FFCP PHASE1:Hg19::chr14:67708101..67708127,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:67708101..67708127,+
|short_description=p3@MPP5
|description=CAGE_peak_3_at_MPP5_5end
|association_with_transcript=-12bp_to_ENST00000555925,ENST0000055634...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64398 | |EntrezGene=64398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18669 | |HGNC=18669 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2B0 | |UniProt=G3V2B0 | ||
|association_with_transcript=-12bp_to_ENST00000555925,ENST00000556345_5end | |||
|cluster_id=chr14:67708101..67708127,+ | |||
|description=CAGE_peak_3_at_MPP5_5end | |||
|id=chr14:67708101..67708127,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.52e-14!115;UBERON:0001049!1.71e-12!57;UBERON:0005068!1.71e-12!57;UBERON:0006241!1.71e-12!57;UBERON:0007135!1.71e-12!57;UBERON:0003080!8.03e-12!42;UBERON:0002780!1.71e-11!41;UBERON:0001890!1.71e-11!41;UBERON:0006240!1.71e-11!41;UBERON:0002616!3.11e-11!59;UBERON:0003075!8.49e-11!86;UBERON:0007284!8.49e-11!86;UBERON:0000033!4.82e-10!123;UBERON:0000955!5.49e-10!69;UBERON:0006238!5.49e-10!69;UBERON:0002346!7.56e-10!90;UBERON:0000475!4.44e-09!365;UBERON:0000153!5.59e-09!129;UBERON:0007811!5.59e-09!129;UBERON:0003056!6.69e-09!61;UBERON:0001017!1.95e-08!82;UBERON:0002020!2.97e-08!34;UBERON:0003528!2.97e-08!34;UBERON:0005743!4.42e-08!86;UBERON:0004111!4.52e-08!241;UBERON:0001893!5.97e-08!34;UBERON:0002791!1.16e-07!33;UBERON:0000073!1.95e-07!94;UBERON:0001016!1.95e-07!94;UBERON:0001869!3.76e-07!32;UBERON:0000477!5.06e-07!286;UBERON:0000062!8.12e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.45e-08;41!UBERON:0001890;2.45e-08;41!UBERON:0000073;3.47e-07;53!UBERON:0002616;3.47e-07;53!UBERON:0003528;6.53e-07;34!UBERON:0002020;6.53e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.88e-14,114;UBERON:0001049,1.02e-12,56;UBERON:0005068,1.02e-12,56;UBERON:0006241,1.02e-12,56;UBERON:0007135,1.02e-12,56;UBERON:0000073,7.29e-12,53;UBERON:0002616,7.29e-12,53;UBERON:0002780,1.19e-11,41;UBERON:0001890,1.19e-11,41;UBERON:0003080,1.19e-11,41;UBERON:0006240,1.19e-11,41;UBERON:0010314,3.67e-10,132;UBERON:0003075,4.56e-10,82;UBERON:0007284,4.56e-10,82;UBERON:0000955,5.49e-10,68;UBERON:0006238,5.49e-10,68;UBERON:0003056,2.25e-09,61;UBERON:0002346,2.94e-09,86;UBERON:0004111,4.97e-09,240;UBERON:0001017,1.75e-08,81;UBERON:0003528,2.63e-08,34;UBERON:0002020,2.63e-08,34;UBERON:0001893,5.38e-08,34;UBERON:0001016,1.39e-07,89;UBERON:0002791,2.40e-07,32;UBERON:0010371,3.10e-07,104;UBERON:0001869,3.59e-07,32 | |||
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| ||
|short_description=p3@MPP5 | |||
}} | }} |
Latest revision as of 04:16, 25 September 2015
Short description: | p3@MPP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MPP5_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000555925, ENST00000556345_5end |
EntrezGene: | MPP5 |
HGNC: | 18669 |
UniProt: | G3V2B0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.88e-14 | 114 |
neural tube | 1.02e-12 | 56 |
neural rod | 1.02e-12 | 56 |
future spinal cord | 1.02e-12 | 56 |
neural keel | 1.02e-12 | 56 |
regional part of nervous system | 7.29e-12 | 53 |
regional part of brain | 7.29e-12 | 53 |
regional part of forebrain | 1.19e-11 | 41 |
forebrain | 1.19e-11 | 41 |
anterior neural tube | 1.19e-11 | 41 |
future forebrain | 1.19e-11 | 41 |
structure with developmental contribution from neural crest | 3.67e-10 | 132 |
neural plate | 4.56e-10 | 82 |
presumptive neural plate | 4.56e-10 | 82 |
brain | 5.49e-10 | 68 |
future brain | 5.49e-10 | 68 |
pre-chordal neural plate | 2.25e-09 | 61 |
neurectoderm | 2.94e-09 | 86 |
anatomical conduit | 4.97e-09 | 240 |
central nervous system | 1.75e-08 | 81 |
brain grey matter | 2.63e-08 | 34 |
gray matter | 2.63e-08 | 34 |
telencephalon | 5.38e-08 | 34 |
nervous system | 1.39e-07 | 89 |
regional part of telencephalon | 2.40e-07 | 32 |
ecto-epithelium | 3.10e-07 | 104 |
cerebral hemisphere | 3.59e-07 | 32 |