FFCP PHASE1:Hg19::chr20:5590491..5590495,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:5590491..5590495,- | |||
|coexpression_cluster_id=C407 | |||
|description=CAGE_peak_at_chr20:5590491..5590495,- | |description=CAGE_peak_at_chr20:5590491..5590495,- | ||
|id=chr20:5590491..5590495,- | |id=chr20:5590491..5590495,- | ||
|ontology_enrichment_celltype=CL:0000738!1.57e-43!140;CL:0002031!4.04e-39!124;CL:0002087!3.20e-38!119;CL:0000037!1.44e-35!172;CL:0000566!1.44e-35!172;CL:0002032!3.40e-33!165;CL:0000837!3.40e-33!165;CL:0000988!5.61e-32!182;CL:0000766!1.94e-29!76;CL:0002057!6.63e-28!42;CL:0000839!5.26e-25!70;CL:0000860!1.13e-24!45;CL:0000557!1.51e-23!71;CL:0002009!4.30e-23!65;CL:0002194!9.28e-23!63;CL:0000576!9.28e-23!63;CL:0000040!9.28e-23!63;CL:0000559!9.28e-23!63;CL:0000763!4.70e-19!112;CL:0000049!4.70e-19!112;CL:0000542!2.56e-13!53;CL:0000051!2.56e-13!53;CL:0000838!2.81e-13!52;CL:0000945!7.89e-08!24;CL:0000826!7.89e-08!24;CL:0000094!4.57e-07!8;CL:0002393!5.05e-07!9;CL:0002397!5.05e-07!9 | |ontology_enrichment_celltype=CL:0000738!1.57e-43!140;CL:0002031!4.04e-39!124;CL:0002087!3.20e-38!119;CL:0000037!1.44e-35!172;CL:0000566!1.44e-35!172;CL:0002032!3.40e-33!165;CL:0000837!3.40e-33!165;CL:0000988!5.61e-32!182;CL:0000766!1.94e-29!76;CL:0002057!6.63e-28!42;CL:0000839!5.26e-25!70;CL:0000860!1.13e-24!45;CL:0000557!1.51e-23!71;CL:0002009!4.30e-23!65;CL:0002194!9.28e-23!63;CL:0000576!9.28e-23!63;CL:0000040!9.28e-23!63;CL:0000559!9.28e-23!63;CL:0000763!4.70e-19!112;CL:0000049!4.70e-19!112;CL:0000542!2.56e-13!53;CL:0000051!2.56e-13!53;CL:0000838!2.81e-13!52;CL:0000945!7.89e-08!24;CL:0000826!7.89e-08!24;CL:0000094!4.57e-07!8;CL:0002393!5.05e-07!9;CL:0002397!5.05e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-42;33!CL:0002057;1.37e-42;33!CL:0000576;6.06e-31;48!CL:0000473;2.43e-30;39!CL:0000234;2.43e-30;39!CL:0000766;2.94e-25;69!CL:0002087;1.09e-17;104!CL:0000738;9.19e-14;136!CL:0000094;1.43e-13;8!CL:0000763;1.61e-11;100!CL:0000081;2.68e-11;11!CL:0002393;4.67e-10;6!CL:0002397;4.67e-10;6!CL:0000624;1.40e-09;6!CL:0000988;2.13e-09;177!CL:0000791;2.77e-08;18!CL:0000789;2.77e-08;18!CL:0002419;2.77e-08;18!CL:0000542;1.79e-07;53!CL:0000219;3.30e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.11e-67,136;CL:0000860,3.12e-59,42;CL:0002057,3.12e-59,42;CL:0002031,5.03e-56,120;CL:0002087,2.03e-55,115;CL:0000766,3.22e-55,72;CL:0000037,5.29e-55,168;CL:0000473,1.61e-52,48;CL:0000234,1.61e-52,48;CL:0000988,3.76e-52,177;CL:0002032,1.15e-50,161;CL:0000837,1.15e-50,161;CL:0000839,9.35e-46,66;CL:0002009,5.61e-43,61;CL:0000557,6.08e-43,67;CL:0002194,7.11e-43,59;CL:0000576,7.11e-43,59;CL:0000040,7.11e-43,59;CL:0000559,7.11e-43,59;CL:0000763,1.99e-37,108;CL:0000049,1.99e-37,108;CL:0000134,2.50e-14,354;CL:0000094,1.45e-13,8;CL:0002320,1.46e-13,361;CL:0002393,1.80e-13,9;CL:0002397,1.80e-13,9;CL:0000838,4.60e-12,52;CL:0000542,1.07e-11,53;CL:0000051,1.07e-11,53;CL:0000081,2.14e-11,11;CL:0000219,6.68e-11,386;CL:0000624,1.26e-09,6;CL:0000048,5.93e-09,427;CL:0000034,9.92e-09,441;CL:0000723,1.68e-08,433;CL:0000791,2.54e-08,18;CL:0000789,2.54e-08,18;CL:0002420,2.54e-08,18;CL:0002419,2.54e-08,18;CL:0000790,2.54e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.81e-42;42!CL:0000049;2.08e-10;108!CL:0000790;2.77e-08;18!CL:0000051;1.79e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.78e-26!102;UBERON:0003061!2.78e-26!102;UBERON:0002193!3.33e-22!112;UBERON:0002371!1.61e-20!80;UBERON:0001474!9.33e-20!86;UBERON:0004765!1.53e-15!101;UBERON:0001434!1.53e-15!101;UBERON:0002405!1.54e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.57e-08;15!UBERON:0000179;3.57e-08;15!UBERON:0000463;3.57e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.91e-44,98;UBERON:0003061,6.91e-44,98;UBERON:0002193,5.76e-38,108;UBERON:0002371,2.05e-37,76;UBERON:0001474,1.76e-33,82;UBERON:0002405,2.01e-30,93;UBERON:0004765,4.56e-29,90;UBERON:0001434,1.43e-24,100;UBERON:0003081,8.85e-13,203;UBERON:0002384,1.60e-12,371;UBERON:0002204,4.83e-10,167;UBERON:0000178,2.67e-08,15;UBERON:0000179,2.67e-08,15;UBERON:0000463,2.67e-08,15 