FFCP PHASE1:Hg19::chr3:119338227..119338252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:119338227..119338252,+ | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_at_chr3:119338227..119338252,+ | |description=CAGE_peak_at_chr3:119338227..119338252,+ | ||
|id=chr3:119338227..119338252,+ | |id=chr3:119338227..119338252,+ | ||
|ontology_enrichment_celltype=CL:0002586!2.36e-10!3;CL:0000149!5.64e-08!4 | |ontology_enrichment_celltype=CL:0002586!2.36e-10!3;CL:0000149!5.64e-08!4 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.53e-07;31 | |||
|ontology_enrichment_disease=DOID:630!2.89e-08!1;DOID:0050177!2.89e-08!1;DOID:0050427!2.89e-08!1;DOID:178!3.83e-08!1;DOID:326!3.83e-08!1;DOID:3978!3.83e-08!1;DOID:3394!3.83e-08!1;DOID:5844!3.83e-08!1 | |ontology_enrichment_disease=DOID:630!2.89e-08!1;DOID:0050177!2.89e-08!1;DOID:0050427!2.89e-08!1;DOID:178!3.83e-08!1;DOID:326!3.83e-08!1;DOID:3978!3.83e-08!1;DOID:3394!3.83e-08!1;DOID:5844!3.83e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:5409;1.00e-13;4!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.00e-13,4;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.83e-18!115;UBERON:0000966!4.98e-13!5;UBERON:0005388!4.98e-13!5;UBERON:0001802!4.98e-13!5;UBERON:0001896!2.15e-10!3;UBERON:0005290!2.15e-10!3;UBERON:0010096!2.15e-10!3;UBERON:0001781!2.36e-10!3;UBERON:0001782!2.36e-10!3;UBERON:0005424!2.36e-10!3;UBERON:0005418!1.13e-08!1;UBERON:0001389!1.13e-08!1;UBERON:0000026!1.13e-08!1;UBERON:0008784!1.13e-08!1;UBERON:0006058!1.13e-08!1;UBERON:0003663!1.13e-08!1;UBERON:0001383!1.13e-08!1;UBERON:0004256!1.13e-08!1;UBERON:0002529!1.13e-08!1;UBERON:0004708!1.13e-08!1;UBERON:0002101!1.13e-08!1;UBERON:0004709!1.13e-08!1;UBERON:0003661!1.13e-08!1;UBERON:0002471!1.13e-08!1;UBERON:0004357!1.13e-08!1;UBERON:0009872!1.13e-08!1;UBERON:0004347!1.13e-08!1;UBERON:0005420!1.13e-08!1;UBERON:0005732!1.13e-08!1;UBERON:0006057!1.13e-08!1;UBERON:0000978!1.13e-08!1;UBERON:0002103!1.13e-08!1;UBERON:0001665!1.13e-08!1;UBERON:0003823!1.13e-08!1;UBERON:0000154!1.13e-08!1;UBERON:0005733!1.13e-08!1;UBERON:0005730!1.13e-08!1;UBERON:0007029!1.88e-08!1;UBERON:0003296!4.12e-08!4;UBERON:0010133!4.12e-08!4;UBERON:0002336!6.24e-08!1;UBERON:0001018!6.24e-08!1;UBERON:0002473!6.24e-08!1;UBERON:0005340!6.24e-08!1;UBERON:0002316!6.24e-08!1;UBERON:0003544!6.24e-08!1;UBERON:0001020!6.24e-08!1;UBERON:0005970!6.24e-08!1;UBERON:0002437!6.24e-08!1;UBERON:0000020!2.38e-07!23;UBERON:0001032!4.93e-07!24;UBERON:0004456!4.93e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.12e-50;1!UBERON:0000026;5.12e-50;1!UBERON:0008784;5.12e-50;1!UBERON:0006058;5.12e-50;1!UBERON:0003663;5.12e-50;1!UBERON:0004256;5.12e-50;1!UBERON:0004708;5.12e-50;1!UBERON:0002101;5.12e-50;1!UBERON:0004709;5.12e-50;1!UBERON:0002529;5.12e-50;1!UBERON:0010538;5.12e-50;1!UBERON:0003661;5.12e-50;1!UBERON:0010890;5.12e-50;1!UBERON:0002471;5.12e-50;1!UBERON:0001383;5.12e-50;1!UBERON:0010758;5.12e-50;1!UBERON:0010707;5.12e-50;1!UBERON:0000978;5.12e-50;1!UBERON:0002103;5.12e-50;1!UBERON:0001665;5.12