FFCP PHASE1:Hg19::chr4:174451370..174451387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9464 | |EntrezGene=9464 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4808 | |HGNC=4808 | ||
|TSSclassifier=strong | |||
|UniProt=P61296,B3KV85,B6ECG9 | |UniProt=P61296,B3KV85,B6ECG9 | ||
|association_with_transcript=0bp_to_ENST00000359562,ENST00000535864,NM_021973,uc003ith.1_5end | |association_with_transcript=0bp_to_ENST00000359562,ENST00000535864,NM_021973,uc003ith.1_5end | ||
|cluster_id=chr4:174451370..174451387,- | |||
|coexpression_cluster_id=C4394 | |||
|description=CAGE_peak_1_at_HAND2_5end | |description=CAGE_peak_1_at_HAND2_5end | ||
|id=chr4:174451370..174451387,- | |id=chr4:174451370..174451387,- | ||
|ontology_enrichment_celltype=CL:0000055!4.93e-20!180;CL:0000187!3.47e-15!54;CL:0000680!1.24e-14!57;CL:0000056!1.24e-14!57;CL:0000355!1.24e-14!57;CL:0000183!2.07e-13!59;CL:0000192!2.48e-13!42;CL:0000514!2.48e-13!42;CL:0000393!2.86e-12!60;CL:0000211!2.86e-12!60;CL:0000057!1.01e-09!75;CL:0000359!1.71e-09!32;CL:0002494!8.75e-08!16;CL:0000222!2.87e-07!119 | |ontology_enrichment_celltype=CL:0000055!4.93e-20!180;CL:0000187!3.47e-15!54;CL:0000680!1.24e-14!57;CL:0000056!1.24e-14!57;CL:0000355!1.24e-14!57;CL:0000183!2.07e-13!59;CL:0000192!2.48e-13!42;CL:0000514!2.48e-13!42;CL:0000393!2.86e-12!60;CL:0000211!2.86e-12!60;CL:0000057!1.01e-09!75;CL:0000359!1.71e-09!32;CL:0002494!8.75e-08!16;CL:0000222!2.87e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.08e-10;19!CL:0000192;3.57e-10;43!CL:0000359;6.29e-09;32!CL:0002494;1.36e-08;16!CL:0000187;5.98e-08;55!CL:0000134;6.92e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,2.58e-14,55;CL:0000192,1.55e-13,43;CL:0000514,1.55e-13,43;CL:0000680,2.37e-13,58;CL:0000056,2.37e-13,58;CL:0000355,2.37e-13,58;CL:0000393,2.03e-11,61;CL:0000211,2.03e-11,61;CL:0000057,4.47e-11,76;CL:0000349,1.07e-10,19;CL:0000359,1.19e-09,32;CL:0002494,1.20e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000514;3.57e-10;43!CL:0000355;8.90e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.69e-18!84;UBERON:0002385!2.12e-15!63;UBERON:0001015!2.12e-15!63;UBERON:0000383!2.12e-15!63;UBERON:0007100!6.18e-15!27;UBERON:0001134!2.67e-14!61;UBERON:0002036!2.67e-14!61;UBERON:0003082!2.67e-14!61;UBERON:0004290!3.12e-13!70;UBERON:0000948!8.95e-13!24;UBERON:0005498!8.95e-13!24;UBERON:0004140!8.95e-13!24;UBERON:0009881!8.95e-13!24;UBERON:0004141!8.95e-13!24;UBERON:0003084!8.95e-13!24;UBERON:0007005!8.95e-13!24;UBERON:0004139!8.95e-13!24;UBERON:0004291!8.95e-13!24;UBERON:0000478!2.81e-11!24;UBERON:0000914!8.53e-11!83;UBERON:0002329!8.53e-11!83;UBERON:0003077!8.53e-11!83;UBERON:0003059!8.53e-11!83;UBERON:0007282!8.53e-11!83;UBERON:0009618!8.53e-11!83;UBERON:0007285!8.53e-11!83;UBERON:0001637!9.44e-11!42;UBERON:0003509!9.44e-11!42;UBERON:0004572!9.44e-11!42;UBERON:0001009!2.24e-10!113;UBERON:0000486!2.60e-10!82;UBERON:0003914!3.71e-10!118;UBERON:0001981!1.42e-09!60;UBERON:0007500!1.42e-09!60;UBERON:0004537!1.42e-09!60;UBERON:0006965!1.42e-09!60;UBERON:0005631!3.04e-09!14;UBERON:0000158!3.04e-09!14;UBERON:0004535!4.23e-09!110;UBERON:0000468!9.94e-09!659;UBERON:0004573!5.07e-08!33;UBERON:0004571!5.07e-08!33;UBERON:0004923!8.52e-08!57;UBERON:0000055!1.23e-07!69;UBERON:0005256!2.00e-07!143;UBERON:0002100!2.82e-07!216;UBERON:0002049!5.27e-07!79;UBERON:0007798!5.27e-07!79 | |ontology_enrichment_uberon=UBERON:0004872!5.69e-18!84;UBERON:0002385!2.12e-15!63;UBERON:0001015!2.12e-15!63;UBERON:0000383!2.12e-15!63;UBERON:0007100!6.18e-15!27;UBERON:0001134!2.67e-14!61;UBERON:0002036!2.67e-14!61;UBERON:0003082!2.67e-14!61;UBERON:0004290!3.12e-13!70;UBERON:0000948!8.95e-13!24;UBERON:0005498!8.95e-13!24;UBERON:0004140!8.95e-13!24;UBERON:0009881!8.95e-13!24;UBERON:0004141!8.95e-13!24;UBERON:0003084!8.95e-13!24;UBERON:0007005!8.95e-13!24;UBERON:0004139!8.95e-13!24;UBERON:0004291!8.95e-13!24;UBERON:0000478!2.81e-11!24;UBERON:0000914!8.53e-11!83;UBERON:0002329!8.53e-11!83;UBERON:0003077!8.53e-11!83;UBERON:0003059!8.53e-11!83;UBERON:0007282!8.53e-11!83;UBERON:0009618!8.53e-11!83;UBERON:0007285!8.53e-11!83;UBERON:0001637!9.44e-11!42;UBERON:0003509!9.44e-11!42;UBERON:0004572!9.44e-11!42;UBERON:0001009!2.24e-10!113;UBERON:0000486!2.60e-10!82;UBERON:0003914!3.71e-10!118;UBERON:0001981!1.42e-09!60;UBERON:0007500!1.42e-09!60;UBERON:0004537!1.42e-09!60;UBERON:0006965!1.42e-09!60;UBERON:0005631!3.04e-09!14;UBERON:0000158!3.04e-09!14;UBERON:0004535!4.23e-09!110;UBERON:0000468!9.94e-09!659;UBERON:0004573!5.07e-08!33;UBERON:0004571!5.07e-08!33;UBERON:0004923!8.52e-08!57;UBERON:0000055!1.23e-07!69;UBERON:0005256!2.00e-07!143;UBERON:0002100!2.82e-07!216;UBERON:0002049!5.27e-07!79;UBERON:0007798!5.27e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.01e-15;25!UBERON:0000948;2.89e-13;22!UBERON:0000478;6.62e-13;24!UBERON:0001637;3.65e-08;42!UBERON:0003509;3.65e-08;42!UBERON:0004572;3.65e-08;42!UBERON:0005631;7.79e-08;10!UBERON:0000158;7.79e-08;10!UBERON:0004573;2.74e-07;33!UBERON:0004571;2.74e-07;33 | |||
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| ||
|short_description=p1@HAND2 | |short_description=p1@HAND2 | ||
}} | }} |
Latest revision as of 19:34, 16 September 2015
Short description: | p1@HAND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HAND2_5end |
Coexpression cluster: | C4394_neuroblastoma_Mesenchymal_rectum_heart_neuroectodermal_leiomyoma_gall |
Association with transcript: | 0bp_to_ENST00000359562, ENST00000535864, NM_021973, uc003ith.1_5end |
EntrezGene: | HAND2 |
HGNC: | 4808 |
UniProt: | P61296B3KV85B6ECG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 2.58e-14 | 55 |
smooth muscle cell | 1.55e-13 | 43 |
smooth muscle myoblast | 1.55e-13 | 43 |
muscle precursor cell | 2.37e-13 | 58 |
myoblast | 2.37e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.37e-13 | 58 |
electrically responsive cell | 2.03e-11 | 61 |
electrically active cell | 2.03e-11 | 61 |
fibroblast | 4.47e-11 | 76 |
extraembryonic cell | 1.07e-10 | 19 |
vascular associated smooth muscle cell | 1.19e-09 | 32 |
cardiocyte | 1.20e-08 | 16 |