FFCP PHASE1:Hg19::chr13:73301819..73301830,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:73301819..73301830,-
|short_description=p2@MZT1
|description=CAGE_peak_2_at_MZT1_5end
|association_with_transcript=0bp_to_ENST00000377818_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=440145 | |EntrezGene=440145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33830 | |HGNC=33830 | ||
|TSSclassifier=strong | |||
|UniProt=Q08AG7 | |UniProt=Q08AG7 | ||
|association_with_transcript=0bp_to_ENST00000377818_5end | |||
|cluster_id=chr13:73301819..73301830,- | |||
|description=CAGE_peak_2_at_MZT1_5end | |||
|id=chr13:73301819..73301830,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002321;9.26e-09;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.92e-29!235;DOID:14566!7.57e-29!239;DOID:0050687!1.09e-16!143;DOID:305!8.75e-12!106;DOID:0050686!4.21e-11!137;DOID:3095!9.63e-09!22;DOID:2994!9.63e-09!22;DOID:2531!7.80e-07!51;DOID:0060083!7.80e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.36e-09;22!DOID:2994;1.36e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.66e-23,235;DOID:14566,9.78e-23,239;DOID:0050687,5.51e-14,143;DOID:3095,3.23e-10,22;DOID:2994,3.23e-10,22;DOID:305,5.67e-10,106;DOID:0050686,7.10e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.91e-11!94;UBERON:0001016!1.91e-11!94;UBERON:0001869!3.05e-10!32;UBERON:0005743!6.99e-10!86;UBERON:0001017!8.44e-10!82;UBERON:0002020!2.91e-09!34;UBERON:0003528!2.91e-09!34;UBERON:0002346!3.18e-09!90;UBERON:0003056!5.58e-09!61;UBERON:0000956!7.68e-09!25;UBERON:0000203!7.68e-09!25;UBERON:0001893!1.06e-08!34;UBERON:0002791!2.22e-08!33;UBERON:0002780!2.96e-08!41;UBERON:0001890!2.96e-08!41;UBERON:0006240!2.96e-08!41;UBERON:0000955!4.30e-08!69;UBERON:0006238!4.30e-08!69;UBERON:0000924!5.08e-08!173;UBERON:0006601!5.08e-08!173;UBERON:0003075!7.43e-08!86;UBERON:0007284!7.43e-08!86;UBERON:0001049!1.00e-07!57;UBERON:0005068!1.00e-07!57;UBERON:0006241!1.00e-07!57;UBERON:0007135!1.00e-07!57;UBERON:0003080!1.34e-07!42;UBERON:0002619!1.81e-07!22;UBERON:0004121!5.68e-07!169;UBERON:0002616!5.78e-07!59;UBERON:0001950!7.77e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.14e-10;32!UBERON:0000956;1.86e-10;25!UBERON:0000203;1.86e-10;25!UBERON:0002791;8.83e-10;32!UBERON:0003528;8.93e-10;34!UBERON:0002020;8.93e-10;34!UBERON:0001893;2.39e-09;34!UBERON:0002619;1.16e-08;22!UBERON:0001950;7.11e-08;20!UBERON:0002780;5.99e-07;41!UBERON:0001890;5.99e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.00e-13,89;UBERON:0001869,4.15e-11,32;UBERON:0001017,4.36e-11,81;UBERON:0003528,2.35e-10,34;UBERON:0002020,2.35e-10,34;UBERON:0000956,4.24e-10,25;UBERON:0000203,4.24e-10,25;UBERON:0002791,4.69e-10,32;UBERON:0002346,6.65e-10,86;UBERON:0001893,7.54e-10,34;UBERON:0003056,1.01e-09,61;UBERON:0000955,1.47e-09,68;UBERON:0006238,1.47e-09,68;UBERON:0002780,4.25e-09,41;UBERON:0001890,4.25e-09,41;UBERON:0003080,4.25e-09,41;UBERON:0006240,4.25e-09,41;UBERON:0000073,5.09e-09,53;UBERON:0002616,5.09e-09,53;UBERON:0004121,7.47e-09,171;UBERON:0000924,7.47e-09,171;UBERON:0006601,7.47e-09,171;UBERON:0001049,1.15e-08,56;UBERON:0005068,1.15e-08,56;UBERON:0006241,1.15e-08,56;UBERON:0007135,1.15e-08,56;UBERON:0002619,2.10e-08,22;UBERON:0003075,2.91e-08,82;UBERON:0007284,2.91e-08,82;UBERON:0001950,1.28e-07,20;UBERON:0010371,4.76e-07,104 | |||
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| ||
|short_description=p2@MZT1 | |||
}} | }} |
Latest revision as of 22:16, 17 September 2015
Short description: | p2@MZT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MZT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377818_5end |
EntrezGene: | MZT1 |
HGNC: | 33830 |
UniProt: | Q08AG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.00e-13 | 89 |
cerebral hemisphere | 4.15e-11 | 32 |
central nervous system | 4.36e-11 | 81 |
brain grey matter | 2.35e-10 | 34 |
gray matter | 2.35e-10 | 34 |
cerebral cortex | 4.24e-10 | 25 |
pallium | 4.24e-10 | 25 |
regional part of telencephalon | 4.69e-10 | 32 |
neurectoderm | 6.65e-10 | 86 |
telencephalon | 7.54e-10 | 34 |
pre-chordal neural plate | 1.01e-09 | 61 |
brain | 1.47e-09 | 68 |
future brain | 1.47e-09 | 68 |
regional part of forebrain | 4.25e-09 | 41 |
forebrain | 4.25e-09 | 41 |
anterior neural tube | 4.25e-09 | 41 |
future forebrain | 4.25e-09 | 41 |
regional part of nervous system | 5.09e-09 | 53 |
regional part of brain | 5.09e-09 | 53 |
ectoderm-derived structure | 7.47e-09 | 171 |
ectoderm | 7.47e-09 | 171 |
presumptive ectoderm | 7.47e-09 | 171 |
neural tube | 1.15e-08 | 56 |
neural rod | 1.15e-08 | 56 |
future spinal cord | 1.15e-08 | 56 |
neural keel | 1.15e-08 | 56 |
regional part of cerebral cortex | 2.10e-08 | 22 |
neural plate | 2.91e-08 | 82 |
presumptive neural plate | 2.91e-08 | 82 |
neocortex | 1.28e-07 | 20 |
ecto-epithelium | 4.76e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.66e-23 | 235 |
disease of cellular proliferation | 9.78e-23 | 239 |
cell type cancer | 5.51e-14 | 143 |
germ cell and embryonal cancer | 3.23e-10 | 22 |
germ cell cancer | 3.23e-10 | 22 |
carcinoma | 5.67e-10 | 106 |
organ system cancer | 7.10e-08 | 137 |