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,1.14620108621927,0.821005894499457,0.787107813136792,4.72037132218685,18.039981710569,9.44378352228064,0,0,0,0.92960640696362,2.27470771979874,0.587200878669695,28.2537658351257,66.9818454550273,40.1470110824326,0.671746422719773,0.971680998056939,0,9.59628375945127,6.04601509902095,5.57943340731977,13.7133131774354,9.86802931252382,14.2464930611748,14.3846196161075,14.3449995656296,5.20260905754887,39.9904989654477,22.5919639254339,12.1883837934908,11.6710250516415,7.91427835167753,5.16864014223695,20.5076207888505,14.1208771913481,21.7374622771674,7.91643120448119,8.7764009353518,4.68847225585964,13.3496249769149,5.10646702222026,4.35975574296902,25.3761151909311,26.0741459210101,6.5156653411535,8.47559303686716,3.31449872388808,5.06339819905415,4.01385043992689,6.16552469898626,4.40283155567589,4.83013113929929,9.91167492753942,3.05378614724452,5.70025487482497,2.78483348078726,4.01861138282195,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.800791974072025,2.87376219977242,2.64417949113945,2.86216126360609,13.0918982895173,15.2681669236444,7.26319133437935,1.32171328579026,1.68152568894461,0.526768169550154,18.2940086205865,33.7989255964282,19.5321424049534,0.167186495390678,3.2592226663359,5.6813736688168,0,1.11410456885174,3.82987679717288,3.76607620792156,1.62482318259009,1.66518715643378,1.04047478047903,1.47994114143309,0.829050053357545,0.289803085735052,3.26230438956533,5.61835738988397,3.1360657141493,0.226618685395132,4.98186641682498,7.90343124610049,1.51811815211702,0.637130828648193,0.651083453856419,0.950452044448374,0,0.127986611154418,1.24930726552346,1.4206635122641,0,6.65302252641617,21.9300960542476,13.0341963494519,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,0.589405839739707,0.364295288292542,0,1.29818957461873,0.348259474598534,0,4.05434061319081,1.14398982156026,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,34.2629085333764,27.1446184903828,0,0,0.25326102332916,0.264818361626438,0,0.709336764396714,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0.919463387397059,0.300476117813194,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0.506328996723799,0,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0.790204397959275,0,0.492434012174795,0.702012795417713,0.594524649154913,0,0,0,0.985143749731331,0,0,0.492663237895943,0.264145302039678,1.03664057770386,2.16179930125442,1.13618190083742,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,4.21667878966063,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0,0.448340575974109,6.30498432646167,20.2689920367946,16.5562516800875,0,0,0.773288812777695,0.167516265334349,1.27587750330633,55.4265197720915,68.8071356169257,25.6937618330342,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,11.3722414367588,26.9642751023271,5.76328812138599,0,0,0,0,0.460385919864187,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.355123450626254,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.40101294060657,2.94659164594868,0,0.364182336013434,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,1.97333888981341,1.8300481571743,0,0,0,0.515205058238611,0,0.82509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,1.07420244868274,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.255225424989168,0.50578890427775,0,0.62962469366128,0.6970372701606,0,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0,0.75894634753143,0,0.192444225451024,0,0,0.564862804660675,0,0,0,0.229723400206959,1.52234282769651,0.764637207142375,7.40541343326411,3.81170840732462,4.93634727703433,0,2.16012574895246,9.51750211553125,0.427296284509893,0,0.490080431962063,0.371606350251437,0.144269212976445,0.284567373393656,0,0,0.191505370132367,0.423347165447766,0,0,0.456469358066384,0.156679895773023,0,0.169291777801603,0.642352300414798,0,0.851692475380653,0,0.614481528616916,0.894704431569664,0.667396566847634,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0.445773537109913,0.852408440419239,0,0.296964680832639,0.307160702099232,0.994147647766298,0.281338832821026,0.333926115068718,0.1648038742267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| ||
|short_description=p@chr20:5590491..5590495,- | |short_description=p@chr20:5590491..5590495,- | ||
}} | }} |
Latest revision as of 15:41, 28 July 2015
Short description: | p@chr20:5590491..5590495, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5590491..5590495, - |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.91e-44 | 98 |
blood island | 6.91e-44 | 98 |
hemolymphoid system | 5.76e-38 | 108 |
bone marrow | 2.05e-37 | 76 |
bone element | 1.76e-33 | 82 |
immune system | 2.01e-30 | 93 |
skeletal element | 4.56e-29 | 90 |
skeletal system | 1.43e-24 | 100 |
lateral plate mesoderm | 8.85e-13 | 203 |
connective tissue | 1.60e-12 | 371 |
musculoskeletal system | 4.83e-10 | 167 |
blood | 2.67e-08 | 15 |
haemolymphatic fluid | 2.67e-08 | 15 |
organism substance | 2.67e-08 | 15 |