FFCP PHASE1:Hg19::chrX:73051003..73051017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12810 | |HGNC=12810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENST00000445814_5end | |association_with_transcript=27bp_to_ENST00000445814_5end | ||
|cluster_id=chrX:73051003..73051017,- | |||
|coexpression_cluster_id=C639 | |||
|description=CAGE_peak_6_at_XIST_5end | |description=CAGE_peak_6_at_XIST_5end | ||
|id=chrX:73051003..73051017,- | |id=chrX:73051003..73051017,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.29e-19!57;UBERON:0005068!7.29e-19!57;UBERON:0006241!7.29e-19!57;UBERON:0007135!7.29e-19!57;UBERON:0002616!4.26e-16!59;UBERON:0003080!3.35e-14!42;UBERON:0003075!5.08e-14!86;UBERON:0007284!5.08e-14!86;UBERON:0002780!5.55e-14!41;UBERON:0001890!5.55e-14!41;UBERON:0006240!5.55e-14!41;UBERON:0002346!9.59e-14!90;UBERON:0001017!9.85e-14!82;UBERON:0005743!2.64e-13!86;UBERON:0002020!1.03e-12!34;UBERON:0003528!1.03e-12!34;UBERON:0001893!9.26e-12!34;UBERON:0002791!9.62e-12!33;UBERON:0000955!1.97e-11!69;UBERON:0006238!1.97e-11!69;UBERON:0003056!2.15e-11!61;UBERON:0001869!4.96e-11!32;UBERON:0000073!5.01e-11!94;UBERON:0001016!5.01e-11!94;UBERON:0007023!2.36e-10!115;UBERON:0000956!6.33e-08!25;UBERON:0000203!6.33e-08!25;UBERON:0002619!7.14e-08!22;UBERON:0000033!2.56e-07!123;UBERON:0002420!3.28e-07!9;UBERON:0007245!3.28e-07!9;UBERON:0010009!3.28e-07!9;UBERON:0010011!3.28e-07!9;UBERON:0000454!3.28e-07!9;UBERON:0000924!4.02e-07!173;UBERON:0006601!4.02e-07!173;UBERON:0004121!4.13e-07!169;UBERON:0000153!7.04e-07!129;UBERON:0007811!7.04e-07!129;UBERON:0002308!9.52e-07!9;UBERON:0000125!9.52e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.07e-10;34!UBERON:0002020;5.07e-10;34!UBERON:0000073;1.32e-09;53!UBERON:0002616;1.32e-09;53!UBERON:0002791;1.34e-09;32!UBERON:0002780;3.70e-09;41!UBERON:0001890;3.70e-09;41!UBERON:0001893;9.78e-09;34!UBERON:0001869;1.57e-08;32!UBERON:0002420;2.20e-08;9!UBERON:0007245;2.20e-08;9!UBERON:0010009;2.20e-08;9!UBERON:0010011;2.20e-08;9!UBERON:0000454;2.20e-08;9!UBERON:0000125;6.36e-08;9!UBERON:0002308;6.36e-08;9!UBERON:0002619;8.22e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.14e-16,56;UBERON:0005068,1.14e-16,56;UBERON:0006241,1.14e-16,56;UBERON:0007135,1.14e-16,56;UBERON:0000073,1.44e-14,53;UBERON:0002616,1.44e-14,53;UBERON:0001017,3.18e-13,81;UBERON:0002780,5.50e-12,41;UBERON:0001890,5.50e-12,41;UBERON:0003080,5.50e-12,41;UBERON:0006240,5.50e-12,41;UBERON:0003528,8.41e-12,34;UBERON:0002020,8.41e-12,34;UBERON:0003075,1.24e-11,82;UBERON:0007284,1.24e-11,82;UBERON:0001016,1.63e-11,89;UBERON:0002346,3.81e-11,86;UBERON:0002791,1.57e-10,32;UBERON:0000955,2.96e-10,68;UBERON:0006238,2.96e-10,68;UBERON:0010371,9.04e-10,104;UBERON:0001893,1.49e-09,34;UBERON:0001869,3.26e-09,32;UBERON:0002420,1.99e-08,9;UBERON:0007245,1.99e-08,9;UBERON:0010009,1.99e-08,9;UBERON:0010011,1.99e-08,9;UBERON:0000454,1.99e-08,9;UBERON:0003056,2.77e-08,61;UBERON:0000125,7.98e-08,9;UBERON:0002308,7.98e-08,9;UBERON:0002619,9.10e-07,22 | |||