e-50;1!UBERON:0003823;5.12e-50;1!UBERON:0000154;5.12e-50;1!UBERON:0010709;5.12e-50;1!UBERON:0005090;8.10e-26;2!UBERON:0001630;8.10e-26;2!UBERON:0001896;1.03e-17;3!UBERON:0005290;1.03e-17;3!UBERON:0001134;1.89e-13;16!UBERON:0002036;1.89e-13;16!UBERON:0002298;1.50e-09;6!UBERON:0002385;1.15e-07;31!UBERON:0001015;1.15e-07;31!UBERON:0000383;1.15e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.99e-50,1;UBERON:0001389,3.99e-50,1;UBERON:0000026,3.99e-50,1;UBERON:0008784,3.99e-50,1;UBERON:0006058,3.99e-50,1;UBERON:0003663,3.99e-50,1;UBERON:0004256,3.99e-50,1;UBERON:0004708,3.99e-50,1;UBERON:0002101,3.99e-50,1;UBERON:0004709,3.99e-50,1;UBERON:0002529,3.99e-50,1;UBERON:0010538,3.99e-50,1;UBERON:0003661,3.99e-50,1;UBERON:0010890,3.99e-50,1;UBERON:0002471,3.99e-50,1;UBERON:0001383,3.99e-50,1;UBERON:0004357,3.99e-50,1;UBERON:0004347,3.99e-50,1;UBERON:0005420,3.99e-50,1;UBERON:0005732,3.99e-50,1;UBERON:0010758,3.99e-50,1;UBERON:0010707,3.99e-50,1;UBERON:0000978,3.99e-50,1;UBERON:0002103,3.99e-50,1;UBERON:0001665,3.99e-50,1;UBERON:0003823,3.99e-50,1;UBERON:0000154,3.99e-50,1;UBERON:0010709,3.99e-50,1;UBERON:0005733,3.99e-50,1;UBERON:0005730,3.99e-50,1;UBERON:0005090,7.14e-26,2;UBERON:0001630,7.14e-26,2;UBERON:0001896,1.12e-17,3;UBERON:0005290,1.12e-17,3;UBERON:0010096,1.12e-17,3;UBERON:0002298,1.57e-09,6 | |||
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|short_description=p@chr3:119338227..119338252,+ | |short_description=p@chr3:119338227..119338252,+ | ||
}} | }} |
Latest revision as of 14:48, 29 July 2015
Short description: | p@chr3:119338227..119338252, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:119338227..119338252, + |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.99e-50 | 1 |
soleus muscle | 3.99e-50 | 1 |
appendage | 3.99e-50 | 1 |
lower limb segment | 3.99e-50 | 1 |
multi-limb segment region | 3.99e-50 | 1 |
hindlimb muscle | 3.99e-50 | 1 |
hindlimb zeugopod muscle | 3.99e-50 | 1 |
paired limb/fin | 3.99e-50 | 1 |
limb | 3.99e-50 | 1 |
pelvic appendage | 3.99e-50 | 1 |
limb segment | 3.99e-50 | 1 |
paired limb/fin segment | 3.99e-50 | 1 |
limb muscle | 3.99e-50 | 1 |
pelvic complex muscle | 3.99e-50 | 1 |
zeugopod | 3.99e-50 | 1 |
muscle of leg | 3.99e-50 | 1 |
paired limb/fin bud | 3.99e-50 | 1 |
limb bud | 3.99e-50 | 1 |
pelvic appendage bud | 3.99e-50 | 1 |
limb/fin field | 3.99e-50 | 1 |
subdivision of organism along appendicular axis | 3.99e-50 | 1 |
appendage girdle complex | 3.99e-50 | 1 |
leg | 3.99e-50 | 1 |
hindlimb | 3.99e-50 | 1 |
triceps surae | 3.99e-50 | 1 |
hindlimb zeugopod | 3.99e-50 | 1 |
posterior region of body | 3.99e-50 | 1 |
pelvic complex | 3.99e-50 | 1 |
limb field | 3.99e-50 | 1 |
hindlimb/pelvic fin field | 3.99e-50 | 1 |
muscle structure | 7.14e-26 | 2 |
muscle organ | 7.14e-26 | 2 |
medulla oblongata | 1.12e-17 | 3 |
myelencephalon | 1.12e-17 | 3 |
future myelencephalon | 1.12e-17 | 3 |
brainstem | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.00e-13 | 4 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |