FFCP PHASE1:Hg19::chr2:182322231..182322262,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3676 | |EntrezGene=3676 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6140 | |HGNC=6140 | ||
|TSSclassifier=strong | |||
|UniProt=E7EP60 | |UniProt=E7EP60 | ||
|association_with_transcript=76bp_to_ENST00000233573_5end | |association_with_transcript=76bp_to_ENST00000233573_5end | ||
|cluster_id=chr2:182322231..182322262,+ | |||
|coexpression_cluster_id=C4155 | |||
|description=CAGE_peak_2_at_ITGA4_5end | |description=CAGE_peak_2_at_ITGA4_5end | ||
|id=chr2:182322231..182322262,+ | |id=chr2:182322231..182322262,+ | ||
|ontology_enrichment_celltype=CL:0000048!7.21e-48!430;CL:0000723!5.15e-46!436;CL:0000034!6.11e-46!444;CL:0000037!1.06e-43!172;CL:0000566!1.06e-43!172;CL:0000988!1.49e-41!182;CL:0000134!2.27e-41!358;CL:0002320!2.36e-41!365;CL:0002032!3.61e-40!165;CL:0000837!3.61e-40!165;CL:0000219!5.74e-35!390;CL:0000738!5.86e-35!140;CL:0002087!2.87e-30!119;CL:0000763!6.72e-29!112;CL:0000049!6.72e-29!112;CL:0002031!5.66e-28!124;CL:0000766!1.47e-22!76;CL:0002057!9.17e-21!42;CL:0000839!3.84e-19!70;CL:0000557!3.86e-19!71;CL:0002194!5.61e-19!63;CL:0000576!5.61e-19!63;CL:0000040!5.61e-19!63;CL:0000559!5.61e-19!63;CL:0002371!1.59e-18!591;CL:0002009!9.60e-18!65;CL:0000860!3.96e-17!45;CL:0000144!9.66e-15!625;CL:0000542!4.08e-10!53;CL:0000051!4.08e-10!53;CL:0000838!4.36e-10!52;CL:0000003!5.15e-08!722;CL:0002393!4.02e-07!9;CL:0002397!4.02e-07!9;CL:0000057!8.32e-07!75 | |ontology_enrichment_celltype=CL:0000048!7.21e-48!430;CL:0000723!5.15e-46!436;CL:0000034!6.11e-46!444;CL:0000037!1.06e-43!172;CL:0000566!1.06e-43!172;CL:0000988!1.49e-41!182;CL:0000134!2.27e-41!358;CL:0002320!2.36e-41!365;CL:0002032!3.61e-40!165;CL:0000837!3.61e-40!165;CL:0000219!5.74e-35!390;CL:0000738!5.86e-35!140;CL:0002087!2.87e-30!119;CL:0000763!6.72e-29!112;CL:0000049!6.72e-29!112;CL:0002031!5.66e-28!124;CL:0000766!1.47e-22!76;CL:0002057!9.17e-21!42;CL:0000839!3.84e-19!70;CL:0000557!3.86e-19!71;CL:0002194!5.61e-19!63;CL:0000576!5.61e-19!63;CL:0000040!5.61e-19!63;CL:0000559!5.61e-19!63;CL:0002371!1.59e-18!591;CL:0002009!9.60e-18!65;CL:0000860!3.96e-17!45;CL:0000144!9.66e-15!625;CL:0000542!4.08e-10!53;CL:0000051!4.08e-10!53;CL:0000838!4.36e-10!52;CL:0000003!5.15e-08!722;CL:0002393!4.02e-07!9;CL:0002397!4.02e-07!9;CL:0000057!8.32e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000576;8.00e-15;48!CL:0000860;2.27e-14;33!CL:0002057;2.27e-14;33!CL:0000473;4.11e-13;39!CL:0000234;4.11e-13;39!CL:0000766;2.29e-12;69!CL:0000763;9.10e-12;100!CL:0002087;4.98e-10;104!CL:0000738;7.54e-09;136!CL:0000988;3.96e-08;177!CL:0002620;7.73e-07;23!CL:0000542;8.43e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.25e-50,427;CL:0000037,8.33e-49,168;CL:0000723,9.50e-49,433;CL:0000034,2.07e-48,441;CL:0000988,1.87e-46,177;CL:0002032,4.81e-45,161;CL:0000837,4.81e-45,161;CL:0000134,1.52e-44,354;CL:0002320,1.65e-44,361;CL:0000738,2.45e-39,136;CL:0000219,1.32e-37,386;CL:0002087,2.31e-34,115;CL:0000763,3.16e-33,108;CL:0000049,3.16e-33,108;CL:0002031,6.91e-32,120;CL:0000766,1.89e-26,72;CL:0000557,7.57e-23,67;CL:0002194,8.91e-23,59;CL:0000576,8.91