|phase1_expression=1.81678379270557,3.63970890614671,1.26858963686374,1.0007329835313,0,1.74467704820074,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.572471974262113,2.05311637609326,0,1.91033514369878,1.47781061009902,1.02324015707783,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29557466407592,0,1.45398238779565,1.88937971844405,0,1.62700325833979,1.23350366406548,0,2.8769239232215,2.81776777182011,0,1.37898272294647,1.93645405075148,0,1.50593871634084,0.818718450173537,0,0.612167784741805,1.60464513538047,0,0.659702600373432,1.59570926097305,0,5.5139755339431,2.26954089876456,0,4.52247597462138,4.69334626578181,0,1.21079900526674,1.47311054395026,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.18455444504853,1.77901850772711,0,0,0,0.661044872784862,1.90810750907073,1.70763890732835,5.87237189370939,0,2.64342657158052,0,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91139248594458,1.30216690771284,0.950452044448374,0,0,1.24930726552346,1.89421801635213,1.64225599384209,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,0,2.89854792787316,0.654895377488563,0,0,2.27183175558278,0.870648686496336,0,2.38490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0.549605231791222,0,0,0,0.993943903390637,0.633152558322899,0,2.86836620748814,1.41867352879343,0,0,0.74000264525148,0,0,0,0,0,0.70296429550139,0,0,1.04614076386261,0.939475989150119,0,0,0,0,0,0,0,0.910161361938026,0,0,0.750711119231785,0,0.877955241761676,0,0,0,5.91985797773244,4.69826255400848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,1.09098448236334,0,0,0,0,0,0,0,0,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,15.2106041786197,0,0.590789906681404,0,0,1.02940686179115,0,0,0.804231779293047,0,0.325808305310325,0,1.44331342025273,0.579652024875384,0,0,0,0,0,0,0,0.936017060556951,0,0,0.503946384596579,0,1.34337784054272,0.871901815541886,0,0,1.67292024625129,0.621984346622316,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0.845302752556,1.86156681609409,1.04007436911366,0,0,0,1.71573592389777,0,0,0.65147236858747,0.710783897485092,0,0.602878754119172,0,1.3996218765488,0,0,0,0,0,0,2.17171960001369,0,0.716243852959582,0.896681151948218,0,0,0,0.508189248444927,3.90419561572865,0,2.01019518401218,0,0,0,0.414415513436035,0,0,0,0,2.67643483195743,0,0,0,0,0,0,0.368738337083406,0,0,0,1.6541442089831,0,0,0,0,0,1.48864684691266,3.99001130548962,1.96462066103151,0.768834895534206,0,0,4.45254199334973,1.54209693802656,1.24293207719189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0.650756789328606,0.721287081534056,2.83865340936865,2.31026599777646,0,0,0,1.16004861950546,1.23238893691716,1.38153307253517,0,0,3.48040065394148,1.87498580315422,0.890320356467374,1.4875642382488,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,1.58189712359363,0,0,1.28381696410176,0,0,0,4.66712950551293,1.88499843753098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.459446800413919,0,0.764637207142375,3.98753031021914,0,0,1.29694662238543,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0.851692475380653,0,0,0,0,0,0,0,0,1.33228787199128,0,0,0.879049075631364,0.728163130497081,0,0,0,0,0,3.97659059106519,3.51673541026282,2.00355669041231,0,0,0.796991953004279,0,3.02319297425131,0,0,1.86623752597084,0,0,0,0.690503839458535,0,0,0,0.278304294485554,0,0,0.