.34e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.02e-11!80;UBERON:0002390!3.61e-11!102;UBERON:0003061!3.61e-11!102;UBERON:0001474!1.24e-09!86;UBERON:0002193!2.28e-09!112;UBERON:0004765!4.20e-08!101;UBERON:0001434!4.20e-08!101;UBERON:0002405!7.61e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.48e-34,98;UBERON:0003061,2.48e-34,98;UBERON:0002371,2.49e-33,76;UBERON:0001474,2.53e-30,82;UBERON:0002193,2.55e-30,108;UBERON:0004765,6.20e-27,90;UBERON:0002405,8.19e-26,93;UBERON:0001434,1.85e-23,100;UBERON:0002384,1.60e-14,371;UBERON:0003081,8.14e-14,203;UBERON:0002204,6.38e-12,167 | |||
|phase1_expression=0.363356758541113,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.0821005894499457,0.236132343941038,1.96682138424452,1.15148819429164,1.39334510984468,0,0,0,0.154934401160603,0,0,9.41792194504192,9.6261334785668,6.72733699219141,0,0,0,0.145398238779565,0.755751887377619,1.21292030593908,1.62700325833979,1.23350366406548,0.929119112685311,0.575384784644301,0.256160706529101,1.6553756092201,1.37898272294647,0,6.77132432971709,1.31769637679823,0,1.34834090667051,1.83650335422542,3.20929027076094,5.11469700639233,0,0.997318288108159,2.13112375266347,2.32167390902867,1.70215567407342,9.34233373493363,1.25624332628372,0.521482918420201,0.65156653411535,1.81619850790011,2.57794345191295,4.43047342417238,1.05627643155971,2.12604299965044,1.88692780957538,0.44931452458598,0.300353785683013,0.803627933485401,0.855038231223746,0.59675003159727,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0,2.84606484554724,5.28513470433845,1.52909291250092,0,4.48406850385229,0,1.37696839079683,1.17903228824749,0.616804496998528,0,0,0.473447805734733,0,0.111410456885174,0.589211814949674,0,0,0,0,0,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0.451725357233318,0,0,0,0,0.80642697289893,2.13952156626806,1.59306844271079,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.130979075497713,0,0.370784442784429,0.324547393654683,0,0,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,23.7204751384914,31.022421131866,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0.330881918197182,0,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0,0.0895585227028483,0,0,0,0,2.69526550203004,4.61183850934277,2.39860623510122,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,1.97030760201927,2.37190332345469,1.28343036279748,0,0,0,0,0,3.74503511973591,0,4.55857064779639,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0.206768026122887,1.72571360654893,1.921096040462,0,0,0.30239029332968,0,0,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0,0,0,0.519254429183621,0.232420756919918,0.120859449591622,0.200506470303285,0.460404944679482,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0.876901770507525,0,0,0,0,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0,0,0,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0.37428108081644,0.293016358543788,0.242721043499027,0.334330152832435,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0.20453736500431,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0,0,0.7812832832557,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0,0,0,0.0897576444097721,0.325942115766024,0.638002319463839,0.0915975934018623,1.06606955203727,0,0.156980256395025,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,3.55825354416746,2.59484271787656,2.29728288912002,0.269604531922708,0,0.234264445725339,0.364909578431332,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0,0.195984794828755,0.0870592065804026,0.34945333648406,0,0.19351266257817,0.0730893170861856,0.246346371159628,0.193978032976839,0,0.677942222341597,0.137041924646751,0,0.189932387867636,0,0.0801588202515337,0.21345299473935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| ||
|short_description=p4@RAB21 | |||
}} | }} |
Latest revision as of 17:35, 24 September 2015
Short description: | p4@RAB21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAB21_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 162bp_to_NM_014999, uc001swt.2_5end |
EntrezGene: | RAB21 |
HGNC: | 18263 |
UniProt: | Q9UL25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.48e-34 | 98 |
blood island | 2.48e-34 | 98 |
bone marrow | 2.49e-33 | 76 |
bone element | 2.53e-30 | 82 |
hemolymphoid system | 2.55e-30 | 108 |
skeletal element | 6.20e-27 | 90 |
immune system | 8.19e-26 | 93 |
skeletal system | 1.85e-23 | 100 |
connective tissue | 1.60e-14 | 371 |
lateral plate mesoderm | 8.14e-14 | 203 |
musculoskeletal system | 6.38e-12 | 167 |