e-23,59;CL:0000040,8.91e-23,59;CL:0000559,8.91e-23,59;CL:0000839,9.90e-23,66;CL:0000473,3.11e-22,48;CL:0000234,3.11e-22,48;CL:0000860,1.75e-21,42;CL:0002057,1.75e-21,42;CL:0002009,1.98e-21,61;CL:0000542,1.27e-10,53;CL:0000051,1.27e-10,53;CL:0000838,1.36e-10,52;CL:0002393,2.48e-07,9;CL:0002397,2.48e-07,9;CL:0002620,7.98e-07,23;CL:0000057,9.79e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;9.90e-16;42!CL:0000049;2.12e-10;108!CL:0000051;8.43e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!1.52e-08!31;DOID:2531!2.68e-08!51;DOID:0060083!2.68e-08!51;DOID:1240!8.41e-08!39 | |ontology_enrichment_disease=DOID:8692!1.52e-08!31;DOID:2531!2.68e-08!51;DOID:0060083!2.68e-08!51;DOID:1240!8.41e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.08e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.07e-09,31;DOID:2531,4.59e-09,51;DOID:0060083,4.59e-09,51;DOID:1240,1.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.00e-40!375;UBERON:0002390!1.30e-27!102;UBERON:0003061!1.30e-27!102;UBERON:0002193!1.58e-26!112;UBERON:0002371!1.82e-19!80;UBERON:0001474!2.26e-19!86;UBERON:0002204!2.90e-17!167;UBERON:0004765!1.18e-14!101;UBERON:0001434!1.18e-14!101;UBERON:0002405!1.87e-13!115;UBERON:0003081!3.85e-13!216;UBERON:0000178!1.77e-07!15;UBERON:0000179!1.77e-07!15;UBERON:0000463!1.77e-07!15 | |ontology_enrichment_uberon=UBERON:0002384!3.00e-40!375;UBERON:0002390!1.30e-27!102;UBERON:0003061!1.30e-27!102;UBERON:0002193!1.58e-26!112;UBERON:0002371!1.82e-19!80;UBERON:0001474!2.26e-19!86;UBERON:0002204!2.90e-17!167;UBERON:0004765!1.18e-14!101;UBERON:0001434!1.18e-14!101;UBERON:0002405!1.87e-13!115;UBERON:0003081!3.85e-13!216;UBERON:0000178!1.77e-07!15;UBERON:0000179!1.77e-07!15;UBERON:0000463!1.77e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.41e-08;32!UBERON:0000178;1.20e-07;15!UBERON:0000179;1.20e-07;15!UBERON:0000463;1.20e-07;15 | |||
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|short_description=p2@ITGA4 | |short_description=p2@ITGA4 | ||
}} | }} |
Latest revision as of 21:05, 18 September 2015
Short description: | p2@ITGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGA4_5end |
Coexpression cluster: | C4155_granulocyte_CD14_CD14CD16_acute_CD4_Preadipocyte_CD133 |
Association with transcript: | 76bp_to_ENST00000233573_5end |
EntrezGene: | ITGA4 |
HGNC: | 6140 |
UniProt: | E7EP60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.56e-43 | 371 |
hematopoietic system | 1.74e-31 | 98 |
blood island | 1.74e-31 | 98 |
hemolymphoid system | 6.34e-30 | 108 |
immune system | 2.48e-23 | 93 |
bone marrow | 7.90e-23 | 76 |
bone element | 1.01e-22 | 82 |
skeletal element | 5.72e-20 | 90 |
musculoskeletal system | 1.23e-18 | 167 |
skeletal system | 8.43e-17 | 100 |
lateral plate mesoderm | 1.34e-14 | 203 |
mesoderm | 8.35e-11 | 315 |
mesoderm-derived structure | 8.35e-11 | 315 |
presumptive mesoderm | 8.35e-11 | 315 |
blood | 1.06e-07 | 15 |
haemolymphatic fluid | 1.06e-07 | 15 |
organism substance | 1.06e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.07e-09 | 31 |
hematologic cancer | 4.59e-09 | 51 |
immune system cancer | 4.59e-09 | 51 |
leukemia | 1.60e-08 | 39 |