FFCP PHASE1:Hg19::chr3:184050382..184050388,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:184050382..184050388,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr3:184050382..184050388,+ | |description=CAGE_peak_at_chr3:184050382..184050388,+ | ||
|id=chr3:184050382..184050388,+ | |id=chr3:184050382..184050388,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.08e-22!254;CL:0000076!1.34e-13!62;CL:0002368!5.20e-13!13;CL:0002076!1.20e-11!43;CL:0000220!8.56e-11!246;CL:0002159!1.15e-10!13;CL:0002321!1.48e-10!248;CL:0002202!3.24e-08!9;CL:0002632!3.24e-08!9;CL:0000548!6.85e-08!679;CL:0000004!6.85e-08!679;CL:0000255!6.85e-08!679;CL:0000012!1.08e-07!682;CL:0000223!1.76e-07!59;CL:0000244!2.85e-07!4;CL:0000731!2.85e-07!4 | |ontology_enrichment_celltype=CL:0000066!2.08e-22!254;CL:0000076!1.34e-13!62;CL:0002368!5.20e-13!13;CL:0002076!1.20e-11!43;CL:0000220!8.56e-11!246;CL:0002159!1.15e-10!13;CL:0002321!1.48e-10!248;CL:0002202!3.24e-08!9;CL:0002632!3.24e-08!9;CL:0000548!6.85e-08!679;CL:0000004!6.85e-08!679;CL:0000255!6.85e-08!679;CL:0000012!1.08e-07!682;CL:0000223!1.76e-07!59;CL:0000244!2.85e-07!4;CL:0000731!2.85e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;6.98e-29;13!CL:0000244;9.13e-25;4!CL:0000731;9.13e-25;4!CL:0002202;4.52e-24;9!CL:0002632;4.52e-24;9!CL:0002328;4.62e-19;3!CL:0000082;3.95e-11;19!CL:0002159;6.97e-11;14!CL:0002076;4.36e-10;42!CL:0000307;5.49e-09;3!CL:0002621;5.49e-09;3!CL:0002327;3.90e-07;4!CL:0000362;7.98e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,5.87e-29,13;CL:0000244,1.29e-24,4;CL:0000731,1.29e-24,4;CL:0002202,3.44e-24,9;CL:0002632,3.44e-24,9;CL:0002328,1.68e-19,3;CL:0000066,6.43e-15,253;CL:0002076,9.60e-13,42;CL:0000082,3.12e-11,19;CL:0002159,6.71e-11,14;CL:0002621,5.51e-09,3;CL:0000068,8.23e-09,3;CL:0000069,8.23e-09,3;CL:0000307,8.23e-09,3;CL:0000377,8.23e-09,3;CL:0000223,9.44e-09,58;CL:0002327,3.11e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;5.49e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!7.48e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.61e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004807!5.48e-07!28;UBERON:0002185!7.31e-07!4 | |ontology_enrichment_uberon=UBERON:0004807!5.48e-07!28;UBERON:0002185!7.31e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.32e-20;5!UBERON:0004815;4.62e-19;3!UBERON:0002031;4.62e-19;3!UBERON:0000486;8.77e-18;12!UBERON:0005911;2.13e-17;36!UBERON:0004807;1.33e-16;22!UBERON:0005910;1.38e-16;6!UBERON:0007196;3.05e-14;15!UBERON:0001558;3.05e-14;15!UBERON:0002185;1.18e-11;5!UBERON:0004802;3.95e-11;19!UBERON:0000115;3.95e-11;19!UBERON:0005178;8.23e-10;34!UBERON:0002224;8.23e-10;34!UBERON:0002048;1.55e-09;22!UBERON:0000117;1.55e-09;22!UBERON:0000171;1.55e-09;22!UBERON:0000170;1.55e-09;22!UBERON:0000065;3.80e-09;44!UBERON:0005181;4.98e-09;35!UBERON:0001949;5.49e-09;3!UBERON:0000485;1.85e-08;7!UBERON:0000072;1.18e-07;37!UBERON:0001911;3.