FFCP PHASE1:Hg19::chr15:89678391..89678395,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:89678391..89678395,+
|short_description=p@chr15:89678391..89678395,+
|description=CAGE_peak_at_chr15:89678391..89678395,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:89678391..89678395,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr15:89678391..89678395,+ | |||
|id=chr15:89678391..89678395,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.45e-08!76;CL:0000839!1.90e-07!70;CL:0000738!5.58e-07!140;CL:0000037!6.64e-07!172;CL:0000566!6.64e-07!172;CL:0000763!6.96e-07!112;CL:0000049!6.96e-07!112;CL:0000557!8.53e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.07e-19;3!CL:0000094;7.04e-13;8!CL:0000081;2.18e-09;11!CL:0000226;1.05e-08;3!CL:0000842;1.05e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.08e-19,3;CL:0000094,7.07e-13,8;CL:0000081,2.19e-09,11;CL:0000226,5.85e-09,3;CL:0000842,5.85e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.05e-08;3!UBERON:0005425;1.53e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.84e-07;1!DOID:1357;3.84e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.21e-07,1;DOID:1357,3.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-19!115;UBERON:0001049!4.20e-13!57;UBERON:0005068!4.20e-13!57;UBERON:0006241!4.20e-13!57;UBERON:0007135!4.20e-13!57;UBERON:0002616!4.65e-12!59;UBERON:0000955!2.75e-11!69;UBERON:0006238!2.75e-11!69;UBERON:0002780!1.89e-10!41;UBERON:0001890!1.89e-10!41;UBERON:0006240!1.89e-10!41;UBERON:0002020!2.99e-10!34;UBERON:0003528!2.99e-10!34;UBERON:0003075!3.22e-10!86;UBERON:0007284!3.22e-10!86;UBERON:0001017!4.11e-10!82;UBERON:0002346!4.18e-10!90;UBERON:0003080!5.68e-10!42;UBERON:0005743!1.54e-09!86;UBERON:0002619!3.89e-09!22;UBERON:0001950!4.71e-09!20;UBERON:0001893!1.13e-08!34;UBERON:0001869!1.26e-08!32;UBERON:0000073!1.49e-08!94;UBERON:0001016!1.49e-08!94;UBERON:0002791!1.95e-08!33;UBERON:0000956!2.33e-07!25;UBERON:0000203!2.33e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;3.70e-11;13!UBERON:0004733;6.26e-08;12!UBERON:0002028;6.26e-08;12!UBERON:0000941;1.53e-07;1!UBERON:0001785;1.53e-07;1!UBERON:0002464;1.53e-07;1!UBERON:0004904;1.53e-07;1!UBERON:0001021;1.53e-07;1!UBERON:0001764;3.84e-07;1!UBERON:0001825;3.84e-07;1!UBERON:0002784;9.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004732,3.55e-11,13;UBERON:0000073,6.47e-09,53;UBERON:0002616,6.47e-09,53;UBERON:0001049,2.34e-08,56;UBERON:0005068,2.34e-08,56;UBERON:0006241,2.34e-08,56;UBERON:0007135,2.34e-08,56;UBERON:0004733,6.39e-08,12;UBERON:0002028,6.39e-08,12;UBERON:0007277,6.39e-08,12;UBERON:0000941,1.27e-07,1;UBERON:0001785,1.27e-07,1;UBERON:0002464,1.27e-07,1;UBERON:0004904,1.27e-07,1;UBERON:0001021,1.27e-07,1;UBERON:0003902,1.27e-07,1;UBERON:0005425,1.27e-07,1;UBERON:0001764,3.21e-07,1;UBERON:0001825,3.21e-07,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,2.80762226458198,1.95309783644267,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.564727018627814,0,0.224723484445085,0.306083892370903,0,0,0,0.997318288108159,0,0,0,0,1.50749199154046,0.521482918420201,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.48217676009124,0,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0.786021525498329,0,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0.25618263945135,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06976078313403,0.289648807765598,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0,0,0,0.392937226493138,0,0.370784442784429,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,0,0.441463099414651,0.245976877086227,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0.468008530278475,0,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.621984346622316,0.432359860250884,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0.61642896765115,0,0,0.788123040807709,1.2937654491571,0.898401253958239,0,0,0,0,0,11.2351053592077,32.9077605124427,5.38740167466846,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.6541442089831,1.94142780736755,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0,0.275673144969061,0.107420244868274,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0.284567373393656,0,0,0,0.211673582723883,0,0,0.456469358066384,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,2.43410110628385,0.33307196799782,1.4098700508785,0,0.586032717087576,0.121360521749513,0.222886768554957,0.284136146806413,0,0,0,0.994147647766298,0.422008249231538,0.111308705022906,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0.179736702294654,1.61119057208048,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0.236387681767936,1.03423011972439,0.291604613383254,0.347249989866585,0,0.60298219312704,1.52581736317083,1.87984741883082,0.591095237907095,0.658156191461918,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0.265372693510018,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0.61214552326098,0.189559738885464,0,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0,0.873633341210151,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0.316553979779393,0.195551382734803,0,0.85381197895741,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0,0,0.837847203816763,0.916641696046735,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,1.59045937961861,0,0,0,0,0.674921674654501,0,0.121499113316049,0,0.236417121897595,0,0.316801009558219,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0,0.293104467356165,0,1.16354660725395,0.66116300871345,0.513260513652988,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,1.57054096250234,0.886068179966986,0.366078794705889,0.3755727921195,1.14681839138014,0,0.18628920882415,0,0,0,0.285465333544967,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0.352675943690684,0,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| ||
|short_description=p@chr15:89678391..89678395,+ | |||
}} | }} |
Latest revision as of 05:17, 25 July 2015
Short description: | p@chr15:89678391..89678395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:89678391..89678395, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.08e-19 | 3 |
granulocyte | 7.07e-13 | 8 |
blood cell | 2.19e-09 | 11 |
single nucleate cell | 5.85e-09 | 3 |
mononuclear cell | 5.85e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of nervous system | 3.55e-11 | 13 |
regional part of nervous system | 6.47e-09 | 53 |
regional part of brain | 6.47e-09 | 53 |
neural tube | 2.34e-08 | 56 |
neural rod | 2.34e-08 | 56 |
future spinal cord | 2.34e-08 | 56 |
neural keel | 2.34e-08 | 56 |
segmental subdivision of hindbrain | 6.39e-08 | 12 |
hindbrain | 6.39e-08 | 12 |
presumptive hindbrain | 6.39e-08 | 12 |
cranial nerve II | 1.27e-07 | 1 |
cranial nerve | 1.27e-07 | 1 |
nerve trunk | 1.27e-07 | 1 |
nerve connecting eye with brain | 1.27e-07 | 1 |
nerve | 1.27e-07 | 1 |
retinal neural layer | 1.27e-07 | 1 |
presumptive neural retina | 1.27e-07 | 1 |
maxillary sinus | 3.21e-07 | 1 |
paranasal sinus | 3.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.21e-07 | 1 |
maxillary sinus cancer | 3.21e-07 | 1 |