FFCP PHASE1:Hg19::chr9:101984577..101984616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10952 | |EntrezGene=10952 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16993 | |HGNC=16993 | ||
|TSSclassifier=strong | |||
|UniProt=P60468 | |UniProt=P60468 | ||
|association_with_transcript=0bp_to_ENST00000223641,ENST00000481573_5end | |association_with_transcript=0bp_to_ENST00000223641,ENST00000481573_5end | ||
|cluster_id=chr9:101984577..101984616,+ | |||
|description=CAGE_peak_2_at_SEC61B_5end | |description=CAGE_peak_2_at_SEC61B_5end | ||
|id=chr9:101984577..101984616,+ | |id=chr9:101984577..101984616,+ | ||
|ontology_enrichment_celltype=CL:0000144!2.80e-56!625;CL:0002371!1.94e-51!591;CL:0000012!3.56e-49!682;CL:0000548!1.06e-46!679;CL:0000004!1.06e-46!679;CL:0000255!1.06e-46!679;CL:0000034!5.37e-33!444;CL:0000048!2.19e-31!430;CL:0000723!2.40e-31!436;CL:0000003!1.58e-30!722;CL:0000055!4.07e-23!180;CL:0000222!8.48e-23!119;CL:0000220!3.86e-20!246;CL:0002321!5.34e-20!248;CL:0000183!5.39e-19!59;CL:0000680!2.92e-18!57;CL:0000056!2.92e-18!57;CL:0000355!2.92e-18!57;CL:0000393!1.06e-17!60;CL:0000211!1.06e-17!60;CL:0000187!1.53e-17!54;CL:0000192!3.57e-17!42;CL:0000514!3.57e-17!42;CL:0000063!8.33e-16!578;CL:0000359!1.39e-13!32;CL:0002320!1.73e-13!365;CL:0000134!7.30e-13!358;CL:0000219!7.79e-12!390;CL:0000057!2.37e-09!75;CL:0002494!4.16e-07!16;CL:0000213!8.91e-07!57;CL:0000215!8.91e-07!57 | |ontology_enrichment_celltype=CL:0000144!2.80e-56!625;CL:0002371!1.94e-51!591;CL:0000012!3.56e-49!682;CL:0000548!1.06e-46!679;CL:0000004!1.06e-46!679;CL:0000255!1.06e-46!679;CL:0000034!5.37e-33!444;CL:0000048!2.19e-31!430;CL:0000723!2.40e-31!436;CL:0000003!1.58e-30!722;CL:0000055!4.07e-23!180;CL:0000222!8.48e-23!119;CL:0000220!3.86e-20!246;CL:0002321!5.34e-20!248;CL:0000183!5.39e-19!59;CL:0000680!2.92e-18!57;CL:0000056!2.92e-18!57;CL:0000355!2.92e-18!57;CL:0000393!1.06e-17!60;CL:0000211!1.06e-17!60;CL:0000187!1.53e-17!54;CL:0000192!3.57e-17!42;CL:0000514!3.57e-17!42;CL:0000063!8.33e-16!578;CL:0000359!1.39e-13!32;CL:0002320!1.73e-13!365;CL:0000134!7.30e-13!358;CL:0000219!7.79e-12!390;CL:0000057!2.37e-09!75;CL:0002494!4.16e-07!16;CL:0000213!8.91e-07!57;CL:0000215!8.91e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.59e-13;32!CL:0000192;2.69e-12;43!CL:0000187;3.89e-10;55!CL:0000393;6.41e-09;61!CL:0000211;6.41e-09;61!CL:0002494;4.21e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.52e-34,441;CL:0000048,1.90e-32,427;CL:0000723,2.11e-32,433;CL:0000222,2.51e-23,121;CL:0002321,1.70e-20,250;CL:0000680,2.37e-18,58;CL:0000056,2.37e-18,58;CL:0000355,2.37e-18,58;CL:0000393,8.40e-18,61;CL:0000211,8.40e-18,61;CL:0000187,1.25e-17,55;CL:0000192,3.14e-17,43;CL:0000514,3.14e-17,43;CL:0002320,4.73e-14,361;CL:0000359,1.39e-13,32;CL:0000134,2.04e-13,354;CL:0000219,2.43e-12,386;CL:0000057,1.92e-09,76;CL:0002494,4.16e-07,16;CL:0000213,4.55e-07,58;CL:0000215,4.55e-07,58;CL:0002078,7.05e-07,45;CL