FFCP PHASE1:Hg19::chr13:29233218..29233332,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:29233218..29233332,+
|short_description=p1@POMP
|description=CAGE_peak_1_at_POMP_5end
|association_with_transcript=0bp_to_ENST00000380842,ENST00000460403,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51371 | |EntrezGene=51371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20330 | |HGNC=20330 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y244 | |UniProt=Q9Y244 | ||
|association_with_transcript=0bp_to_ENST00000380842,ENST00000460403,uc001usf.2_5end | |||
|cluster_id=chr13:29233218..29233332,+ | |||
|description=CAGE_peak_1_at_POMP_5end | |||
|id=chr13:29233218..29233332,+ | |||
|ontology_enrichment_celltype=CL:0000012!4.07e-33!682;CL:0000548!4.57e-33!679;CL:0000004!4.57e-33!679;CL:0000255!4.57e-33!679;CL:0000144!7.74e-33!625;CL:0002371!1.80e-31!591;CL:0000034!2.69e-31!444;CL:0000048!5.28e-31!430;CL:0000723!1.49e-30!436;CL:0000003!1.08e-22!722;CL:0000055!6.70e-19!180;CL:0000680!2.61e-16!57;CL:0000056!2.61e-16!57;CL:0000355!2.61e-16!57;CL:0000393!3.37e-16!60;CL:0000211!3.37e-16!60;CL:0000187!4.20e-15!54;CL:0000192!5.55e-15!42;CL:0000514!5.55e-15!42;CL:0000134!7.38e-14!358;CL:0000359!1.35e-13!32;CL:0002320!2.95e-13!365;CL:0000219!2.95e-12!390;CL:0000183!7.09e-12!59;CL:0000063!1.35e-11!578;CL:0002321!2.36e-08!248;CL:0000220!3.66e-08!246;CL:0000222!5.07e-08!119;CL:0002194!3.50e-07!63;CL:0000576!3.50e-07!63;CL:0000040!3.50e-07!63;CL:0000559!3.50e-07!63;CL:0002009!3.87e-07!65;CL:0002494!4.10e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.11e-13;32!CL:0000192;1.76e-10;43!CL:0000187;9.98e-09;55!CL:0000393;2.34e-08;61!CL:0000211;2.34e-08;61!CL:0000473;3.39e-07;39!CL:0000234;3.39e-07;39!CL:0002494;3.91e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,5.74e-32,441;CL:0000048,1.10e-31,427;CL:0000723,3.19e-31,433;CL:0000680,3.02e-16,58;CL:0000056,3.02e-16,58;CL:0000355,3.02e-16,58;CL:0000393,3.82e-16,61;CL:0000211,3.82e-16,61;CL:0000187,4.82e-15,55;CL:0000192,7.08e-15,43;CL:0000514,7.08e-15,43;CL:0000134,2.88e-14,354;CL:0002320,1.19e-13,361;CL:0000359,1.35e-13,32;CL:0000219,1.29e-12,386;CL:0002321,2.64e-08,250;CL:0000222,6.55e-08,121;CL:0000473,7.69e-08,48;CL:0000234,7.69e-08,48;CL:0002194,1.04e-07,59;CL:0000576,1.04e-07,59;CL:0000040,1.04e-07,59;CL:0000559,1.04e-07,59;CL:0002009,1.20e-07,61;CL:0002494,4.10e-07,16;CL:0000839,5.39e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000514;1.76e-10;43!CL:0000355;1.63e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.53e-20!167;UBERON:0000914!5.26e-19!83;UBERON:0002329!5.26e-19!83;UBERON:0003077!5.26e-19!83;UBERON:0003059!5.26e-19!83;UBERON:0007282!5.26e-19!83;UBERON:0009618!5.26e-19!83;UBERON:0007285!5.26e-19!83;UBERON:0004290!2.67e-17!70;UBERON:0000486!3.92e-16!82;UBERON:0001134!2.13e-15!61;UBERON:0002036!2.13e-15!61;UBERON:0003082!2.13e-15!61;UBERON:0002385!4.46e-14!63;UBERON:0001015!4.46e-14!63;UBERON:0000383!4.46e-14!63;UBERON:0002384!1.19e-12!375;UBERON:0001637!2.16e-09!42;UBERON:0003509!2.16e-09!42;UBERON:0004572!2.16e-09!42;UBERON:0004872!2.31e-08!84;UBERON:0004765!3.04e-07!101;UBERON:0001434!3.04e-07!101;UBERON:0000926!4.07e-07!448;UBERON:0004120!4.07e-07!448;UBERON:0006603!4.07e-07!448;UBERON:0004573!4.33e-07!33;UBERON:0004571!4.33e-07!33;UBERON:0005256!9.69e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