524759999977174,0.724999575434793,0,0,0,0,0,0,2.65722415744152,5.18564686089254,7.62908681585416,4.86548743697388,2.06883333267483,0,0,1.11538995422883,1.38510465306835,7.97594390929008,0.23056390438806,0,0,0.957003479195758,0.366390373607449,1.06606955203727,0,1.8837630767403,0,0.451191321234361,0.588187602953219,0.671286347903371,0.948768663620925,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0,0,8.87611008728421,1.26373159256976,11.8755501337449,14.9310995612036,0.664653872707185,1.98595173525299,0,1.19472429772959,0,3.60554149834161,0,0.0979923974143777,0,0,0,0.290268993867255,0.219267951258557,0.246346371159628,0.290967049465258,1.235585773681,1.80784592624426,0,0,0.696418755514666,5.08433595110488,0,0,0.19980960958213,4.17862209746907,0,0,0,0,0,0,0,0,0,2.40168115483916,2.73810757783986,0,0.429765441419957,0,0,0.229160424011684,0,2.1964690054889,1.71690419254628,0,0.268733889946905,1.80149941771202,0,0,0,0,0,0,3.97614844904652,4.08610218334727,0,2.61324929534744,2.9080823662043,0.674921674654501,5.41661368190565,0.485996453264197,3.01891218839339,0.788057072991982,0.262272940674991,0,0,0,0,0,1.77987976358325,1.08599920350743,1.72844298240254,2.93928624098468,0,0,12.7791016339066,0,0.293104467356165,0,1.16354660725395,3.83474545053801,0,0,0.427149650270779,0,0,0,2.96417447846916,0,0,0,0,0.306345576763462,0,0,0,5.49118192058834,2.1282458220105,2.29363678276028,2.21858103073705,0.1241928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| 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| ||
|short_description=p6@XIST | |short_description=p6@XIST | ||
}} | }} |
Latest revision as of 09:07, 16 September 2015
Short description: | p6@XIST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_XIST_5end |
Coexpression cluster: | C639_parietal_embryonic_medial_temporal_cerebellum_skin_spinal |
Association with transcript: | 27bp_to_ENST00000445814_5end |
EntrezGene: | NA |
HGNC: | 12810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.14e-16 | 56 |
neural rod | 1.14e-16 | 56 |
future spinal cord | 1.14e-16 | 56 |
neural keel | 1.14e-16 | 56 |
regional part of nervous system | 1.44e-14 | 53 |
regional part of brain | 1.44e-14 | 53 |
central nervous system | 3.18e-13 | 81 |
regional part of forebrain | 5.50e-12 | 41 |
forebrain | 5.50e-12 | 41 |
anterior neural tube | 5.50e-12 | 41 |
future forebrain | 5.50e-12 | 41 |
brain grey matter | 8.41e-12 | 34 |
gray matter | 8.41e-12 | 34 |
neural plate | 1.24e-11 | 82 |
presumptive neural plate | 1.24e-11 | 82 |
nervous system | 1.63e-11 | 89 |
neurectoderm | 3.81e-11 | 86 |
regional part of telencephalon | 1.57e-10 | 32 |
brain | 2.96e-10 | 68 |
future brain | 2.96e-10 | 68 |
ecto-epithelium | 9.04e-10 | 104 |
telencephalon | 1.49e-09 | 34 |
cerebral hemisphere | 3.26e-09 | 32 |
basal ganglion | 1.99e-08 | 9 |
nuclear complex of neuraxis | 1.99e-08 | 9 |
aggregate regional part of brain | 1.99e-08 | 9 |
collection of basal ganglia | 1.99e-08 | 9 |
cerebral subcortex | 1.99e-08 | 9 |
pre-chordal neural plate | 2.77e-08 | 61 |
neural nucleus | 7.98e-08 | 9 |
nucleus of brain | 7.98e-08 | 9 |
regional part of cerebral cortex | 9.10e-07 | 22 |