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.65e-20,5;UBERON:0004815,1.68e-19,3;UBERON:0002031,1.68e-19,3;UBERON:0005910,1.73e-16,6;UBERON:0007196,2.60e-14,15;UBERON:0001558,2.60e-14,15;UBERON:0004807,6.89e-13,28;UBERON:0002185,6.46e-12,5;UBERON:0004802,3.12e-11,19;UBERON:0000115,3.12e-11,19;UBERON:0005178,2.39e-10,34;UBERON:0002224,2.39e-10,34;UBERON:0005181,5.09e-10,35;UBERON:0002048,1.27e-09,22;UBERON:0000117,1.27e-09,22;UBERON:0000171,1.27e-09,22;UBERON:0000170,1.27e-09,22;UBERON:0005597,1.27e-09,22;UBERON:0000118,1.27e-09,22;UBERON:0005153,1.39e-09,37;UBERON:0000065,1.65e-09,54;UBERON:0001004,1.70e-09,74;UBERON:0005157,3.32e-09,47;UBERON:0008947,3.89e-09,38;UBERON:0003258,3.89e-09,38;UBERON:0001949,5.51e-09,3;UBERON:0005911,1.96e-08,82;UBERON:0000076,1.89e-07,8;UBERON:0001911,3.11e-07,4;UBERON:0005333,3.11e-07,4;UBERON:0008425,3.11e-07,4;UBERON:0005311,3.11e-07,4;UBERON:0000072,3.63e-07,47;UBERON:0000485,8.16e-07,9 | |||
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| ||
|short_description=p@chr3:184050382..184050388,+ | |short_description=p@chr3:184050382..184050388,+ | ||
}} | }} |
Latest revision as of 18:53, 29 July 2015
Short description: | p@chr3:184050382..184050388, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:184050382..184050388, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 5.87e-29 | 13 |
transitional epithelial cell | 1.29e-24 | 4 |
urothelial cell | 1.29e-24 | 4 |
epithelial cell of tracheobronchial tree | 3.44e-24 | 9 |
epithelial cell of lower respiratory tract | 3.44e-24 | 9 |
bronchial epithelial cell | 1.68e-19 | 3 |
epithelial cell | 6.43e-15 | 253 |
endo-epithelial cell | 9.60e-13 | 42 |
epithelial cell of lung | 3.12e-11 | 19 |
general ecto-epithelial cell | 6.71e-11 | 14 |
gingival epithelial cell | 5.51e-09 | 3 |
duct epithelial cell | 8.23e-09 | 3 |
branched duct epithelial cell | 8.23e-09 | 3 |
tracheal epithelial cell | 8.23e-09 | 3 |
tracheoblast | 8.23e-09 | 3 |
endodermal cell | 9.44e-09 | 58 |
mammary gland epithelial cell | 3.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 9.65e-20 | 5 |
lower respiratory tract epithelium | 1.68e-19 | 3 |
epithelium of bronchus | 1.68e-19 | 3 |
transitional epithelium | 1.73e-16 | 6 |
tracheobronchial tree | 2.60e-14 | 15 |
lower respiratory tract | 2.60e-14 | 15 |
respiratory system epithelium | 6.89e-13 | 28 |
bronchus | 6.46e-12 | 5 |
respiratory tract epithelium | 3.12e-11 | 19 |
lung epithelium | 3.12e-11 | 19 |
thoracic cavity element | 2.39e-10 | 34 |
thoracic cavity | 2.39e-10 | 34 |
thoracic segment organ | 5.09e-10 | 35 |
lung | 1.27e-09 | 22 |
respiratory tube | 1.27e-09 | 22 |
respiration organ | 1.27e-09 | 22 |
pair of lungs | 1.27e-09 | 22 |
lung primordium | 1.27e-09 | 22 |
lung bud | 1.27e-09 | 22 |
epithelial bud | 1.39e-09 | 37 |
respiratory tract | 1.65e-09 | 54 |
respiratory system | 1.70e-09 | 74 |
epithelial fold | 3.32e-09 | 47 |
respiratory primordium | 3.89e-09 | 38 |
endoderm of foregut | 3.89e-09 | 38 |
gingival epithelium | 5.51e-09 | 3 |
endo-epithelium | 1.96e-08 | 82 |
external ectoderm | 1.89e-07 | 8 |
mammary gland | 3.11e-07 | 4 |
mammary bud | 3.11e-07 | 4 |
mammary ridge | 3.11e-07 | 4 |
mammary placode | 3.11e-07 | 4 |
segment of respiratory tract | 3.63e-07 | 47 |
simple columnar epithelium | 8.16e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.61e-07 | 1 |