FFCP PHASE1:Hg19::chrX:47444394..47444423,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:47444394..47444423,- | |||
|coexpression_cluster_id=C609 | |||
|description=CAGE_peak_at_chrX:47444394..47444423,- | |description=CAGE_peak_at_chrX:47444394..47444423,- | ||
|id=chrX:47444394..47444423,- | |id=chrX:47444394..47444423,- | ||
|ontology_enrichment_celltype=CL:0000055!1.12e-25!180;CL:0000048!1.76e-21!430;CL:0000723!1.03e-20!436;CL:0000034!3.40e-19!444;CL:0002371!3.06e-18!591;CL:0000680!1.55e-16!57;CL:0000056!1.55e-16!57;CL:0000355!1.55e-16!57;CL:0000187!1.55e-15!54;CL:0000183!3.02e-15!59;CL:0000144!3.20e-15!625;CL:0000057!3.56e-15!75;CL:0000548!1.08e-13!679;CL:0000004!1.08e-13!679;CL:0000255!1.08e-13!679;CL:0000192!1.91e-13!42;CL:0000514!1.91e-13!42;CL:0000012!7.51e-13!682;CL:0000393!2.20e-12!60;CL:0000211!2.20e-12!60;CL:0000359!3.87e-11!32;CL:0002320!5.21e-11!365;CL:0000134!6.25e-10!358;CL:0002334!1.28e-08!12;CL:0000219!7.57e-08!390;CL:0000222!5.81e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.12e-25!180;CL:0000048!1.76e-21!430;CL:0000723!1.03e-20!436;CL:0000034!3.40e-19!444;CL:0002371!3.06e-18!591;CL:0000680!1.55e-16!57;CL:0000056!1.55e-16!57;CL:0000355!1.55e-16!57;CL:0000187!1.55e-15!54;CL:0000183!3.02e-15!59;CL:0000144!3.20e-15!625;CL:0000057!3.56e-15!75;CL:0000548!1.08e-13!679;CL:0000004!1.08e-13!679;CL:0000255!1.08e-13!679;CL:0000192!1.91e-13!42;CL:0000514!1.91e-13!42;CL:0000012!7.51e-13!682;CL:0000393!2.20e-12!60;CL:0000211!2.20e-12!60;CL:0000359!3.87e-11!32;CL:0002320!5.21e-11!365;CL:0000134!6.25e-10!358;CL:0002334!1.28e-08!12;CL:0000219!7.57e-08!390;CL:0000222!5.81e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.41e-11;32!CL:0002334;1.25e-10;12!CL:0000192;6.23e-10;43!CL:0000134;1.05e-09;55!CL:0000187;3.96e-09;55!CL:0000723;1.37e-08;61!CL:0002494;2.03e-08;16!CL:0000048;3.41e-08;58!CL:0000393;9.54e-08;61!CL:0000211;9.54e-08;61!CL:0000860;1.98e-07;33!CL:0002057;1.98e-07;33!CL:0000499;3.29e-07;28!CL:0002320;4.29e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.21e-27,427;CL:0000723,1.34e-26,433;CL:0000034,9.68e-25,441;CL:0000680,6.39e-17,58;CL:0000056,6.39e-17,58;CL:0000355,6.39e-17,58;CL:0000187,1.09e-15,55;CL:0000057,1.54e-15,76;CL:0002320,2.38e-15,361;CL:0000134,4.06e-14,354;CL:0000393,4.75e-13,61;CL:0000211,4.75e-13,61;CL:0000192,4.80e-13,43;CL:0000514,4.80e-13,43;CL:0000359,1.26e-11,32;CL:0000219,1.05e-10,386;CL:0002334,1.40e-10,12;CL:0002494,1.59e-08,16;CL:0000499,4.76e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;6.23e-10;43!CL:0000355;2.84e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!1.85e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.81e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.56e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.74e-16!448;UBERON:0004120!1.74e-16!448;UBERON:0006603!1.74e-16!448;UBERON:0004290!6.04e-16!70;UBERON:0000914!1.24e-15!83;UBERON:0002329!1.24e-15!83;UBERON:0003077!1.24e-15!83;UBERON:0003059!1.24e-15!83;UBERON:0007282!1.24e-15!83;UBERON:0009618!1.24e-15!83;UBERON:0007285!1.24e-15!83;UBERON:0002204!3.07e-15!167;UBERON:0001134!2.11e-14!61;UBERON:0002036!2.11e-14!61;UBERON:0003082!2.11e-14!61;UBERON:0002385!1.05e-13!63;UBERON:0001015!1.05e-13!63;UBERON:0000383!1.05e-13!63;UBERON:0000486!1.75e-13!82;UBERON:0005256!1.83e-11!143;UBERON:0002384!8.01e-11!375;UBERON:0002100!1.58e-09!216;UBERON:0004872!2.37e-09!84;UBERON:0001637!1.06e-08!42;UBERON:0003509!1.06e-08!42;UBERON:0004572!1.06e-08!42;UBERON:0000468!7.48e-08!659;UBERON:0004573!9.40e-08!33;UBERON:0004571!9.40e-08!33;UBERON:0000490!1.56e-07!138;UBERON:0004535!2.23e-07!110;UBERON:0001009!2.32e-07!113;UBERON:0001013!2.57e-07!14;UBERON:0003081!3.60e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.18e-08;14!UBERON:0004573;2.57e-08;33!UBERON:0004571;2.57e-08;33!UBERON:0001637;2.95e-07;42!UBERON:0003509;2.95e-07;42!UBERON:0004572;2.95e-07;42!UBERON:0000948;9.94e-07;22 | |||
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| ||
|short_description=p@chrX:47444394..47444423,- | |short_description=p@chrX:47444394..47444423,- | ||
}} | }} |
Latest revision as of 08:24, 1 August 2015
Short description: | p@chrX:47444394..47444423, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:47444394..47444423, - |
Coexpression cluster: | C609_Smooth_mesenchymal_Preadipocyte_Cardiac_Fibroblast_Osteoblast_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.21e-27 | 427 |
somatic stem cell | 1.34e-26 | 433 |
stem cell | 9.68e-25 | 441 |
muscle precursor cell | 6.39e-17 | 58 |
myoblast | 6.39e-17 | 58 |
multi-potent skeletal muscle stem cell | 6.39e-17 | 58 |
muscle cell | 1.09e-15 | 55 |
fibroblast | 1.54e-15 | 76 |
connective tissue cell | 2.38e-15 | 361 |
mesenchymal cell | 4.06e-14 | 354 |
electrically responsive cell | 4.75e-13 | 61 |
electrically active cell | 4.75e-13 | 61 |
smooth muscle cell | 4.80e-13 | 43 |
smooth muscle myoblast | 4.80e-13 | 43 |
vascular associated smooth muscle cell | 1.26e-11 | 32 |
motile cell | 1.05e-10 | 386 |
preadipocyte | 1.40e-10 | 12 |
cardiocyte | 1.59e-08 | 16 |
stromal cell | 4.76e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.56e-09 | 14 |