FFCP PHASE1:Hg19::chr12:96744121..96744125,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:96744121..96744125,-
|short_description=p@chr12:96744121..96744125,-
|description=CAGE_peak_at_chr12:96744121..96744125,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:96744121..96744125,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr12:96744121..96744125,- | |||
|id=chr12:96744121..96744125,- | |||
|ontology_enrichment_celltype=CL:0000624!1.81e-08!6;CL:0000738!4.21e-07!140;CL:0000623!6.12e-07!3;CL:0000825!6.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.09e-33;18!CL:0000789;5.09e-33;18!CL:0002419;5.09e-33;18!CL:0000624;1.81e-25;6!CL:0000084;9.05e-24;25!CL:0000625;2.46e-14;11!CL:0000542;1.18e-08;53!CL:0000226;8.62e-07;3!CL:0000623;8.62e-07;3!CL:0000842;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.70e-33,18;CL:0000789,5.70e-33,18;CL:0002420,5.70e-33,18;CL:0002419,5.70e-33,18;CL:0000790,5.70e-33,18;CL:0000624,2.99e-25,6;CL:0000084,9.81e-24,25;CL:0000827,9.81e-24,25;CL:0000838,2.63e-15,52;CL:0000542,5.19e-15,53;CL:0000051,5.19e-15,53;CL:0000625,2.05e-14,11;CL:0002087,7.14e-11,115;CL:0000738,4.34e-09,136;CL:0002031,3.30e-08,120;CL:0000037,3.26e-07,168;CL:0000623,6.88e-07,3;CL:0000825,6.88e-07,3;CL:0000988,8.32e-07,177;CL:0000226,9.64e-07,3;CL:0000842,9.64e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.09e-33;18!UBERON:0005425;8.72e-18;1!CL:0000051;1.18e-08;53!UBERON:0003056;8.62e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.72e-18;1!UBERON:0001785;8.72e-18;1!UBERON:0002464;8.72e-18;1!UBERON:0004904;8.72e-18;1!UBERON:0001021;8.72e-18;1!UBERON:0003714;1.44e-09;2!UBERON:0005162;1.44e-09;2!UBERON:0000122;1.44e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.23e-18,1;UBERON:0001785,6.23e-18,1;UBERON:0002464,6.23e-18,1;UBERON:0004904,6.23e-18,1;UBERON:0001021,6.23e-18,1;UBERON:0003902,6.23e-18,1;UBERON:0005425,6.23e-18,1;UBERON:0003714,1.22e-09,2;UBERON:0005162,1.22e-09,2;UBERON:0000122,1.22e-09,2 | |||
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| ||
|short_description=p@chr12:96744121..96744125,- | |||
}} | }} |
Latest revision as of 13:54, 24 July 2015
Short description: | p@chr12:96744121..96744125, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96744121..96744125, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.70e-33 | 18 |
alpha-beta T cell | 5.70e-33 | 18 |
immature T cell | 5.70e-33 | 18 |
mature T cell | 5.70e-33 | 18 |
immature alpha-beta T cell | 5.70e-33 | 18 |
CD4-positive, alpha-beta T cell | 2.99e-25 | 6 |
T cell | 9.81e-24 | 25 |
pro-T cell | 9.81e-24 | 25 |
lymphoid lineage restricted progenitor cell | 2.63e-15 | 52 |
lymphocyte | 5.19e-15 | 53 |
common lymphoid progenitor | 5.19e-15 | 53 |
CD8-positive, alpha-beta T cell | 2.05e-14 | 11 |
nongranular leukocyte | 7.14e-11 | 115 |
leukocyte | 4.34e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 3.30e-08 | 120 |
hematopoietic stem cell | 3.26e-07 | 168 |
natural killer cell | 6.88e-07 | 3 |
pro-NK cell | 6.88e-07 | 3 |
hematopoietic cell | 8.32e-07 | 177 |
single nucleate cell | 9.64e-07 | 3 |
mononuclear cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.23e-18 | 1 |
cranial nerve | 6.23e-18 | 1 |
nerve trunk | 6.23e-18 | 1 |
nerve connecting eye with brain | 6.23e-18 | 1 |
nerve | 6.23e-18 | 1 |
retinal neural layer | 6.23e-18 | 1 |
presumptive neural retina | 6.23e-18 | 1 |
neural tissue | 1.22e-09 | 2 |
multi cell component structure | 1.22e-09 | 2 |
neuron projection bundle | 1.22e-09 | 2 |