:0000115,9.24e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;2.69e-12;43!CL:0000355;5.95e-10;58!CL:0000222;8.82e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.29e-17!83;UBERON:0002329!8.29e-17!83;UBERON:0003077!8.29e-17!83;UBERON:0003059!8.29e-17!83;UBERON:0007282!8.29e-17!83;UBERON:0009618!8.29e-17!83;UBERON:0007285!8.29e-17!83;UBERON:0004290!9.63e-17!70;UBERON:0000486!1.48e-16!82;UBERON:0002049!1.51e-16!79;UBERON:0007798!1.51e-16!79;UBERON:0001134!1.74e-15!61;UBERON:0002036!1.74e-15!61;UBERON:0003082!1.74e-15!61;UBERON:0003914!1.88e-15!118;UBERON:0000055!2.38e-15!69;UBERON:0005256!7.65e-15!143;UBERON:0004872!1.14e-14!84;UBERON:0000490!2.24e-14!138;UBERON:0001637!2.89e-14!42;UBERON:0003509!2.89e-14!42;UBERON:0004572!2.89e-14!42;UBERON:0002385!7.47e-14!63;UBERON:0001015!7.47e-14!63;UBERON:0000383!7.47e-14!63;UBERON:0001981!2.06e-13!60;UBERON:0007500!2.06e-13!60;UBERON:0004537!2.06e-13!60;UBERON:0006965!2.06e-13!60;UBERON:0004535!3.68e-13!110;UBERON:0002384!8.38e-13!375;UBERON:0001009!1.51e-11!113;UBERON:0004573!1.99e-11!33;UBERON:0004571!1.99e-11!33;UBERON:0002100!2.96e-09!216;UBERON:0000926!7.58e-08!448;UBERON:0004120!7.58e-08!448;UBERON:0006603!7.58e-08!448;UBERON:0002204!9.85e-08!167;UBERON:0003081!9.66e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.66e-10;33!UBERON:0004571;2.66e-10;33!UBERON:0001637;5.27e-10;42!UBERON:0003509;5.27e-10;42!UBERON:0004572;5.27e-10;42!UBERON:0007500;8.59e-09;56!UBERON:0001981;8.59e-09;56!UBERON:0004537;8.59e-09;56!UBERON:0000055;5.82e-08;65!UBERON:0002049;8.02e-08;75!UBERON:0007798;8.02e-08;75!UBERON:0003914;3.12e-07;74 | |||
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| ||
|short_description=p2@SEC61B | |short_description=p2@SEC61B | ||
}} | }} |
Latest revision as of 20:00, 19 September 2015
Short description: | p2@SEC61B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEC61B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000223641, ENST00000481573_5end |
EntrezGene: | SEC61B |
HGNC: | 16993 |
UniProt: | P60468 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 4.52e-34 | 441 |
multi fate stem cell | 1.90e-32 | 427 |
somatic stem cell | 2.11e-32 | 433 |
mesodermal cell | 2.51e-23 | 121 |
embryonic cell | 1.70e-20 | 250 |
muscle precursor cell | 2.37e-18 | 58 |
myoblast | 2.37e-18 | 58 |
multi-potent skeletal muscle stem cell | 2.37e-18 | 58 |
electrically responsive cell | 8.40e-18 | 61 |
electrically active cell | 8.40e-18 | 61 |
muscle cell | 1.25e-17 | 55 |
smooth muscle cell | 3.14e-17 | 43 |
smooth muscle myoblast | 3.14e-17 | 43 |
connective tissue cell | 4.73e-14 | 361 |
vascular associated smooth muscle cell | 1.39e-13 | 32 |
mesenchymal cell | 2.04e-13 | 354 |
motile cell | 2.43e-12 | 386 |
fibroblast | 1.92e-09 | 76 |
cardiocyte | 4.16e-07 | 16 |
lining cell | 4.55e-07 | 58 |
barrier cell | 4.55e-07 | 58 |
meso-epithelial cell | 7.05e-07 | 45 |
endothelial cell | 9.24e-07 | 36 |