.53e-20,167;UBERON:0002329,2.93e-17,71;UBERON:0003059,2.93e-17,71;UBERON:0007282,2.93e-17,71;UBERON:0004290,2.93e-17,71;UBERON:0009618,2.93e-17,71;UBERON:0007524,3.86e-17,73;UBERON:0003077,1.05e-16,72;UBERON:0007285,1.05e-16,72;UBERON:0000486,4.03e-16,83;UBERON:0001134,2.36e-15,62;UBERON:0002036,2.36e-15,62;UBERON:0003082,2.36e-15,62;UBERON:0002385,4.76e-14,64;UBERON:0001015,4.76e-14,64;UBERON:0000383,4.76e-14,64;UBERON:0007503,4.20e-13,78;UBERON:0002384,5.02e-13,371;UBERON:0000926,1.00e-12,315;UBERON:0004120,1.00e-12,315;UBERON:0006603,1.00e-12,315;UBERON:0001637,2.16e-09,42;UBERON:0003509,2.16e-09,42;UBERON:0004572,2.16e-09,42;UBERON:0004872,2.82e-08,83;UBERON:0000490,1.31e-07,148;UBERON:0001434,2.87e-07,100;UBERON:0004573,4.33e-07,33;UBERON:0004571,4.33e-07,33 | |||
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| ||
|short_description=p1@POMP | |||
}} | }} |
Latest revision as of 00:52, 17 September 2015
Short description: | p1@POMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_POMP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380842, ENST00000460403, uc001usf.2_5end |
EntrezGene: | POMP |
HGNC: | 20330 |
UniProt: | Q9Y244 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 5.74e-32 | 441 |
multi fate stem cell | 1.10e-31 | 427 |
somatic stem cell | 3.19e-31 | 433 |
muscle precursor cell | 3.02e-16 | 58 |
myoblast | 3.02e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.02e-16 | 58 |
electrically responsive cell | 3.82e-16 | 61 |
electrically active cell | 3.82e-16 | 61 |
muscle cell | 4.82e-15 | 55 |
smooth muscle cell | 7.08e-15 | 43 |
smooth muscle myoblast | 7.08e-15 | 43 |
mesenchymal cell | 2.88e-14 | 354 |
connective tissue cell | 1.19e-13 | 361 |
vascular associated smooth muscle cell | 1.35e-13 | 32 |
motile cell | 1.29e-12 | 386 |
embryonic cell | 2.64e-08 | 250 |
mesodermal cell | 6.55e-08 | 121 |
defensive cell | 7.69e-08 | 48 |
phagocyte | 7.69e-08 | 48 |
monopoietic cell | 1.04e-07 | 59 |
monocyte | 1.04e-07 | 59 |
monoblast | 1.04e-07 | 59 |
promonocyte | 1.04e-07 | 59 |
macrophage dendritic cell progenitor | 1.20e-07 | 61 |
cardiocyte | 4.10e-07 | 16 |
myeloid lineage restricted progenitor cell | 5.39e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.53e-20 | 167 |
somite | 2.93e-17 | 71 |
presomitic mesoderm | 2.93e-17 | 71 |
presumptive segmental plate | 2.93e-17 | 71 |
dermomyotome | 2.93e-17 | 71 |
trunk paraxial mesoderm | 2.93e-17 | 71 |
dense mesenchyme tissue | 3.86e-17 | 73 |
paraxial mesoderm | 1.05e-16 | 72 |
presumptive paraxial mesoderm | 1.05e-16 | 72 |
multilaminar epithelium | 4.03e-16 | 83 |
skeletal muscle tissue | 2.36e-15 | 62 |
striated muscle tissue | 2.36e-15 | 62 |
myotome | 2.36e-15 | 62 |
muscle tissue | 4.76e-14 | 64 |
musculature | 4.76e-14 | 64 |
musculature of body | 4.76e-14 | 64 |
epithelial vesicle | 4.20e-13 | 78 |
connective tissue | 5.02e-13 | 371 |
mesoderm | 1.00e-12 | 315 |
mesoderm-derived structure | 1.00e-12 | 315 |
presumptive mesoderm | 1.00e-12 | 315 |
artery | 2.16e-09 | 42 |
arterial blood vessel | 2.16e-09 | 42 |
arterial system | 2.16e-09 | 42 |
splanchnic layer of lateral plate mesoderm | 2.82e-08 | 83 |
unilaminar epithelium | 1.31e-07 | 148 |
skeletal system | 2.87e-07 | 100 |
systemic artery | 4.33e-07 | 33 |
systemic arterial system | 4.33e-07 | 33 |